EY711189

Overview
NameEY711189
Unique NameEY711189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_SOLLC (Chloroplast envelope membrane protein OS=Solanum lycopersicum GN=cemA PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.604e-61
Identity = 121/217 (55.76%), Postives = 144/217 (66.36%), Query Frame = 3
Query:   66 MTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLFFY 716
            M KK A  PL YL+SIVF   LPWWI  S NK LESWVTNWWNT QS+  LN+IQ                 DEMIKE+ E  LE+  IG+ KETIQLI + +E+ + TI HFSTN I F ILSGYSIL  E+L ILNSW QEFLYNLSDT KA  IL V++  +G+HSP GWE +I  +YN+ G+  N+  I  ++LV   PV+ DT FKYWLF Y
Sbjct:    1 MAKKKAFTPLFYLASIVF---LPWWISFSVNKWLESWVTNWWNTGQSQIVLNNIQEKSLLEKFRELEELLFLDEMIKEYSETHLEEFGIGIHKETIQLITIQNENRMDTILHFSTNIIWFGILSGYSILGKEKLVILNSWAQEFLYNLSDTAKALCILLVSEFFLGYHSPPGWEFVIRSIYNEVGVVANEQTI--TILVCILPVIFDTCFKYWLFRY 212          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_PELHO (Chloroplast envelope membrane protein OS=Pelargonium hortorum GN=cemA-A PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.204e-60
Identity = 126/221 (57.01%), Postives = 146/221 (66.06%), Query Frame = 3
Query:   54 TDEKMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLFFY 716
            TD KM KK  + P  YL+SIVF   LPWWI L F KSLESWVTNW N SQSE FLNDIQ                 DEMIKE P+  L+K RIG+ KETIQL+ M+++D IHTI HFSTN I FVILS  SIL NEEL ILNSW++EFLYNLSDT+KAF +L +TD   GFH+   WELLIG V +        ND + S+LV  FP VL T + +W F Y
Sbjct:    2 TDAKMKKKRTT-PFLYLASIVF---LPWWISLFFKKSLESWVTNWLNISQSEPFLNDIQEKSLIEKFIELEELLLLDEMIKECPKLDLQKFRIGIHKETIQLMNMYNDDRIHTILHFSTNIISFVILSVCSILGNEELVILNSWIKEFLYNLSDTLKAFCLLALTDFLFGFHTISAWELLIGSVVH--------NDQMRSLLVCLFPSVLHTIYYFWTFNY 210          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_CYCTA (Chloroplast envelope membrane protein OS=Cycas taitungensis GN=cemA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 8.641e-57
Identity = 105/215 (48.84%), Postives = 137/215 (63.72%), Query Frame = 3
Query:   66 MTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            M K  A   LRYL+ +VF   LPW I +SF K LE WVTNWWNT QS  F + +Q                 + M+++  E   + LRI ++K+TIQL++M++ED I  I H   N ICF     Y IL  E+L +LNSW+QE  ++LSDT+KAFSIL VTDLCIGFHSP GWEL+I  +  ++G +H++  I  S LVSTFPV+ DT FKYW+F
Sbjct:    1 MAKYKALASLRYLACLVF---LPWGISISFQKGLEPWVTNWWNTGQSREFSDYLQEENALERFGEIEELFLLERMVEDSSETHSQDLRIEIRKKTIQLVEMYNEDLIQIISHLLANFICFATPGAYFILGKEKLVVLNSWIQELFHSLSDTMKAFSILLVTDLCIGFHSPHGWELMIDSISENYGFSHDEQRI--SGLVSTFPVISDTIFKYWIF 210          

