EY711190

Overview
NameEY711190
Unique NameEY711190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_CULQU (Cryptochrome-1 OS=Culex quinquefasciatus GN=cry PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.904e-28
Identity = 78/248 (31.45%), Postives = 125/248 (50.40%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWV-VDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI------DNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRI-DAAKCRLDE 751
            +S  L FG +SVR  +  V     +V   N+    G   +      +  REY   MS ++P+     L        W    +     W++GRTG+PL+DA MR+L A GWLH  +R + ++F  +  L + W  G+++F   LLDAD    A  W ++S +     AF+++       +P     + DP GEYV+R+LPEL + P  ++H PW AP  + +  G  +G +YP P+V + +  KC  ++
Sbjct:  219 MSAALRFGCLSVRMFYWCVHDLFARVQANNQLKHPGGHHIT---GQLIWREYFYTMSVHNPHYAVMELNPICLNIPWYEAKDDSLDRWKEGRTGFPLIDAAMRQLMAEGWLHHILRNITATFLTRGGLWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSS-----AFEKLLDSSSCTSPVALARRLDPKGEYVKRYLPELEKFPALYVHEPWKAPPELQEQYGCVIGKDYPAPMVNLAEVNKCNANK 458          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: PHR_BUCAI (Deoxyribodipyrimidine photo-lyase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=phrB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.009e-27
Identity = 62/188 (32.98%), Postives = 104/188 (55.32%), Query Frame = 2
Query:  182 REYSRYMSFNHP-YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIH--HPWNAPESVLQAAGIELGSNYPFPIVRIDAAK 736
            RE+  ++    P  S    L+   K   W+ +  +F AW++G TG+P++DAGMR+L   GW+H+R+R++ SSF VK L + WR G ++F   L+D DL  +  GWQ+ +    D   + RI NP  +   FD +G ++++++PEL  +P   IH  H W+  ++           +YP PI+    ++
Sbjct:  282 REFYYHLLIGFPKISRSESLVTWEKEIHWINNIKHFNAWKEGNTGFPIIDAGMRQLNELGWMHNRLRMITSSFLVKNLLINWREGEEHFISNLIDGDLALNNGGWQWSASVGCDSVPYIRIFNPLHQSKTFDESGNFIKKFIPELKNVPNHHIHQPHEWSKQKN--------FKIDYPNPIINYSESR 461          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_DANRE (Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.623e-27
Identity = 77/227 (33.92%), Postives = 117/227 (51.54%), Query Frame = 2
Query:   44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL--KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 718
            SP L  G +S R ++  ++  +V       +  ++S    +  +  R+Y ++++    Y +    +  L  K   W  D   F AW++GRTG P VDA MREL  TG++ +R R  V+SF  K L L WR G ++F   L+D D+ S+   W Y +G   D R  +R  N   +G  +D NG+YVR+W+PEL  +    +H PW    S L  A + L   YP PI+
Sbjct:  256 SPWLALGCISPRYIYEQIKKYEVE------RTANQSTYWVIFELLWRDYFKFVALK--YGNRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVPFVDANMRELALTGFMSNRGRQNVASFLTKDLGLDWRLGAEWFEYLLVDHDVCSNYGNWLYSAGIGNDPRE-NRKFNMIKQGLDYDNNGDYVRQWVPELRGIKGGDVHTPWTLSNSALSHAQVSLNQTYPCPII 473          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_XENLA (Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.969e-27
Identity = 79/248 (31.85%), Postives = 122/248 (49.19%), Query Frame = 2
Query:   44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL--KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQEA 781
            +P L  G VS R ++  +         E  +  ++S    +  +  R+Y R+++    Y      L  L  K   W  D   F AW++GRTG P VDA MREL  TG++ +R R  V+SF  K L + WR G ++F   L+D D+ S+   W Y +G   D R  +R  N   +G  +D  G+Y+R W+PEL ++     H PW    + L  A + LG  YP+PIV        +++  +  W++ A
Sbjct:  257 APWLALGCVSPRYIYEQIG------KYEKERTANQSTYWVIFELLWRDYFRFVALK--YGRRIFFLRGLQDKDIPWKRDPKLFDAWKEGRTGVPFVDANMRELAMTGFMSNRGRQNVASFLTKDLGIDWRMGAEWFEYLLVDYDVCSNYGNWLYSAGIGNDPRE-NRKFNMIKQGLDYDSGGDYIRLWVPELQQIKGGDAHTPWALSNASLAHANLSLGETYPYPIVMAPEWSRHINQKPAGSWEKSA 495          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_CHICK (Cryptochrome-1 OS=Gallus gallus GN=CRY1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.302e-26
Identity = 82/246 (33.33%), Postives = 123/246 (50.00%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQ 775
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S +    + F     P   G + DPNG+Y+RR+LP L   P ++I+ PWNAPESV +AA   +G NYP P+V    A     E + +++QQ
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPMVNHAEASRLNIERMKQIYQQ 490          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_SYLBO (Cryptochrome-1 OS=Sylvia borin GN=CRY1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.221e-26
Identity = 81/246 (32.93%), Postives = 123/246 (50.00%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQ 775
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S +    + F     P   G + DPNG+Y+RR+LP L   P ++I+ PWNAPES+ +AA   +G NYP P+V    A     E + +++QQ
