EY711188

Overview
NameEY711188
Unique NameEY711188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_PYRIL (Putative thiazole biosynthetic enzyme OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_1998 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.599e-17
Identity = 68/235 (28.94%), Postives = 112/235 (47.66%), Query Frame = 3
Query:  177 VSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQ-DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            ++R + +  + D+  Y+D D    GAG AGL+ A  L++  + ++ + E+  S GGG   GG +   +VV++ A   L +  I Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+    S +DP   +AK V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+ V GM      G PRMG
Sbjct:    5 IARAIIKHGLEDLYEYSDVDVAIVGAGPAGLTAARYLAERGH-KVVVYERRFSFGGGIGPGGNMIPKIVVQEEAVPVLRDFKIRYKPVGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVVGLLWVWTPIQMSG---SHVDPLYTQAKAVLDATGHDAEVISIAARKVPELGI--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYVAGMAVCTVHGLPRMG 231          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_PYRAE (Putative thiazole biosynthetic enzyme OS=Pyrobaculum aerophilum GN=PAE0175 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.740e-16
Identity = 64/235 (27.23%), Postives = 110/235 (46.81%), Query Frame = 3
Query:  177 VSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            + R +    + D+  Y+D D    GAG AGL+ A  L++   +++ + E+  S GGG   GG +   +VV++ A   L +  + Y   +D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+      +DP   +AK V+ + GHD    +   +++  +G+  +V G K+     +E  +V  T  V PG+ V G+      G PRMG
Sbjct:    5 IGRAIISHALKDLDEYSDVDVAIVGAGPAGLTAARYLAEK-GLKVVVYERRFSFGGGIGPGGNMLPKIVVQEEAVPILRDFKVRYKPAEDGLYTVDPAELIAKLAAGAVDA--GAKIILGVHVDDVIFRGDPPRVTGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGI--QVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMG 231          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_PYRCJ (Putative thiazole biosynthetic enzyme OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.085e-16
Identity = 62/235 (26.38%), Postives = 109/235 (46.38%), Query Frame = 3
Query:  177 VSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQ-DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            + R + +  + D+  Y+D D    GAG AGL+ A  L++    ++ + E+  S GGG   GG +   +VV++ A   L +  + +    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M   +   +DP   +AK V+ + GHD    +   +++  +G+  ++ G K+     +E  +V  T  V PG+ V G+      G PRMG
Sbjct:    5 IGRAIIKHGLEDLYEYSDVDVAIVGAGPAGLTAARYLAER-GFKVLVFERRFSFGGGIGPGGNMIPKIVVQEEALPILKDFKVRFKPAGDGLYTVDPAELIAKLAAGAIDA--GAKILLGVHVDDVIFRGDPPRVAGLLWIWTPIQM---SGMHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGL--QLQGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMG 231          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_THENV (Putative thiazole biosynthetic enzyme OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1052 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 64/235 (27.23%), Postives = 111/235 (47.23%), Query Frame = 3
Query:  177 VSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQ-DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            ++R + +  + D+  Y++ D    GAG AGL+ A  L++  + ++ + E+  S GGG   GG +   +VV++ A   L +  + Y    D    +  A L        + A    K+   V  +D+I +G   RV G++  W  + M+    S +DP   +A+ V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+   GM      G PRMG
Sbjct:    5 IARAIIKHGLEDLYEYSEVDVAVVGAGPAGLTAARYLAERGH-RVVVYERRFSFGGGIGPGGNMIPKIVVQEEAVPVLKDFRVRYRPVGDGLYTVDPAELIAKLAAGAIDA--GAKIILGVHVDDVIFRGDPPRVAGLLWVWTPIQMSG---SHVDPLYTQARAVLDATGHDAEVISIASRKVPELGV--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYAAGMAVCAVHGLPRMG 231          
BLAST of EY711188 vs. ExPASy Swiss-Prot
Match: THI4_DESMR (Putative thiazole biosynthetic enzyme OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=DMR_31420 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15
Identity = 65/244 (26.64%), Postives = 122/244 (50.00%), Query Frame = 3
Query:  162 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG----GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKR--LKSIGMIEEVPGMKALDMNSAEDAIVRLTQGVVPGMIVTGMESARDDGAPRMG 872
            + E I+++ +   Y     +  D D    G G +G++ A  L+ +    +A+ E+ +S GGG W GG  F+ +VV++ +   L ++G+     +DNY      A  T+   +  LA    K+FN ++ ED++++      RV G+V N + V +       +DP V+ +K +V + GH      T V++  ++       + G +++  ++AE   V+ T+ + PG+ V GM +    G+ RMG
Sbjct:    3 LDERIITQAILETYFEKFKSSLDLDVAIVGGGPSGMTAARLLAAD-GFNVALFERKLSLGGGMWGGGMTFNMIVVQEESVHLLTDVGVPVKRYKDNYFTADAVAATTTLASAACLA--GAKIFNCMSVEDVMLREENGVKRVTGIVINSSPVEI---AGLHVDPVVLGSKYLVEATGHAVEVLQTLVRKNDVRLNTPSGGIEGEQSMWADTAEINTVKNTREIFPGLYVAGMAANASYGSYRMG 240          
The following BLAST results are available for this feature:
BLAST of EY711188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_PYRIL5.599e-1728.94Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_PYRAE4.740e-1627.23Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_PYRCJ8.085e-1626.38Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_THENV1.056e-1527.23Putative thiazole biosynthetic enzyme OS=Thermopro... [more]
THI4_DESMR3.072e-1526.64Putative thiazole biosynthetic enzyme OS=Desulfovi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711188 ID=EY711188; Name=EY711188; organism=Citrus sinensis; type=EST; length=933bp
ACTGGTACCCTGCGGTCCGTTCCGGATTCCCATGCCGACCACGCGTCCGT
GTCACCTTCTCTTCTACGTCTTCACCCATCAAATCTTCTCGTCCCAACAA
CTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCA
AGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATGACACGCAGG
TACATGACGGACATGATCACTTATGCTGACACTGATGTGGTAGTGGTTGG
TGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCA
ACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCG
TGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCCA
CATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAACTATG
TTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTC
CTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGACTT
GATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGCGTTGG
TGTCAATGAATCACGATACACAGTCTTGCATGGATCCCAATGTAATGGAA
GCGAAGGTGGTTGTGAGCTCTTGTGGCCATGATGGGCCTTTTGGGGCCAC
TGGAGTAAAGAGGTTGAAGAGTATCGGAATGATTGAGGAAGTGCCTGGAA
TGAAGGCACTGGACATGAACTCTGCAGAAGATGCTATTGTGAGGCTGACC
CAGGGAGTTGTGCCTGGTATGATAGTTACCGGCATGGAAAGTGCCCGAGA
TGATGGTGCTCCTCGAATGGGGCAACATTTGGAGCATGATGATATCGGGG
CAAAAGCTGCGCATTTTGCGTTGAATCACCTGG
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