EY711189

Overview
NameEY711189
Unique NameEY711189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_ANGEV (Chloroplast envelope membrane protein OS=Angiopteris evecta GN=cemA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.176e-45
Identity = 92/216 (42.59%), Postives = 132/216 (61.11%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++ K  A   ++Y+  ++F++ +     LS    L+SW+TNWWNTSQS  FLN  Q                 D ++ ++ + + + L I + +ETIQL+ +++ED I  I H  T+ I  V L    I+  + L +LNSW+QE  Y+LSDT+KAFSIL +TDLCIGFHSP GWE++IG      G +HN +  I+S  VSTFPV+LDT FKYW+F
Sbjct:  218 RLAKYQALASIQYIGCLLFILSIISM--LSKTMFLKSWITNWWNTSQSHIFLNLFQEERALKELQEMEELLWLDRVMADYVKDQSQDLDIEIYEETIQLVTIYNEDSIQIILHLLTDIISIVTLIVLFIIGRKRLAVLNSWIQELFYSLSDTMKAFSILLLTDLCIGFHSPHGWEIVIGSFLEHLGFSHNKH--IISCFVSTFPVILDTVFKYWIF 429          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_CHAGL (Chloroplast envelope membrane protein OS=Chaetosphaeridium globosum GN=cemA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.112e-44
Identity = 94/217 (43.32%), Postives = 127/217 (58.53%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIP-LSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++ K +  + L+Y++S++F   LPW I  L  N  L+SW+ NWWNTSQS+ F+N  Q                 D  + E  E + + L   + + TIQL + +++D I+ I H  T+ I    L    IL  + L ILNSWVQE  Y+L+DT+KAF IL  TDLCIGFHSP GWE+ I  +    G AH  N  I+S LVSTFPV+LDT  KYW+F
Sbjct:  242 RLAKYHTWVSLQYVASLIF---LPWLITKLCQNLFLQSWIENWWNTSQSQIFINLSQQTKALQRLQQLEELLWLDMAMSERIEGQPQDLGALIHQRTIQLAEYYNQDSINIILHLFTDFIAIFTLIVLLILGKKRLAILNSWVQEVFYSLTDTMKAFLILLFTDLCIGFHSPHGWEIAIDGLLEHLGFAH--NKYIVSCLVSTFPVILDTVLKYWIF 453          

HSP 2 Score: 29.6462 bits (65), Expect = 5.112e-44
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  716 LNRVSPSLVVIYHFMTE 766
            LNR+SPS+VV YH M E
Sbjct:  456 LNRISPSIVVTYHTMNE 472          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_STAPU (Chloroplast envelope membrane protein OS=Staurastrum punctulatum GN=cemA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 5.526e-43
Identity = 87/218 (39.91%), Postives = 129/218 (59.17%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSL--ESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++ K  A   ++YL+   F++F PW + L+  K L  E  + NWWNT+Q + FL+  Q                 D ++ +   ++ + L   + + TI L++ ++++ I TI HF TN +   ++    I   + L ILNSWVQE  Y+LSDT+KAF IL  TDLCIGFHSP GWE+LIG++    G +HN +  ++S  VSTFPV+LDT FKYW+F
Sbjct:  352 RLAKYQAITSIKYLA---FLIFCPWLV-LTVCKILFLEPLIENWWNTAQFQIFLSFSQEEKALKRLQQVEELLWLDIIMADSSAKQPQDLSAQIHQRTIDLVETYNQESIQTILHFFTNFLFIFVVISLLIWGKKRLAILNSWVQEVFYSLSDTMKAFFILLFTDLCIGFHSPHGWEILIGFILEHLGFSHNKH--VISCFVSTFPVILDTVFKYWIF 563          