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESIQKAAKCIIGVNYPKPMVNHAEASRLNIERMKQIYQQ 490          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_ERIRU (Cryptochrome-1 OS=Erithacus rubecula GN=CRY1 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.221e-26
Identity = 81/246 (32.93%), Postives = 123/246 (50.00%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQ 775
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S +    + F     P   G + DPNG+Y+RR+LP L   P ++I+ PWNAPES+ +AA   +G NYP P+V    A     E + +++QQ
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESIQKAAKCIIGVNYPKPMVNHAEASRLNIERMKQIYQQ 490          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_ANOGA (Cryptochrome-1 OS=Anopheles gambiae GN=Cry1 PE=2 SV=4)

HSP 1 Score: 117.472 bits (293), Expect = 1.102e-25
Identity = 75/238 (31.51%), Postives = 121/238 (50.84%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDN------PQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIV 718
            +S  L FG +SVR  +  V     +V   ++    G   +      +  REY   MS  +P+  E    P+  ++ ++    ++     W++GRTG+P++DA MR+L A GWLH  +R + ++F  +  L L W  G+++F   LLDAD    A  W ++S +     AF+R+ +      P     + DP G+YV+R+LPELA  P +++H PW A        G  +G  YP P+V
Sbjct:  266 MSAALRFGCLSVRMFYWCVHDLFAKVQSNSQFKYPGGHHIT---GQLIWREYFYTMSVQNPHYGEMERNPICLNIPWYK--PEDDSLTRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATFLTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSS-----AFERLLDSSKCTCPIALARRLDPKGDYVKRYLPELANYPAQFVHEPWKASREQQIEYGCVIGEKYPAPMV 493          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_RAT (Cryptochrome-1 OS=Rattus norvegicus GN=Cry1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.880e-25
Identity = 79/246 (32.11%), Postives = 121/246 (49.19%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQ 775
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S +    + F     P   G + DPNG+Y+RR+LP L   P ++I+ PWNAPE + + A   +G NYP P+V    A     E + +++QQ
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQ 490          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_MOUSE (Cryptochrome-1 OS=Mus musculus GN=Cry1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.880e-25
Identity = 79/246 (32.11%), Postives = 121/246 (49.19%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQ 775
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S +    + F     P   G + DPNG+Y+RR+LP L   P ++I+ PWNAPE + + A   +G NYP P+V    A     E + +++QQ
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQ 490          
The following BLAST results are available for this feature:
BLAST of EY711190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CRY1_CULQU6.904e-2831.45Cryptochrome-1 OS=Culex quinquefasciatus GN=cry PE... [more]
PHR_BUCAI2.009e-2732.98Deoxyribodipyrimidine photo-lyase OS=Buchnera aphi... [more]
CRYD_DANRE2.623e-2733.92Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 ... [more]
CRYD_XENLA9.969e-2731.85Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE... [more]
CRY1_CHICK1.302e-2633.33Cryptochrome-1 OS=Gallus gallus GN=CRY1 PE=2 SV=1[more]
CRY1_SYLBO2.221e-2632.93Cryptochrome-1 OS=Sylvia borin GN=CRY1 PE=2 SV=1[more]
CRY1_ERIRU2.221e-2632.93Cryptochrome-1 OS=Erithacus rubecula GN=CRY1 PE=2 ... [more]
CRY1_ANOGA1.102e-2531.51Cryptochrome-1 OS=Anopheles gambiae GN=Cry1 PE=2 S... [more]
CRY1_RAT1.880e-2532.11Cryptochrome-1 OS=Rattus norvegicus GN=Cry1 PE=2 S... [more]
CRY1_MOUSE1.880e-2532.11Cryptochrome-1 OS=Mus musculus GN=Cry1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711190 ID=EY711190; Name=EY711190; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCCCACGCGTCTGGCGCTACAACCTCATTTCTCTCTCCAC
ATTTGCATTTTGGGGAGGTTAGTGTGAGGAAAGTCTTCCATCTTGTCCGC
ATCAAGCAGGTTTCATGGGCCAATGAAGGGAACAAGGCTGGTGATGAGAG
TGTGAACTTGTTTCTCAAGTCAATTGGTCTTCGGGAATATTCAAGGTACA
TGAGTTTTAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCACCTT
AAGTTCTTTTCTTGGGTTGTGGATGAGGGCTATTTTAAGGCATGGAGGCA
AGGTAGAACTGGTTATCCACTGGTGGATGCTGGCATGAGAGAGTTGTGGG
CCACTGGTTGGCTTCATGATCGGATACGAGTAGTAGTTTCTAGTTTCTTT
GTAAAAGTTCTACAGCTTCCATGGAGATGGGGGATGAAATATTTTTGGGA
TACCCTCTTGGATGCAGATTTAGAAAGTGATGCTCTTGGTTGGCAGTACA
TATCCGGTACTATCCCTGATGGCCGTGCTTTTGACCGAATTGACAATCCA
CAGTTTGAGGGTTACAAGTTTGACCCCAATGGAGAATATGTACGACGGTG
GCTCCCTGAACTTGCCAGACTGCCCACTGAATGGATACACCACCCATGGA
ATGCACCAGAGTCTGTGCTCCAAGCTGCTGGCATTGAGCTGGGTTCCAAT
TACCCTTTTCCCATAGTACGGATTGACGCAGCAAAATGCAGGCTGGACGA
AGCACTTTCAGAAATGTGGCAGCAAGAAGCAGCTTCAAGAGCTGCCATTG
GAAATGGAACTTGAGGAAAGTCTTGGAGACTCTTCTGACTCGGCCCAATT
GCCTTTCTCCCGACATACAGAGGAAGGAATCCCCTGAACTGCTAAGAACA
ACTTCCTACCCAGGTTCGGG
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