EY711190

Overview
NameEY711190
Unique NameEY711190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_HUMAN (Cryptochrome-1 OS=Homo sapiens GN=CRY1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.880e-25
Identity = 79/246 (32.11%), Postives = 121/246 (49.19%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQ 775
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S +    + F     P   G + DPNG+Y+RR+LP L   P ++I+ PWNAPE + + A   +G NYP P+V    A     E + +++QQ
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQ 490          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_SPAJD (Cryptochrome-1 OS=Spalax judaei GN=CRY1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.207e-25
Identity = 79/246 (32.11%), Postives = 120/246 (48.78%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV-KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQ 775
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F     L + W  GMK F + LLDAD   +A  W ++S +    + F     P   G + DPNG+Y+RR+LP L   P ++I+ PWNAPE + + A   +G NYP P+V    A     E + +++QQ
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQ 490          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_MACFA (Cryptochrome-1 OS=Macaca fascicularis GN=CRY1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.188e-25
Identity = 78/246 (31.71%), Postives = 121/246 (49.19%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQQ 775
            LSP+L FG +S R    L   K      +  +     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S +    + F     P   G + DPNG+Y+RR+LP L   P ++I+ PWNAPE + + A   +G NYP P+V    A     E + +++QQ
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKRNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGINYPKPMVNHAEASRLNIERMKQIYQQ 490          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_SOLLC (Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.219e-24
Identity = 74/210 (35.24%), Postives = 107/210 (50.95%), Query Frame = 2
Query:   44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKF---------FSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHP 646
            SP L  G +S R ++  V+        E  +  ++S    L  +  R+Y R++S           L +L F          +W  D+  F AWR+G+TGYPL+DA M+EL ATG++ +R R +V SF V+ + + WR G ++F   LLD D  S+   W Y +G   D R  DR  +   +   +DP GE+V  WLPEL  LP E  H P
Sbjct:  341 SPWLASGSLSPRFIYEEVK------RYEKERLSNDSTYWVLFELIWRDYFRFLSIK---------LANLLFQAGGPQKVNINWSQDQTMFDAWRRGQTGYPLIDANMKELAATGYMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE-DRYFSIPKQAQNYDPEGEFVAYWLPELRALPREKRHSP 534          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_DROPS (Cryptochrome-1 OS=Drosophila pseudoobscura pseudoobscura GN=cry PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24
Identity = 79/241 (32.78%), Postives = 111/241 (46.06%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVV-DEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDR------IDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAA 733
            +S HL FG +SVR+ +  V    + V  A        E        +  REY   MS N+P               W   DE   + WR G+TG+PL+D  MR+L A GWLH  +R  V++F  +  L   W  G+K+F   LLDAD    A  W ++S +     AF+R      +  P     + DP G Y+RR++PEL  LP E+IH PW             +G +YP  I+ +  A
Sbjct:  266 MSAHLRFGCLSVRRFYWSVHDLFENVQLAACVRGVQIEGGAHITGQLIWREYFYTMSVNNPNYDRMEGNEICLTIPWAKPDENLLQRWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEPGLKHFLKYLLDADWSVCAGNWMWVSSS-----AFERLLDSSLVTCPVALAKRLDPEGVYIRRYVPELKNLPKEYIHEPWRLSAEQQVKFECLIGVHYPERIIDLSKA 501          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY2_RAT (Cryptochrome-2 OS=Rattus norvegicus GN=Cry2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.546e-24
Identity = 63/163 (38.65%), Postives = 97/163 (59.51%), Query Frame = 2
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLD-EALSEMWQQ 775
            W +G+TG+P +DA M +L   GW+H   R  V+ F  +  L + W  G++ F + LLDAD   +A  W ++S +    + F     P   G + DP+G+Y+RR+LP+L   P+ +I+ PWNAPESV +AA   +G +YP PIV   A   RL+ E + +++QQ
Sbjct:  348 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCIIGVDYPRPIVN-HAETSRLNIERMKQIYQQ 508          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY2_MOUSE (Cryptochrome-2 OS=Mus musculus GN=Cry2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.048e-24
Identity = 63/163 (38.65%), Postives = 97/163 (59.51%), Query Frame = 2
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLD-EALSEMWQQ 775