HSP 2 Score: 33.113 bits (74), Expect = 8.641e-57
Identity = 17/26 (65.38%), Postives = 18/26 (69.23%), Query Frame = 2
Query:  689 IF*ILAFFLLNRVSPSLVVIYHFMTE 766
            IF    F  LNR+SPSLVVIYH M E
Sbjct:  204 IFKYWIFRHLNRISPSLVVIYHSMNE 229          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_CRYJA (Chloroplast envelope membrane protein OS=Cryptomeria japonica GN=cemA PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.492e-56
Identity = 102/216 (47.22%), Postives = 142/216 (65.74%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++ K      L+YL+ ++    LPW I +S   SLESWVTNWWNT QS+   + +Q                 + M+K++ E   + +R+ +QK+ IQL+K++++D IH I H   N I  V+LS   IL  ++L ILNSW+QE  Y+LSDT+KAFSIL VTDLCIGFHSP GWEL+I +++ ++G AHN+   I+S LVSTFPV+LDT FKYW+F
Sbjct:   32 EVAKYKTFASLQYLTCLIV---LPWAISISLQNSLESWVTNWWNTGQSKKIFDYLQEENAIRKFEKIEELFLLEIMVKDYSETPSQDIRVEMQKKMIQLVKIYNQDCIHIISHLLANLIGLVLLSVCLILGKKKLGILNSWIQEVFYSLSDTMKAFSILLVTDLCIGFHSPHGWELMINWIFENYGFAHNER--IISGLVSTFPVILDTIFKYWIF 242          

HSP 2 Score: 33.4982 bits (75), Expect = 2.492e-56
Identity = 17/26 (65.38%), Postives = 18/26 (69.23%), Query Frame = 2
Query:  689 IF*ILAFFLLNRVSPSLVVIYHFMTE 766
            IF    F  LNR+SPSLVVIYH M E
Sbjct:  236 IFKYWIFRRLNRISPSLVVIYHSMNE 261          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_GINBI (Chloroplast envelope membrane protein OS=Ginkgo biloba GN=cemA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 9.385e-56
Identity = 102/216 (47.22%), Postives = 139/216 (64.35%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            K+ K   S  L+YL+   F+VFLPW I +SF + L  WVTNWWNT QS+ F + +Q                 + M+++  E   + LRI + ++TIQL+KM+++D I  I H  TN ICF I S Y I+  ++L +LNSW+QE  Y+LSDT+KAFSI+ VTDLCIGFHS  GWEL+I  +  ++G  HN+   I+S LV TFPV+ DT FKYW+F
Sbjct:   32 KVAKYKVSASLQYLA---FLVFLPWGISISFQEGLGPWVTNWWNTGQSKIFFSYLQEENALERFGEIEELFLLERMVEDSSETHSQDLRIEIHRKTIQLVKMYNKDCIQIISHLLTNMICFAISSAYFIMSKKKLTVLNSWIQELFYSLSDTMKAFSIISVTDLCIGFHSTHGWELMIDSISENYGFVHNEQ--IISGLVPTFPVISDTIFKYWIF 242          

HSP 2 Score: 29.6462 bits (65), Expect = 9.385e-56
Identity = 15/26 (57.69%), Postives = 16/26 (61.54%), Query Frame = 2
Query:  689 IF*ILAFFLLNRVSPSLVVIYHFMTE 766
            IF    F   NR+SP LVVIYH M E
Sbjct:  236 IFKYWIFRHFNRISPPLVVIYHSMNE 261          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_PINKO (Chloroplast envelope membrane protein OS=Pinus koraiensis GN=cemA PE=3 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 4.608e-55
Identity = 103/216 (47.69%), Postives = 136/216 (62.96%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++ +  AS  LRYL+ +V    LPW IP+S  K LE WVTNWWNT +S    + +Q                 + M+++      + LRI + KETIQL++M++ED I  I H  TN I F  +S Y IL   +L I+NSW+QEF Y+LSDT+KAF IL  TDLCIGFHSP GWEL+I  +  ++G AHN+   I+S LVSTFPV+LDT  KYW+F
Sbjct:   32 EVAEYKASASLRYLACLVG---LPWVIPISLRKGLEPWVTNWWNTGKSHQIFDYLQEENALGRFEKIEELFLLERMVEDSSGTHSQDLRIEIHKETIQLVEMYNEDCIQIISHLLTNLIGFAFISAYLILGKNQLAIINSWIQEFFYSLSDTMKAFLILLATDLCIGFHSPHGWELMIDSISENYGFAHNER--IISGLVSTFPVILDTILKYWIF 242          

