EY711190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_SYNY3 (Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803) GN=cry PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.709e-32 Identity = 82/227 (36.12%), Postives = 125/227 (55.07%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL--KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 718 SP L G +S R ++ V+ E + ++S + + + R++ R+++ Y ++ G L K F W D+ F+ WR G+TGYPLVDA MREL TG++ +R R V+SF K L + WRWG ++F L+D D+ S+ W Y +G D R F + P+ + ++DP G Y+R WLPEL LP + IH PW + + G++LG +YP P V Sbjct: 253 SPWLALGCLSPRFIYQEVK------RYEQERVSNDSTHWLIFELLWRDFFRFVA--QKYGNKLFNRGGLLNKNFPWQEDQVRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARDFRYFNIPK-QSQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATEQKQWGVQLGVDYPRPCV 470
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: PHR_HALSA (Deoxyribodipyrimidine photo-lyase OS=Halobacterium salinarium GN=phr PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.756e-31 Identity = 77/229 (33.62%), Postives = 122/229 (53.28%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLRE-YSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIH--HPWNAPESVLQAAGIELGSNYPFPIV 718 LSPHL FG + +R V+ R + + + E+V F+ + RE Y++ + FN E + W D +AW+ G TGYP+VDAGMR+L A ++H+R+R++V++F K L + WR G +F + L D D +D GWQ+ + T D + + R+ NP +G ++DP+ +Y+ ++PEL +P + IH H + E A YP PIV Sbjct: 243 LSPHLKFGTIGIRTVYEAARAAKSDADTDDER---ENVAAFIGQLAWREFYAQVLYFNQNVVSEN-FKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIVAAFLTKDLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGERYDPDADYITEFVPELRDVPADAIHSWHELSLSERRRHA------PEYPDPIV 461
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_RHOBA (Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 5.108e-31 Identity = 87/234 (37.18%), Postives = 118/234 (50.43%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFS--WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRI-DAAK 736 SP L G +S R + VR E + ++S + + R+Y R++S H + R G L+ + W D F+ W+ G TGYPLVDA MREL TG++ +R R V+SF K L + WRWG ++F L+D D+ S+ W Y +G D R F R N + +D GEY + WLPEL L IH PW Q G LG YP PIV + D+AK Sbjct: 250 SPWLAQGCLSPRMIADHVR------RYEEERVKNKSTYWMIFELLWRDYFRWISRKHGATLFRA--GGLRGVNVDWKSDRELFRRWQDGTTGYPLVDANMRELRTTGYMSNRGRQNVASFLTKNLGIDWRWGARWFESQLVDYDVASNYGNWNYAAGVGNDARGF-RFFNITKQSRDYDSQGEYAKHWLPELRDLDVTEIHEPWKMSPERQQEVGATLGKEYPHPIVDLFDSAK 474
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_NATPD (Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.311e-30 Identity = 71/202 (35.15%), Postives = 105/202 (51.98%), Query Frame = 2 Query: 125 EGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDA 730 E + +E + + R++ ++ + + +P + W D F+ W G TG P VDA MREL TG++ +R R V+SF VL + WRWG YF L+D D+ S+ W Y +G D R DR + + + ++D + EY+ WLPELA LP H PW E+ + G+ELG +YP P+V IDA Sbjct: 270 EDERVANEDTYWLVFELAWRDFFQFQFEKYGATFFKPGGIRERNIDWDRDRALFERWADGETGVPFVDANMRELNRTGYMSNRGRQNVASFLAGVLGIDWRWGAAYFEARLIDYDVASNWGNWAYQAGVGNDSR--DRYFDVRSQAERYDSDAEYITTWLPELAALPATIAHQPWQLSEAEQREYGVELGVDYPEPVVDIDA 469
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: PHR_BUCBP (Deoxyribodipyrimidine photo-lyase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=phrB PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.376e-30 Identity = 74/236 (31.36%), Postives = 124/236 (52.54%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLV---------RIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKF-FSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 718 LS HL G +S R+ L+ ++++ W NE + RE+ +++ + +P + L H + W + Y W+QG TGYP++DAGMR+L GW+ +R+R++ +SF VK L + WR G +YF L+D D S+ WQ+I+ D + RI NP + KFD N +++R+++PEL+ + T IH+P + ++ ++ S YP PI+ Sbjct: 242 LSAHLSIGVISPRQCVTLLFKEYPDIIHKLEECKWINE---------------LLWREFYQHLLYFYPNIGQNQSLYHWENRIKWDNNLYYLNLWKQGNTGYPIIDAGMRQLKQLGWISNRLRMITASFLVKNLLIDWRKGEEYFMSQLIDGDFASNNGNWQWIASVGTDSMPYFRIFNPMLQSKKFDINAKFIRKYIPELSNVSTYNIHNPCDNNKT------NKIHSKYPQPII 456
