EY711190

Overview
NameEY711190
Unique NameEY711190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_ARATH (Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.920e-23
Identity = 74/206 (35.92%), Postives = 104/206 (50.49%), Query Frame = 2
Query:   44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKF-----FSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHP 646
            SP L FG +S R ++  V+        E  +  + S    L  +  R+Y R++S     S     L HL         W  D+  F++WR  +TGYPL+DA M+EL  TG++ +R R +V SF V+ + L WR G ++F   LLD D  S+   W Y +G   D R  DR  +   +   +DP GEYV  WL +L RLP E  H P
Sbjct:  333 SPWLAFGCISPRFIYEEVQ------RYEKERVANNSTYWVLFELIWRDYFRFLSIKCGNS-----LFHLGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE-DRYFSIPKQAQNYDPEGEYVAFWLQQLRRLPKEKRHWP 526          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: PHR_YEAST (Deoxyribodipyrimidine photo-lyase, mitochondrial OS=Saccharomyces cerevisiae GN=PHR1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.687e-23
Identity = 55/158 (34.81%), Postives = 87/158 (55.06%), Query Frame = 2
Query:  143 DESVNLFLKSIGLREYSRYMSFNHPY-SHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPEL 613
            + S   F+K +  R++ R+   N PY S   P         W  +   F+ W  G TG P+VDA MR+L  TG++++R R++ +SF  K L + WRWG ++F   L+D D  S+  GW + S T  D + + R+ N   +  K+DP   +V++W+PEL
Sbjct:  375 NSSTQNFIKEVAWRDFYRHCMCNWPYTSMGMPYRLDTLDIKWENNPVAFEKWCTGNTGIPIVDAIMRKLLYTGYINNRSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVGGWGFCSSTGIDAQPYFRVFNMDIQAKKYDPQMIFVKQWVPEL 532          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY1_DROME (Cryptochrome-1 OS=Drosophila melanogaster GN=cry PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.490e-22
Identity = 73/244 (29.92%), Postives = 116/244 (47.54%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNL-----FLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVV-DEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDR------IDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAA 733
            +S HL FG +SVR+ +  V      + N   +A    V +         +  REY   MS N+P               W   +E   ++WR G+TG+PL+D  MR+L A GWLH  +R  V++F  +  L   W  G+++F   LLDAD    A  W ++S +     AF+R      +  P     + DP+G Y+++++PEL  +P E++H PW       +     +G +YP  I+ +  A
Sbjct:  266 MSAHLRFGCLSVRRFYWSVHDL---FKNVQLRACVRGVQMTGGAHITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSS-----AFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMA 501          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_NEUCR (Putative cryptochrome DASH, mitochondrial OS=Neurospora crassa GN=B22I21.260 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.174e-21
Identity = 51/130 (39.23%), Postives = 77/130 (59.23%), Query Frame = 2
Query:  302 GRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPT-EWIHHPWNAPESVLQAAGIE 688
            G TG  L+DA  REL  TG+  +R R  V+SF  K L++ WR+G +++   L+D D+ S+   WQY++G   D R   RI NP  + + +D +G YVR W+PE+A+    E +   W A +  L+ AG+E
Sbjct:  421 GTTGMGLIDASQRELIHTGYTSNRTRQNVASFLAKHLEIDWRYGAEWYEMLLVDYDVSSNWANWQYVAGVGNDPRGAARIFNPVKQAFDYDKDGTYVRTWVPEVAKFENLENVFQAWTASKEDLKTAGLE 550          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_OSTTA (Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri GN=Ot01g06320 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.821e-20
Identity = 73/227 (32.16%), Postives = 108/227 (47.58%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL-----KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYP 706
            L+P L  G VS R V   +R        E  +  ++S    +  +  R++ ++ +  H        + HL     +  SW  DE   KAW+ G TGYPL+DA MREL ATG++ +R R  V+S+      + WR G  +F   LLD D  S+   W   +G    G   +R  N   +   +DP GEY++ W+ ELA +P  +I  P  AP  +       +G NYP
Sbjct:  283 LAPWLALGCVSPRHVVSEIR------RYESERVENKSTYWVIFELIWRDFFKFFALKHGNK-----IFHLDGTAGRRASWKRDEKILKAWKTGTTGYPLIDANMRELAATGFMSNRGRQNVASWLALDAGIDWRHGADWFEHHLLDYDTASNWGNWCAAAGM--TGGRINRF-NIAKQTKDYDPAGEYIKTWVKELAEVPAAYIADPNQAPRELRD----RIGLNYP 491          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_IDILO (Cryptochrome DASH OS=Idiomarina loihiensis GN=cry PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17
Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 2
Query:  284 FKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTE 631
            F+ W  G T YP+V+A M++L ATG++ +R R +V+S FV  L L WR+G  YF   L+D D+ S+   WQY++G   D R   R  N + +  ++DP+ E++ RW  +L+  P +