HSP 2 Score: 31.187 bits (69), Expect = 4.608e-55
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  707 FFLLNRVSPSLVVIYHFMTE 766
            F   NR+SPSLVVIYH M E
Sbjct:  242 FRRFNRISPSLVVIYHSMNE 261          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_PINTH (Chloroplast envelope membrane protein OS=Pinus thunbergii GN=cemA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 7.831e-55
Identity = 102/216 (47.22%), Postives = 137/216 (63.43%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++++  AS  LRYL+ +V    LPW IP+S  K LE WVTNWWNT +S+   + +Q                 + M+++      + +RI + KETIQL++M++ED I  I H  TN I F  +S Y IL   +L I+NSW+QEF Y+LSDT+KAF IL  TDLCIGFHSP GWEL+I  +   +G AHN+   I+S LVSTFPV+LDT  KYW+F
Sbjct:   32 EVSEYKASASLRYLACLVV---LPWVIPISLRKGLEPWVTNWWNTVKSQKIFDYLQEQNALGRFEKIEELFLLERMVEDSLGTHSQSIRIEIHKETIQLVEMYNEDCIQIISHLLTNLIGFAFISAYIILGKNKLAIINSWIQEFFYSLSDTMKAFLILLATDLCIGFHSPHGWELMIDSISESYGFAHNER--IISGLVSTFPVILDTILKYWIF 242          

HSP 2 Score: 31.187 bits (69), Expect = 7.831e-55
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:  707 FFLLNRVSPSLVVIYHFMTE 766
            F   NR+SPSLVVIYH M E
Sbjct:  242 FRRFNRISPSLVVIYHSMNE 261          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_WELMI (envelope membrane protein, chloroplastic OS=Welwitschia mirabilis GN=cemA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.630e-49
Identity = 97/220 (44.09%), Postives = 137/220 (62.27%), Query Frame = 3
Query:   51 FTDEKMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            F + ++ KK AS  LRYL+ ++    LPW I +   KS+E WVT WWNTS  +  L+ ++                 + MI+ + E   +     ++K+T  +IK++ +D IH I H  TN I F +LS Y ++  ++L I  SW++EF Y++SDT+KAFSIL  TDLCIGFHSP GWELLI ++  ++G  HND   I+S LVSTFPV+LDT FKYW+F
Sbjct:   28 FYEMEVAKKRASASLRYLTCLLV---LPWVISILLQKSIEPWVTFWWNTSSFD-ILDFLEEENTLVIFGQIEELLLFERMIENYSETYSKPSSKEIKKKT-NVIKLYKKDCIHIITHLFTNFIGFALLSTYLVMGQKKLAIFFSWIREFFYSMSDTMKAFSILLATDLCIGFHSPHGWELLIDWISENYGFVHNDR--IISSLVSTFPVILDTIFKYWIF 240          

HSP 2 Score: 31.9574 bits (71), Expect = 2.630e-49
Identity = 16/26 (61.54%), Postives = 17/26 (65.38%), Query Frame = 2
Query:  689 IF*ILAFFLLNRVSPSLVVIYHFMTE 766
            IF    F   NR+SPSLVVIYH M E
Sbjct:  234 IFKYWIFRRFNRISPSLVVIYHSMNE 259          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_ANTFO (Chloroplast envelope membrane protein OS=Anthoceros formosae GN=cemA PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 4.006e-47
Identity = 94/207 (45.41%), Postives = 126/207 (60.87%), Query Frame = 3
Query:  102 LSSIVFV---VFLPWWIPLSFNK-SLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            L+SI ++   +FLPW I  S  +  LE W+  WW+T QS+  LN  Q                 D+++  F + + + L I +  ETIQLI+M++E+ I TI H  T  ICF  L    IL  + L +LNSW+QE  Y+LSDT+KAF+IL +TDLCIGFHSP GWE++IG      G AHN +  I+S  VSTFPV+LDT  KYW+F
Sbjct:  285 LASIQYIGCLIFLPWIISRSLKEWFLEPWIKFWWDTYQSQISLNSFQEERASEGLQEVEEPLWLDKLVSNFLKNQSQDLNIEIYGETIQLIRMYNENSIQTILHLLTGMICFTTLGALFILGKKRLSVLNSWIQESFYSLSDTMKAFAILLLTDLCIGFHSPHGWEVVIGSSLEHLGFAHNKH--IISCFVSTFPVILDTVSKYWIF 489          