HSP 2 Score: 29.6462 bits (65), Expect = 5.526e-43
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 2
Query:  689 IF*ILAFFLLNRVSPSLVVIYHFMTE 766
            +F    F  LNR+SPS+VV YH M E
Sbjct:  557 VFKYWIFRHLNRISPSIVVSYHTMNE 582          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_MARPO (Chloroplast envelope membrane protein OS=Marchantia polymorpha GN=cemA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.714e-42
Identity = 87/218 (39.91%), Postives = 124/218 (56.88%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKS-LESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPER-RLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++ K  A   L+Y+  + F+   P  +   F K  LE W+ NWWN  QS+ FL   Q                 D+++     + +L+ L   + ++TI+L+++++ D I  + H  T+ I F+ LS   IL  E L ILNSW QE  Y+LSDT+KAF IL +TDLCIGFHSP GWE++I      FG  HN +  ++S  VSTFPV+LDT FKY +F
Sbjct:  203 RLAKYQALASLQYIGCLFFI---PLGVSFFFQKCFLEPWIQNWWNIYQSQIFLTSFQEEKALKKLQEIEELFWLDKVMTYSSNKIQLQDLTKEIHQQTIELVQIYNNDSIKIVLHLLTDLIWFITLSCLFILGKERLVILNSWAQELFYSLSDTMKAFFILLLTDLCIGFHSPHGWEIVISSCLEHFGFVHNKH--VISCFVSTFPVILDTVFKYLIF 415          

HSP 2 Score: 30.8018 bits (68), Expect = 2.714e-42
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 2
Query:  689 IF*ILAFFLLNRVSPSLVVIYHFMTE 766
            +F  L F  LNR+SPS+V  YH M E
Sbjct:  409 VFKYLIFRHLNRISPSIVATYHTMNE 434          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_PSINU (Chloroplast envelope membrane protein OS=Psilotum nudum GN=cemA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.440e-40
Identity = 89/217 (41.01%), Postives = 129/217 (59.45%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIP-LSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            K+ K  A   LRY+  ++F   LP++I  +S    LE  + +WWNTSQ + F+N +Q                 D +I E  E   + L I ++++T+QL+ +++ED I  I +  T+ I F ILS   I+  + L + NSW+QE  ++LSDT+KAF IL +TDL IGFHSP GWE++IG +    G A++   I  S  VSTFPV+LDT FKYW+F
Sbjct:  221 KLAKYQALASLRYMGCLLF---LPFFISSISKKWVLEPRIKDWWNTSQFQIFINHLQEKKALKRLQDVEELLWLDRIILE--EDHSKDLSIKIREKTVQLVAIYNEDSIQIILNLLTDIISFTILSVLVIIGKKRLAVSNSWIQELFHSLSDTMKAFFILLLTDLFIGFHSPHGWEIIIGSILEHIGFAYDKYTI--SYFVSTFPVILDTVFKYWIF 430          

HSP 2 Score: 27.7202 bits (60), Expect = 2.440e-40
Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 2
Query:  689 IF*ILAFFLLNRVSPSLVVIYHFMTE 766
            +F    F  LNR+SPS+V  YH M E
Sbjct:  424 VFKYWIFRHLNRLSPSIVATYHTMNE 449          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_HUPLU (Chloroplast envelope membrane protein OS=Huperzia lucidula GN=cemA PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.877e-39
Identity = 88/220 (40.00%), Postives = 123/220 (55.91%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPWWIPLSFNK-SLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMI---KEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++ K  A   L+YL  ++ +   PW I     +  L+ W+ NWWN +Q + FLN  Q                 DE++       E + + L   +  +TIQL+ M++ED I TI H  T+ I F I S   I   + L ++NSW+QE  ++LSDT+KAF IL +TD CIGFHSP GWE+LI  +    G AHN +  I+S  VSTFPV+ DT FKYW+F
Sbjct:  288 RLAKYQALASLQYLGCLILI---PWGISFPSERWLLKPWIKNWWNINQFQIFLNYFQEERASKRLQEVEELLWLDEVMLADSSSSEVQSQDLNRQIHDKTIQLVAMYNEDSIQTILHLLTDIIYFAIPSASFISGKKRLAVMNSWIQESFHSLSDTMKAFFILLLTDSCIGFHSPHGWEILISSLSKHLGFAHNKH--IISCFVSTFPVISDTVFKYWIF 502          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_ADICA (Chloroplast envelope membrane protein OS=Adiantum capillus-veneris GN=cemA PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 3.716e-38
Identity = 81/215 (37.67%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   66 MTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            + K  AS+ L+Y+  ++F+   P  I +  N  LE  +  WWN  Q + F N  Q                 D++I    + +L+      + ET +L  M+DE +I  +   +TN I    L    I   + L +LNSW+QE  Y+L+DT+KAFSIL +TDLC+GFHSP GWE+L+  ++  FGL    N  +    VSTFPV+LDT FKYW+F
Sbjct:  236 LAKNQASVSLQYVGFLLFL--FPIQIAIE-NWFLEPRIRGWWNIRQIQLFSNVFQEENALKQLREAEALFWLDDVIGNLADTQLQNFDTDARNETTRLAMMYDELNIQLLLRLATNAISIATLFPLLIFGRKRLAVLNSWIQELFYSLNDTMKAFSILLLTDLCVGFHSPHGWEILVQSLFEYFGL--TPNKYVTPCFVSTFPVILDTLFKYWIF 445          