Sbjct:  325 FQKWCSGNTPYPIVNACMKQLNATGYMSNRGRQLVASCFVHELSLDWRYGAAYFEQQLIDYDVSSNWGNWQYLAGVGADPRG-HRQFNLEKQTERYDPDNEFIERWAGDLSGQPID 439          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRY2_VIBCH (Cryptochrome-like protein cry2 OS=Vibrio cholerae GN=cry2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.641e-16
Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = 2
Query:  290 AWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEALSEMWQ 772
            AW+ G TG PLVDA MR L  TG+L+ R+R ++ S     + + WR G+ Y     LD +       +Q  +G    G    RI NP  +  + D  G+++ +W+PELA++P   +  PW       Q   + L S Y  P++ ++A+     +A   +WQ
Sbjct:  310 AWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGV--TGTNTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEAS---AKQARDRLWQ 465          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_VIBCH (Cryptochrome DASH OS=Vibrio cholerae GN=cry1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.009e-15
Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 2
Query:  284 FKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRW 601
            F  W+ G T +P+V+A MR+L  TG++ +R R +V+S  V  L L WR+G  YF   L+D D+ S+   WQY++G   D R   R  N + + + +DP GE+V +W
Sbjct:  313 FLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQFNLEKQAHTYDPKGEFVAKW 417          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_VIBPA (Cryptochrome DASH OS=Vibrio parahaemolyticus GN=cry PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  284 FKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRW 601
            F+ W+ G T YP+V+A M +L  TG++ +R R +V+S  V  L L WR+G  YF   L+D D+ S+   WQY++G   D R   R  N + +   +DPN E++ RW
Sbjct:  313 FQQWKNGTTPYPIVNACMHQLNHTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLIDYDVGSNWGNWQYLAGVGADPRG-SRQFNLEKQTQMYDPNHEFIERW 417          
BLAST of EY711190 vs. ExPASy Swiss-Prot
Match: CRYD_GIBZE (Putative cryptochrome DASH OS=Gibberella zeae GN=FG08852 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 2
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYIS--GTIPDGRAFDRIDNPQFEGYKFDPNGEYVRRWLPELARLP-TEWIHHPWNAPESVLQAAGIELGSNYPFPIVRID 727
            W +G TG  LVDA  REL  TG+  +R R  V+S+  K L + WR G +Y+  +L+D D  S+   WQY +  G  P  R+F+++     + + +D +G + R W+ E+  +   E +      P+  L+  G+        P+ RID
Sbjct:  391 WIRGTTGMGLVDASQRELQLTGYTSNRARQNVASYLTKSLGIDWRLGAEYYEQSLIDYDTHSNWGNWQYQASCGNDPRSRSFNQVK----QAFDYDQDGRFTRTWVNEVKSIDRLEHVFQICTCPKQELEKHGLSDNIMVTNPLKRID 534          
The following BLAST results are available for this feature:
BLAST of EY711190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CRYD_ARATH3.920e-2335.92Cryptochrome DASH, chloroplastic/mitochondrial OS=... [more]
PHR_YEAST6.687e-2334.81Deoxyribodipyrimidine photo-lyase, mitochondrial O... [more]
CRY1_DROME1.490e-2229.92Cryptochrome-1 OS=Drosophila melanogaster GN=cry P... [more]
CRYD_NEUCR8.174e-2139.23Putative cryptochrome DASH, mitochondrial OS=Neuro... [more]
CRYD_OSTTA1.821e-2032.16Cryptochrome DASH, chloroplastic/mitochondrial OS=... [more]
CRYD_IDILO2.461e-1738.79Cryptochrome DASH OS=Idiomarina loihiensis GN=cry ... [more]
CRY2_VIBCH4.641e-1631.68Cryptochrome-like protein cry2 OS=Vibrio cholerae ... [more]
CRYD_VIBCH3.009e-1539.62Cryptochrome DASH OS=Vibrio cholerae GN=cry1 PE=1 ... [more]
CRYD_VIBPA6.702e-1539.62Cryptochrome DASH OS=Vibrio parahaemolyticus GN=cr... [more]
CRYD_GIBZE1.493e-1431.76Putative cryptochrome DASH OS=Gibberella zeae GN=F... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711190 ID=EY711190; Name=EY711190; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCCCACGCGTCTGGCGCTACAACCTCATTTCTCTCTCCAC
ATTTGCATTTTGGGGAGGTTAGTGTGAGGAAAGTCTTCCATCTTGTCCGC
ATCAAGCAGGTTTCATGGGCCAATGAAGGGAACAAGGCTGGTGATGAGAG
TGTGAACTTGTTTCTCAAGTCAATTGGTCTTCGGGAATATTCAAGGTACA
TGAGTTTTAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCACCTT
AAGTTCTTTTCTTGGGTTGTGGATGAGGGCTATTTTAAGGCATGGAGGCA
AGGTAGAACTGGTTATCCACTGGTGGATGCTGGCATGAGAGAGTTGTGGG
CCACTGGTTGGCTTCATGATCGGATACGAGTAGTAGTTTCTAGTTTCTTT
GTAAAAGTTCTACAGCTTCCATGGAGATGGGGGATGAAATATTTTTGGGA
TACCCTCTTGGATGCAGATTTAGAAAGTGATGCTCTTGGTTGGCAGTACA
TATCCGGTACTATCCCTGATGGCCGTGCTTTTGACCGAATTGACAATCCA
CAGTTTGAGGGTTACAAGTTTGACCCCAATGGAGAATATGTACGACGGTG
GCTCCCTGAACTTGCCAGACTGCCCACTGAATGGATACACCACCCATGGA
ATGCACCAGAGTCTGTGCTCCAAGCTGCTGGCATTGAGCTGGGTTCCAAT
TACCCTTTTCCCATAGTACGGATTGACGCAGCAAAATGCAGGCTGGACGA
AGCACTTTCAGAAATGTGGCAGCAAGAAGCAGCTTCAAGAGCTGCCATTG
GAAATGGAACTTGAGGAAAGTCTTGGAGACTCTTCTGACTCGGCCCAATT
GCCTTTCTCCCGACATACAGAGGAAGGAATCCCCTGAACTGCTAAGAACA
ACTTCCTACCCAGGTTCGGG
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