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_AEDAE (Cryptochrome-1 OS=Aedes aegypti GN=cry PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.376e-30 Identity = 81/243 (33.33%), Postives = 130/243 (53.50%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI------DNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAA 733 +S L FG +SVR + V ++V N+ G + + + REY MS ++P+ E P+ ++ ++ D W++GRTG+P++DA MR+L A GWLH +R + ++F + L + W G+++F LLDAD A W ++S + AF+++ +P + DP GEYVRR+LPEL LPT ++H PW AP V + G +G +YP P++ + AA Sbjct: 265 MSAALRFGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHIT---GQLIWREYFYTMSVHNPHYAEMEANPICLNIPWYEPKDDS--LDRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATFLTRGALWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSS-----AFEKLLDSSSCTSPIALARRLDPKGEYVRRYLPELKNLPTLYVHEPWKAPLDVQKECGCIVGRDYPAPMIDLAAA 497
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: PHR_SYNP6 (Deoxyribodipyrimidine photo-lyase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=phr PE=1 SV=4) HSP 1 Score: 130.954 bits (328), Expect = 9.633e-30 Identity = 75/226 (33.19%), Postives = 117/226 (51.77%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 718 LSP L FG + +R+ + R + A + S+ ++ + + RE+ ++ ++ P + P + F W E F AW Q +TGYP+VDA MR+L TGW+H+R ++V+SF K L + WR G ++F L+D DL ++ GWQ+ + + D + RI NP + KFD Y++RWLPEL + HP + + G YP PIV Sbjct: 243 LSPALKFGAIGIRQAW---RAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADGPYRSLWQQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCWMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKPL-RIFNPASQAKKFDATATYIKRWLPELRHV------HPKDLISGEITPIG---RRGYPAPIV 455
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: PHR_THET8 (Deoxyribodipyrimidine photo-lyase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=phr PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.146e-29 Identity = 70/190 (36.84%), Postives = 103/190 (54.21%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPE 610 LSP+ G +S R +W E + G E ++ + R++S ++ ++ P+ ERPL + F W DE F+AW +G+TG PLVDA MREL ATG+L +R R+ + F VK L LPW+ + F LLD D + GWQ+ G D + R+ NP +G + DP G +++RW PE Sbjct: 212 LSPYFALGVLSPRLA---------AW--EAERRGGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQAFPWQEDEALFQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPE 390
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: PHR_THET2 (Deoxyribodipyrimidine photo-lyase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=phr PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.661e-29 Identity = 70/190 (36.84%), Postives = 102/190 (53.68%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPE 610 LSP+ G +S R +W E + G E ++ + R++S ++ ++ P+ ERPL + W DE F+AW +GRTG PLVDA MREL ATG+L +R R+ + F VK L LPW+ + F LLD D + GWQ+ G D + R+ NP +G + DP G +++RW PE Sbjct: 212 LSPYFALGVLSPRLA---------AW--EAERRGGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQALPWQEDEALFRAWYEGRTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPE 390
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.244e-29 Identity = 67/176 (38.07%), Postives = 95/176 (53.98%), Query Frame = 2 Query: 263 WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQEAASR 790 W D F+ WR G+TG+PLVDA MREL ATG++ +R R V+SF K L + W G ++F L+D D+ S+ W Y +G D R F R N + +DP+G YV+ WLPELA LP +H PW + G+ LG +YP P+V + + + + W+ R Sbjct: 318 WKEDWERFELWRTGQTGFPLVDANMRELAATGFMSNRGRQNVASFLTKNLGIHWHMGAEWFESRLIDYDVASNWGNWNYTAGVGNDARGF-RFFNILKQARDYDPDGAYVKHWLPELAGLPPARVHEPWKLLPVEQKRFGVRLGVDYPQPVVDLFQSAAANEAIYNAAWEHHHRKR 492 The following BLAST results are available for this feature:
BLAST of EY711190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711190 ID=EY711190; Name=EY711190; organism=Citrus sinensis; type=EST; length=920bpback to top |