EY711199

Overview
NameEY711199
Unique NameEY711199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF3_TOBAC (Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.437e-11
Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDGH--HLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLM D +G   HL +AAI+GHDGSVWAQS +FP+  P
Sbjct:    1 MSWQTYVDDHLMVDFEGQGQHLAAAAILGHDGSVWAQSPHFPKFKP 46
[Close]
BLAST of EY711199 vs. ExPASy Swiss-Prot
Match: PROF2_TOBAC (Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.876e-11
Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 1 
Query:   82 MSWQTYVDDHLMCDIDG---HHLTSAAIVGHDGSVWAQSSNFPQVIP 213
            MSWQTYVDDHLM DI+G   +HL +AAI+G+DGSVWAQS+ FP+  P
Sbjct:    1 MSWQTYVDDHLMADIEGQQGNHLAAAAILGNDGSVWAQSTTFPKFKP 47
The following BLAST results are available for this feature:
BLAST of EY711199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PROF3_TOBAC1.437e-1169.57Profilin-3 OS=Nicotiana tabacum GN=PRO3 PE=2 SV=1[more]
PROF2_TOBAC1.876e-1168.09Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-005-A04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711199 ID=EY711199; Name=EY711199; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGCGAGGGGAAGGAATTAACATAGGAATTAAACAAACAATT
GAATTTGCCGTGAGAATTTAGATTGTTGAAAATGTCGTGGCAAACATACG
TTGATGATCATCTGATGTGCGATATCGACGGCCATCATCTCACCTCAGCT
GCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCTCCAATTTCCC
TCAGGTTATACCAAATCTCTCTTGTTTATCTCTTCGATTTTATTTACCGA
TCTGTTATTAATTTATTGTTACGTTCCATTTTCTAATTGCACGGATCTGA
TTGTTCCAATTTTTATTTTTTTTGGCTTAATTGATAATTATTAGCATTCA
GATTAGTTTGTTGCCATGATTTGAATCAAAAGTAAAAATGAAAATGTTAG
ATTTACGTTTTTAGATTGTAAAAATTAAGAATTTTACTGAAAACCAGAAT
AAATTATGAAACTGTAAGTATAAAAATCAAAACTTGTATATGATGATATA
GGTTGTATTTGCTTGTGGCTTTACAATGACCATTTCGTAATTCACTATTA
ATCTTGAGAAAATTATAGAATTTTCAAATAAAAAATAGATAAAAAAAAAT
GTGTTGCTAATGTTAAGACTGTCAAGGGCATGTTTGTTAATGTTGAGTTT
CTGATAATTTTGCAAACACACAGCTAAGTGNTTATGAGCACTCAGTCTCT
AATGATTCCATTCCACACAGCTGTGGCTTAAAAGCATATCTCCTCATTCC
AAGATAATTAAATGATTTGGAGATTTTTATTTTTGGGTTTCATATGCAAT
TTATTGGTTTGTTCCAGAATTTTTGTTGNAAATGCTATCAGGAACTTTCT
CAATCTCAAATACAAATTTATTTNC
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