            W +G+TG+P +DA M +L   GW+H   R  V+ F  +  L + W  G++ F + LLDAD   +A  W ++S +    + F     P   G + DP+G+Y+RR+LP+L   P+ +I+ PWNAPESV +AA   +G +YP PIV   A   RL+ E + +++QQ
Sbjct:  348 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPRPIVN-HAETSRLNIERMKQIYQQ 508          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY2_HUMAN (Cryptochrome-2 OS=Homo sapiens GN=CRY2 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 6.048e-24
Identity = 62/163 (38.04%), Postives = 97/163 (59.51%), Query Frame = 2
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLD-EALSEMWQQ 775
            W +G+TG+P +DA M +L   GW+H   R  V+ F  +  L + W  G++ F + LLDAD   +A  W ++S +    + F     P   G + DP+G+Y+RR+LP+L   P+ +I+ PWNAPES+ +AA   +G +YP PIV   A   RL+ E + +++QQ
Sbjct:  349 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRPIVN-HAETSRLNIERMKQIYQQ 509          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY2_CHICK (Cryptochrome-2 OS=Gallus gallus GN=CRY2 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.760e-23
Identity = 62/163 (38.04%), Postives = 97/163 (59.51%), Query Frame = 2
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLD-EALSEMWQQ 775
            W +G+TG+P +DA M +L   GW+H   R  V+ F  +  L + W  G++ F + LLDAD   +A  W ++S +    + F     P   G + DP+G+YV+R+LP+L   P+ +I+ PWNAPESV +AA   +G +YP P+V   A   RL+ E + +++QQ
Sbjct:  339 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQFFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPKPMVN-HAETSRLNIERMKQIYQQ 499          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_ORYSJ (Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.920e-23
Identity = 72/203 (35.47%), Postives = 106/203 (52.22%), Query Frame = 2
Query:   44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFS--WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHP 646
            SP L  G +S R +   V+        E  +  ++S    L  +  R+Y R++S    Y +    LG  +     W  D+  F++WR GRTGYPL+DA M+EL ATG++ +R R +V SF V+ + + WR G ++F   LLD D  S+   W Y +G   D R  DR  +   +   +DP+GEYV  WLPEL  +  E  + P
Sbjct:  351 SPWLASGSLSPRYICEEVK------RYEKQRIANDSTYWVLFELIWRDYFRFISAK--YGNSIFHLGGPRNVESKWSQDQALFESWRDGRTGYPLIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPRE-DRYFSIPKQAKTYDPDGEYVAYWLPELRSIAKERRNFP 544          
The following BLAST results are available for this feature:
BLAST of EY711190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CRY1_HUMAN1.880e-2532.11Cryptochrome-1 OS=Homo sapiens GN=CRY1 PE=1 SV=1[more]
CRY1_SPAJD3.207e-2532.11Cryptochrome-1 OS=Spalax judaei GN=CRY1 PE=2 SV=1[more]
CRY1_MACFA4.188e-2531.71Cryptochrome-1 OS=Macaca fascicularis GN=CRY1 PE=2... [more]
CRYD_SOLLC1.219e-2435.24Cryptochrome DASH, chloroplastic/mitochondrial OS=... [more]
CRY1_DROPS2.715e-2432.78Cryptochrome-1 OS=Drosophila pseudoobscura pseudoo... [more]
CRY2_RAT3.546e-2438.65Cryptochrome-2 OS=Rattus norvegicus GN=Cry2 PE=2 S... [more]
CRY2_MOUSE6.048e-2438.65Cryptochrome-2 OS=Mus musculus GN=Cry2 PE=1 SV=1[more]
CRY2_HUMAN6.048e-2438.04Cryptochrome-2 OS=Homo sapiens GN=CRY2 PE=1 SV=2[more]
CRY2_CHICK1.760e-2338.04Cryptochrome-2 OS=Gallus gallus GN=CRY2 PE=2 SV=2[more]
CRYD_ORYSJ3.920e-2335.47Cryptochrome DASH, chloroplastic/mitochondrial OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711190 ID=EY711190; Name=EY711190; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCCCACGCGTCTGGCGCTACAACCTCATTTCTCTCTCCAC
ATTTGCATTTTGGGGAGGTTAGTGTGAGGAAAGTCTTCCATCTTGTCCGC
ATCAAGCAGGTTTCATGGGCCAATGAAGGGAACAAGGCTGGTGATGAGAG
TGTGAACTTGTTTCTCAAGTCAATTGGTCTTCGGGAATATTCAAGGTACA
TGAGTTTTAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCACCTT
AAGTTCTTTTCTTGGGTTGTGGATGAGGGCTATTTTAAGGCATGGAGGCA
AGGTAGAACTGGTTATCCACTGGTGGATGCTGGCATGAGAGAGTTGTGGG
CCACTGGTTGGCTTCATGATCGGATACGAGTAGTAGTTTCTAGTTTCTTT
GTAAAAGTTCTACAGCTTCCATGGAGATGGGGGATGAAATATTTTTGGGA
TACCCTCTTGGATGCAGATTTAGAAAGTGATGCTCTTGGTTGGCAGTACA
TATCCGGTACTATCCCTGATGGCCGTGCTTTTGACCGAATTGACAATCCA
CAGTTTGAGGGTTACAAGTTTGACCCCAATGGAGAATATGTACGACGGTG
GCTCCCTGAACTTGCCAGACTGCCCACTGAATGGATACACCACCCATGGA
ATGCACCAGAGTCTGTGCTCCAAGCTGCTGGCATTGAGCTGGGTTCCAAT
TACCCTTTTCCCATAGTACGGATTGACGCAGCAAAATGCAGGCTGGACGA
AGCACTTTCAGAAATGTGGCAGCAAGAAGCAGCTTCAAGAGCTGCCATTG
GAAATGGAACTTGAGGAAAGTCTTGGAGACTCTTCTGACTCGGCCCAATT
GCCTTTCTCCCGACATACAGAGGAAGGAATCCCCTGAACTGCTAAGAACA
ACTTCCTACCCAGGTTCGGG
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