EY711199

Overview
NameEY711199
Unique NameEY711199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF3_MALDO (Profilin-3 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMCDIDG+ LT+AAI+G DGSVW+QS++FP   P
Sbjct:    1 MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSASFPAFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_PRUAV (Profilin OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMCDIDG+ LT+AAI+G DGSVW+QS+ FP   P
Sbjct:    1 MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_DAUCA (Profilin OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGH---HLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMC++DG+    L++AAI+GHDGSVWAQSS FP+  P
Sbjct:    1 MSWQTYVDDHLMCEVDGNPGQQLSAAAIIGHDGSVWAQSSTFPKFKP 47          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_ARTVU (Profilin-1 OS=Artemisia vulgaris PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQVIPN 216
            MSWQTYVDDHLMCDI+G   HLTSAAI G DG+VWA+S++FP+  PN
Sbjct:    1 MSWQTYVDDHLMCDIEGTGQHLTSAAIFGTDGTVWAKSASFPEFKPN 47          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_PRUDU (Profilin OS=Prunus dulcis PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.618e-13
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHLMCDIDG+ LT+AAI+G DGSVW+QS+ FP   P
Sbjct:    1 MSWQQYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_SOYBN (Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.618e-13
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVDDHL+C I+G+HLT AAI+G DGSVW QS++FPQ  P
Sbjct:    1 MSWQAYVDDHLLCGIEGNHLTHAAIIGQDGSVWLQSTDFPQFKP 44          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_BETVE (Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.950e-13
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTS--AAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVD+HLMCDIDG    S  +AIVGHDGSVWAQSS+FPQ  P
Sbjct:    1 MSWQTYVDEHLMCDIDGQASNSLASAIVGHDGSVWAQSSSFPQFKP 46          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF1_CITSI (Profilin OS=Citrus sinensis PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.950e-13
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFP 201
            MSWQ YVDDHLMCDIDG+ LT+AAI+G DGSVW+QS+ FP
Sbjct:    1 MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFP 40          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF_HELAN (Profilin OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQ YVD+HLMCDI+G   HLTSAAI+G DG+VWAQS+ FPQ  P
Sbjct:    1 MSWQAYVDEHLMCDIEGTGQHLTSAAILGLDGTVWAQSAKFPQFKP 46          
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_ARTVU (Profilin-2 OS=Artemisia vulgaris PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 1
Query:   82 MSWQTYVDDHLMCDID--GHHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLMCDI+  G HLT+AAI+G DG+VWA+S  FP+  P
Sbjct:    1 MSWQTYVDDHLMCDIEGTGQHLTAAAILGLDGTVWAKSDKFPEFKP 46          
The following BLAST results are available for this feature:
BLAST of EY711199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PROF3_MALDO4.466e-1372.73Profilin-3 OS=Malus domestica PE=1 SV=1[more]
PROF_PRUAV5.833e-1372.73Profilin OS=Prunus avium PE=1 SV=1[more]
PROF_DAUCA5.833e-1370.21Profilin OS=Daucus carota PE=1 SV=1[more]
PROF1_ARTVU5.833e-1372.34Profilin-1 OS=Artemisia vulgaris PE=1 SV=3[more]
PROF_PRUDU7.618e-1372.73Profilin OS=Prunus dulcis PE=1 SV=1[more]
PROF2_SOYBN7.618e-1370.45Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1[more]
PROF_BETVE9.950e-1376.09Profilin OS=Betula verrucosa GN=BETVII PE=1 SV=1[more]
PROF1_CITSI9.950e-1377.50Profilin OS=Citrus sinensis PE=1 SV=2[more]
PROF_HELAN4.938e-1271.74Profilin OS=Helianthus annuus PE=1 SV=1[more]
PROF2_ARTVU8.423e-1269.57Profilin-2 OS=Artemisia vulgaris PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-A04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711199 ID=EY711199; Name=EY711199; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGCGAGGGGAAGGAATTAACATAGGAATTAAACAAACAATT
GAATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACATACG
TTGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCAGCT
GCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCC
TCAGGTTATACCAAATCTCTCTTGTTTATCTCTTCGATTTTATTTACCGA
TCTGTTATTAATTTATTGTTACGTTCCATTTTCTAATTGCACGGATCTGA
TTGTTCCAATTTTTATTTTTTTTGGCTTAATTGATAATTATTAGCATTCA
GATTAGTTTGTTGCCATGATTTGAATCAAAAGTAAAAATGAAAATGTTAG
ATTTACGTTTTTAGATTGTAAAAATTAAGAATTTTACTGAAAACCAGAAT
AAATTATGAAACTGTAAGTATAAAAATCAAAACTTGTATATGATGATATA
GGTTGTATTTGCTTGTGGCTTTACAATGACCATTTCGTAATTCACTATTA
ATCTTGAGAAAATTATAGAATTTTCAAATAAAAAATAGATAAAAAAAAAT
GTGTTGCTAATGTTAAGACTGTCAAGGGCATGTTTGTTAATGTTGAGTTT
CTGATAATTTTGCAAACACACAGCTAAGTGNTTATGAGCACTCAGTCTCT
AATGATTCCATTCCACACAGCTGTGGCTTAAAAGCATATCTCCTCATTCC
AAGATAATTAAATGATTTGGAGATTTTTATTTTTGGGTTTCATATGCAAT
TTATTGGTTTGTTCCAGAATTTTTGTTGNAAATGCTATCAGGAACTTTCT
CAATCTCAAATACAAATTTATTTNC
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