EY711188

Overview
NameEY711188
Unique NameEY711188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.123e-24
Identity = 74/246 (30.08%), Postives = 121/246 (49.19%), Query Frame = 3
Query:  141 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +S GGG   G  LF  +V+  PA   L E+ I  ++ ++ V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    A   +++  +G++  +PG ++     AE   V  T  V PG+ V GM      G PRMG
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHDAEVVAVASRKIPELGIV--IPGERSAYSEMAEKLTVEQTGVVAPGLYVAGMSVTEVRGLPRMG 241          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.123e-24
Identity = 84/287 (29.27%), Postives = 140/287 (48.78%), Query Frame = 3
Query:  150 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD-EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRL--KSIGMIE-----------EVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMGQHLEHDDI-GAKAAHFALNHL 932
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A ELS+   +Q  ++E++   GGG WLGG L + + VR PA   L++L +D+   QD+  +         + + K       K+ N     D++++   RVGG+V NW  V       +C+DP  +EA +V+ + GHD          G   A G++     + GM +           + PG  ++ +  +EDA+V  T     G+IVTGM +A   G PRMG       + G +AA  AL+ L
Sbjct:    6 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELSER-GVQTMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQNVLEDLDVDFKRSQDSEGLYVANGPEACSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATGHDAVAVSKLQERGVLNAPGIEHADEHNTGMDQTGDDSYGAPGHDSPGHDSMWVGQSEDAVVEHTGLAHEGLIVTGMATATTYGLPRMGPTFGAMLLSGKRAAQAALDEL 291          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.176e-24
Identity = 78/266 (29.32%), Postives = 131/266 (49.25%), Query Frame = 3
Query:  153 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+++ + +  A    S +++        ++ N     D++V+    V G V NW  V       +C+DP  +EA VVV + GHD          G   A G++ ++  + GM +           + PG  ++ +  +ED +V  T  V  G++  G+ +A   G  RMG
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMIT-AACDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMG 269          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.176e-24
Identity = 78/266 (29.32%), Postives = 131/266 (49.25%), Query Frame = 3
Query:  153 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+++ + +  A    S +++        ++ N     D++V+    V G V NW  V       +C+DP  +EA VVV + GHD          G   A G++ ++  + GM +           + PG  ++ +  +ED +V  T  V  G++  G+ +A   G  RMG
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMIT-AACDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMG 269          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.797e-23
Identity = 80/263 (30.42%), Postives = 133/263 (50.57%), Query Frame = 3
Query:  162 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE-EVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMGQHLEHDDI-GAKAAHFALNHL 932
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E ++   + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++  K+V+   GH+     T ++++ +  + E  + G K +     E   V  TQ + PG+IV GM +     APRMG       + G KAA  AL+ L
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLLGEKPMWSEVGERLAVNATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.347e-23
Identity = 82/263 (31.18%), Postives = 131/263 (49.81%), Query Frame = 3
Query:  162 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE-EVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMGQHLEHDDI-GAKAAHFALNHL 932
            + E I++R +   Y    + Y D D    G G A L  A  L++    ++AI EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E +    + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++  K+V+   GHD     T ++++ +  + E  + G K +     E   V  TQ + PG+IV GM +     APRMG       + G KAA  AL+ L
Sbjct:    3 LDEVIITRAIFEEYSKTFLEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYEPGYFVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHDAVVCNTILRKIPNAKIGEFGILGEKPMWSEVGERLAVDATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.228e-23
Identity = 72/243 (29.63%), Postives = 116/243 (47.74%), Query Frame = 3
Query:  150 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ I   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T  V  G+  TGM      G PRMG