HSP 2 Score: 28.1054 bits (61), Expect = 4.006e-47
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  716 LNRVSPSLVVIYHFMTE 766
            LNR+SPS+V  YH M E
Sbjct:  492 LNRISPSIVATYHTMNE 508          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_PHYPA (Chloroplast envelope membrane protein OS=Physcomitrella patens GN=cemA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.176e-45
Identity = 94/220 (42.73%), Postives = 135/220 (61.36%), Query Frame = 3
Query:   57 DEKMTKKNASIPLRYLSSIVFVVFLPW-WIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDE-MIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            D ++ +  A   L+Y+   +F++F+PW +  L     LE W+ NWWNT Q + FLN  Q                 D+ M+    E + + L I + ++TIQL+K+++E+ ++T+ H  T+ +  + LS   IL  + L ILNSW+QE  Y+LSDT+KAFSIL +TDLCIGFHSP GWE++IG      G AHN +  I+S  VSTFPV+LDT FKYW+F
Sbjct:  206 DFQIARYQALASLQYM---LFLLFIPWGFSSLLKIWFLEPWLKNWWNTYQYQIFLNSFQEELALKRLQQIEELVWLDKIMVNSLKEPQSQDLNIEIHQKTIQLVKIYNENSLNTLLHLLTDIVYVITLSAVFILGKQRLAILNSWIQELFYSLSDTMKAFSILLLTDLCIGFHSPHGWEIVIGSFLEHLGFAHNKH--IISCFVSTFPVILDTVFKYWIF 420          
The following BLAST results are available for this feature:
BLAST of EY711189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
CEMA_SOLLC3.604e-6155.76Chloroplast envelope membrane protein OS=Solanum l... [more]
CEMA_PELHO5.204e-6057.01Chloroplast envelope membrane protein OS=Pelargoni... [more]
CEMA_CYCTA8.641e-5748.84Chloroplast envelope membrane protein OS=Cycas tai... [more]
CEMA_CRYJA2.492e-5647.22Chloroplast envelope membrane protein OS=Cryptomer... [more]
CEMA_GINBI9.385e-5647.22Chloroplast envelope membrane protein OS=Ginkgo bi... [more]
CEMA_PINKO4.608e-5547.69Chloroplast envelope membrane protein OS=Pinus kor... [more]
CEMA_PINTH7.831e-5547.22Chloroplast envelope membrane protein OS=Pinus thu... [more]
CEMA_WELMI2.630e-4944.09envelope membrane protein, chloroplastic OS=Welwit... [more]
CEMA_ANTFO4.006e-4745.41Chloroplast envelope membrane protein OS=Anthocero... [more]
CEMA_PHYPA6.176e-4542.73Chloroplast envelope membrane protein OS=Physcomit... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711189 ID=EY711189; Name=EY711189; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGGACGCATAGAATCAACAAATGAGGTGGGTTCATTAACAA
TTCACAGATGAAAAAATGACAAAAAAGAACGCATCCATTCCCCTTAGATA
TCTTTCATCTATAGTATTTGTAGTATTTTTGCCCTGGTGGATCCCTCTCT
CATTTAATAAAAGTCTGGAATCCTGGGTTACTAATTGGTGGAATACTAGT
CAATCCGAAACCTTTTTGAATGATATTCAAGAAAAGGCTATTCTAGAAAA
ATTCATAGAATTAGAGGAATTATTTCTCTTGGACGAAATGATAAAGGAAT
TTCCGGAAAGACGTCTAGAAAAGCTTCGTATAGGGCTCCAGAAAGAAACA
ATCCAATTAATCAAGATGCACGATGAGGATCATATCCATACGATTTTTCA
CTTTTCGACAAATACAATCTGCTTCGTTATTCTAAGTGGTTATTCTATTT
TGTGTAATGAAGAACTTTTTATTCTTAACTCTTGGGTTCAAGAATTCCTA
TATAATTTAAGCGACACAATAAAAGCCTTTTCGATTCTTTTCGTAACTGA
TTTATGTATCGGATTCCATTCACCCCGCGGTTGGGAACTACTGATTGGCT
ATGTCTACAACGACTTTGGGCTTGCTCATAATGATAATGATATTATTCTA
TCTGTTCTTGTTTCCACTTTTCCAGTCGTTCTAGATACATTTTTTAAATA
TTGGCTTTTTTTCTATTAAATCGTGTATCTCCGTCACTTGTAGTGATTTA
TCATTTCATGACTGAGTGAAAAGCGATTCCATGATCCCATTAGAATATTT
TCTATTTTGACATAAGCAAAGCATTCCAAGCTGTACTTACCTTACTTTTT
CTACAAATCAGAGATCCCTCCCAGATTCAGGGAATCTATACTATAACCCA
GTAAATGAATTCG
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