HSP 2 Score: 27.335 bits (59), Expect = 3.716e-38
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  716 LNRVSPSLVVIYHFMTE 766
            LNR SPS+V  YH M+E
Sbjct:  448 LNRTSPSIVATYHTMSE 464          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_AEGTA (Chloroplast envelope membrane protein (Fragment) OS=Aegilops tauschii GN=cemA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.629e-37
Identity = 82/154 (53.25%), Postives = 96/154 (62.34%), Query Frame = 3
Query:   66 MTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKA 527
            M KK A   L YL   VF+V LPW +  SFNK LE W+ NWWNT QSET L DIQ                 DEMIK   +  ++K   G+ KE IQ +K+++EDH+HTI HFSTN IC  ILSG   L  EEL ILNSWVQEF YNL+D+IKA
Sbjct:    1 MKKKKALPSLLYL---VFIVLLPWGVSSSFNKCLELWIKNWWNTRQSETLLTDIQEKRILERFIELEELSLLDEMIKGKLKTHVQKPPTGIHKEIIQWVKINNEDHLHTILHFSTNIICLAILSGSFFLGKEELVILNSWVQEFFYNLNDSIKA 151          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_AEGCR (Chloroplast envelope membrane protein (Fragment) OS=Aegilops crassa GN=cemA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.629e-37
Identity = 82/154 (53.25%), Postives = 96/154 (62.34%), Query Frame = 3
Query:   66 MTKKNASIPLRYLSSIVFVVFLPWWIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKA 527
            M KK A   L YL   VF+V LPW +  SFNK LE W+ NWWNT QSET L DIQ                 DEMIK   +  ++K   G+ KE IQ +K+++EDH+HTI HFSTN IC  ILSG   L  EEL ILNSWVQEF YNL+D+IKA
Sbjct:    1 MKKKKALPSLLYL---VFIVLLPWGVSSSFNKCLELWIKNWWNTRQSETLLTDIQEKRILERFIELEELSLLDEMIKGKLKTHVQKPPTGIHKEIIQWVKINNEDHLHTILHFSTNIICLAILSGSFFLGKEELVILNSWVQEFFYNLNDSIKA 151          
BLAST of EY711189 vs. ExPASy Swiss-Prot
Match: CEMA_ZYGCR (Chloroplast envelope membrane protein OS=Zygnema circumcarinatum GN=cemA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.339e-36
Identity = 76/217 (35.02%), Postives = 121/217 (55.76%), Query Frame = 3
Query:   63 KMTKKNASIPLRYLSSIVFVVFLPW-WIPLSFNKSLESWVTNWWNTSQSETFLNDIQXXXXXXXXXXXXXXXXXDEMIKEFPERRLEKLRIGLQKETIQLIKMHDEDHIHTIFHFSTNTICFVILSGYSILCNEELFILNSWVQEFLYNLSDTIKAFSILFVTDLCIGFHSPRGWELLIGYVYNDFGLAHNDNDIILSVLVSTFPVVLDTFFKYWLF 710
            ++ K  A+  ++Y++ ++F   LPW +  +     L+  V+++W+T Q++ F N  Q                 D +I   P + L+ +   +  +T++L+ +++ + I TI +  T+ I    L+       + L I NSW+QE  Y+LSDT+KAF IL +TDLCIGFHSP GWE++I       G AH  N  ++S  VSTFPV+LDT  KYW+F
Sbjct:  223 RLAKYQATASVQYMACLIF---LPWVFSTICKIIFLQPLVSHYWDTMQTQVFFNASQEQRALRRLQQIEELLWLDIVIASVPNKHLQDIAGEIHNKTLELVDIYNRESICTILNLLTDWISITCLACLLTWGKKRLAIFNSWIQELFYSLSDTMKAFFILLLTDLCIGFHSPHGWEIIITLFLEHIGFAH--NKYVVSCFVSTFPVILDTVLKYWIF 434          