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGMAVTEVKGLPRMG 239          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.165e-22
Identity = 75/239 (31.38%), Postives = 114/239 (47.70%), Query Frame = 3
Query:  162 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            + E  +SR +       +I + + D    G G +GL+CA  L +   ++ A+IE+ +S GGG W GG +F  +VV++ A   LD  GI Y   ++ Y V K         ++       V+ FN    ED++++G GR+GG+V NW  V M       +DP  M     V + GHD    A   + ++  G    V G   +    AE  I+  T+ V PG+ VTGM +    G  RMG
Sbjct:    3 LNEVTISRAILEEQHRALIDHLEMDAAVIGGGPSGLACAALLGEK-GVKCALIEKKLSIGGGMWGGGMMFPRIVVQEDARRLLDRFGIAYKAFEEGYYVAKSVEAVAK--LTAAACDAGVEFFNLTTVEDVMIRGDGRIGGLVVNWTPVDM---AGLHVDPLTMACTCTVDATGHD----AMIARMVEKKGGALTVKGESFMWAERAESQILAHTKEVFPGLFVTGMAANAVAGECRMG 231          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.521e-22
Identity = 70/243 (28.81%), Postives = 116/243 (47.74%), Query Frame = 3
Query:  150 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            K   ++E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG   G  LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T  V  G+   GM      G PRMG
Sbjct:    4 KIKQVEEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMG 239          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.521e-22
Identity = 81/262 (30.92%), Postives = 130/262 (49.62%), Query Frame = 3
Query:  162 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKS--IGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMGQHLEHDDI-GAKAAHFALNHL 932
            + E I++R +   Y    + Y + D    G G A L  A  L++    ++AI EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E Q  Y V          I     A    ++FN V+ ED++++   RV G+V NW  V++    +  +DP ++  K+V+   GH+     T ++++ +  IG + ++ G K +     E  +V  T+ + PG+IV GM +     +PRMG       + G KAA  AL  L
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTEVDVALIGGGPANLVAARYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRILDDFGIRYKEYQPGYYVANSVESVGKLISGATSA--GAEVFNLVSFEDVMIRENDRVTGIVVNWGPVTVQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGNLGKL-GEKPMWSEVGEQLVVDATKEIYPGLIVAGMAANAATCSPRMGPVFGGMLLSGEKAAKLALEKL 257          
The following BLAST results are available for this feature:
BLAST of EY711188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_SULAC2.123e-2430.08Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_NATPD2.123e-2429.27Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_HALSA6.176e-2429.32Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS36.176e-2429.32Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_METAC1.797e-2330.42Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METMA2.347e-2331.18Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_SULSO5.228e-2329.63Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METMJ1.165e-2231.38Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_SULIM1.521e-2228.81Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METBF1.521e-2230.92Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711188 ID=EY711188; Name=EY711188; organism=Citrus sinensis; type=EST; length=933bp
ACTGGTACCCTGCGGTCCGTTCCGGATTCCCATGCCGACCACGCGTCCGT
GTCACCTTCTCTTCTACGTCTTCACCCATCAAATCTTCTCGTCCCAACAA
CTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCA
AGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATGACACGCAGG
TACATGACGGACATGATCACTTATGCTGACACTGATGTGGTAGTGGTTGG
TGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCA
ACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCG
TGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCCA
CATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAACTATG
TTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTC
CTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGACTT
GATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGCGTTGG
TGTCAATGAATCACGATACACAGTCTTGCATGGATCCCAATGTAATGGAA
GCGAAGGTGGTTGTGAGCTCTTGTGGCCATGATGGGCCTTTTGGGGCCAC
TGGAGTAAAGAGGTTGAAGAGTATCGGAATGATTGAGGAAGTGCCTGGAA
TGAAGGCACTGGACATGAACTCTGCAGAAGATGCTATTGTGAGGCTGACC
CAGGGAGTTGTGCCTGGTATGATAGTTACCGGCATGGAAAGTGCCCGAGA
TGATGGTGCTCCTCGAATGGGGCAACATTTGGAGCATGATGATATCGGGG
CAAAAGCTGCGCATTTTGCGTTGAATCACCTGG
back to top