HSP 2 Score: 29.6462 bits (65), Expect = 4.339e-36
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  716 LNRVSPSLVVIYHFMTE 766
            LNR+SPS+VV YH M E
Sbjct:  437 LNRISPSIVVTYHTMNE 453          
The following BLAST results are available for this feature:
BLAST of EY711189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
CEMA_ANGEV6.176e-4542.59Chloroplast envelope membrane protein OS=Angiopter... [more]
CEMA_CHAGL5.112e-4443.32Chloroplast envelope membrane protein OS=Chaetosph... [more]
CEMA_STAPU5.526e-4339.91Chloroplast envelope membrane protein OS=Staurastr... [more]
CEMA_MARPO2.714e-4239.91Chloroplast envelope membrane protein OS=Marchanti... [more]
CEMA_PSINU2.440e-4041.01Chloroplast envelope membrane protein OS=Psilotum ... [more]
CEMA_HUPLU3.877e-3940.00Chloroplast envelope membrane protein OS=Huperzia ... [more]
CEMA_ADICA3.716e-3837.67Chloroplast envelope membrane protein OS=Adiantum ... [more]
CEMA_AEGTA1.629e-3753.25Chloroplast envelope membrane protein (Fragment) O... [more]
CEMA_AEGCR1.629e-3753.25Chloroplast envelope membrane protein (Fragment) O... [more]
CEMA_ZYGCR4.339e-3635.02Chloroplast envelope membrane protein OS=Zygnema c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711189 ID=EY711189; Name=EY711189; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGGACGCATAGAATCAACAAATGAGGTGGGTTCATTAACAA
TTCACAGATGAAAAAATGACAAAAAAGAACGCATCCATTCCCCTTAGATA
TCTTTCATCTATAGTATTTGTAGTATTTTTGCCCTGGTGGATCCCTCTCT
CATTTAATAAAAGTCTGGAATCCTGGGTTACTAATTGGTGGAATACTAGT
CAATCCGAAACCTTTTTGAATGATATTCAAGAAAAGGCTATTCTAGAAAA
ATTCATAGAATTAGAGGAATTATTTCTCTTGGACGAAATGATAAAGGAAT
TTCCGGAAAGACGTCTAGAAAAGCTTCGTATAGGGCTCCAGAAAGAAACA
ATCCAATTAATCAAGATGCACGATGAGGATCATATCCATACGATTTTTCA
CTTTTCGACAAATACAATCTGCTTCGTTATTCTAAGTGGTTATTCTATTT
TGTGTAATGAAGAACTTTTTATTCTTAACTCTTGGGTTCAAGAATTCCTA
TATAATTTAAGCGACACAATAAAAGCCTTTTCGATTCTTTTCGTAACTGA
TTTATGTATCGGATTCCATTCACCCCGCGGTTGGGAACTACTGATTGGCT
ATGTCTACAACGACTTTGGGCTTGCTCATAATGATAATGATATTATTCTA
TCTGTTCTTGTTTCCACTTTTCCAGTCGTTCTAGATACATTTTTTAAATA
TTGGCTTTTTTTCTATTAAATCGTGTATCTCCGTCACTTGTAGTGATTTA
TCATTTCATGACTGAGTGAAAAGCGATTCCATGATCCCATTAGAATATTT
TCTATTTTGACATAAGCAAAGCATTCCAAGCTGTACTTACCTTACTTTTT
CTACAAATCAGAGATCCCTCCCAGATTCAGGGAATCTATACTATAACCCA
GTAAATGAATTCG
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