EY711187

Overview
NameEY711187
Unique NameEY711187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.634e-52
Identity = 88/147 (59.86%), Postives = 115/147 (78.23%), Query Frame = 1
Query:  232 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            A+G  +   SLYVGDL  +VT++ LY+ FS  G ++S+RVCRD++TRRSLGY Y+N+  PADA RALD +NF  +  + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS+FGNILSCK+  D  G S+G+GFV FE +
Sbjct:    3 ATGAGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQ 148          

HSP 2 Score: 41.2022 bits (95), Expect = 1.634e-52
Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQEREL 769
            + AI  +NGML ND++VFVGHF   +EREL
Sbjct:  152 NRAIQTMNGMLLNDRKVFVGHFKSRREREL 181          

HSP 3 Score: 89.3521 bits (220), Expect = 9.353e-18
Identity = 49/143 (34.27%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIRKSGT----GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            ++++ +LD ++ +  LYD FS  G +LS +V  D     S GYG+V++     A RA+  +N   LN++ + + +  S R+  +          N++IKN  + +D K L + FS+FGN LS K+  D +G+S+GFGFV + N
Sbjct:  100 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCD--EHGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGN 240          

HSP 4 Score: 22.3274 bits (46), Expect = 9.353e-18
Identity = 8/27 (29.63%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+ ++NG   N + ++VG   +  ER+
Sbjct:  247 AVSEMNGKEVNGRMIYVGRAQKRIERQ 273          

HSP 5 Score: 86.6557 bits (213), Expect = 5.869e-17
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T++Y+ +   ++ D +L ++FS  G  LSV+V  D  T RS G+G+VNY N  +A +A+  +N   +N + I +  + +                   I +    N+++KNLD  ID   L   FS +G I S K+ T+G G SKGFGFV F +
Sbjct:  191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG-GHSKGFGFVCFSS 342          

HSP 6 Score: 22.3274 bits (46), Expect = 5.869e-17
Identity = 10/41 (24.39%), Postives = 24/41 (58.54%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQEREL*Q*NKFITYLS 802
            + A+ ++NG + + K ++V    R +ER+    N+++  L+
Sbjct:  347 TKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRLA 387          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.003e-52
Identity = 87/138 (63.04%), Postives = 112/138 (81.16%), Query Frame = 1
Query:  253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD  TRRSLGY YVNY N AD  RAL+ LN+T +  +  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D  G SKG+GFV +E
Sbjct:   54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYE 191          

HSP 2 Score: 38.5058 bits (88), Expect = 8.003e-52
Identity = 16/28 (57.14%), Postives = 22/28 (78.57%), Query Frame = 2
Query:  683 NAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            NAI  +NGML NDK+VFVGH +  ++R+
Sbjct:  198 NAIKHVNGMLLNDKKVFVGHHIAKKDRQ 225          

HSP 3 Score: 77.7962 bits (190), Expect = 6.887e-14
Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQF 663
            ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A  A+  +N   LN+K + + +  + +D   +    K+   N+++KN+D+    +   D F  FG I S  +A D  SG+S+GFGFV F
Sbjct:  144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNF 284          

HSP 4 Score: 20.7866 bits (42), Expect = 6.887e-14
Identity = 8/27 (29.63%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A++ LN   +  ++++VG   +  ERE
Sbjct:  293 AVEALNDKDFKGQKLYVGRAQKKHERE 319          

HSP 5 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 44/144 (30.56%), Postives = 76/144 (52.78%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQS 639
            T++YV ++D + T+ +  DLF + G++ S  + RD  + +S G+G+VN+ +  +AA A++ LN      + +   R    H R+  +RK                N++IKNL   ID + L + FSS+G I S K+  D + +S
Sbjct:  236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRDFAPES 379          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.362e-51
Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1
Query:  232 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            A+G  +   SLY+GDL  +VT++ LY+ FS  G ++S+RVCRD++TRRSL Y Y+N+  PADA RALD +NF  +  + IRIM+S RDP +RKSG GN+FIKNLD+SID+KAL+DTFS+FGNILSCK+  D  G S+G+GFV FE
Sbjct:    3 ATGAGYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFE 146          

HSP 2 Score: 41.2022 bits (95), Expect = 1.362e-51
Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQEREL 769
            + AI  +NGML ND++VFVGHF   +EREL
Sbjct:  152 NRAIQTMNGMLLNDRKVFVGHFKSRREREL 181          

HSP 3 Score: 90.1225 bits (222), Expect = 5.533e-18
Identity = 50/143 (34.97%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIRKSGT----GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            ++++ +LD ++ +  LYD FS  G +LS +V  D     S GYG+V++     A RA+  +N   LN++ + + +  S R+  +          N++IKN  + +D K L + FS+FGN LS K+  D SG+S+GFGFV + N
Sbjct:  100 NVFIKNLDESIDNKALYDTFSAFGNILSCKVVCD--EHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGN 240          

HSP 4 Score: 22.3274 bits (46), Expect = 5.533e-18
Identity = 8/27 (29.63%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+ ++NG   N + ++VG   +  ER+
Sbjct:  247 AVSEMNGKEVNGRMIYVGRAQKRIERQ 273          

HSP 5 Score: 82.8037 bits (203), Expect = 8.074e-16
Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T++Y+ +   ++ D +L ++FS  G  LSV+V  D  + RS G+G+VNY N  +A +A+  +N   +N + I +  + +                   I +    N+++KNLD  ID   L   F  +G I S K+ T+G G SKGFGFV F +
Sbjct:  191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG-GHSKGFGFVCFSS 342          

HSP 6 Score: 22.3274 bits (46), Expect = 8.074e-16
Identity = 10/41 (24.39%), Postives = 24/41 (58.54%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQEREL*Q*NKFITYLS 802
            + A+ ++NG + + K ++V    R +ER+    N+++  L+
Sbjct:  347 TKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRLA 387          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PAP1A_DICDI (Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 2.317e-51
Identity = 91/141 (64.54%), Postives = 113/141 (80.14%), Query Frame = 1
Query:  250 LTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            +++SLYVGDL   V++  L+++F+QVG V ++RVCRD +TRRSL Y YVNY N ADA RALD LN TP+  K+ RIM+S RDPS+RKSG GN+FIKNLDK IDHKAL+DTFS+FGNILSCK+ TD    SKGFGFV +E +
Sbjct:    8 ISSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERALDTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQ 148          

HSP 2 Score: 30.8018 bits (68), Expect = 2.317e-51
Identity = 14/26 (53.85%), Postives = 19/26 (73.08%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQER 763
            AI K+NGM+ N ++VFVG F   +ER
Sbjct:  154 AIAKVNGMMINGQKVFVGPFKSSKER 179          

HSP 3 Score: 71.633 bits (174), Expect = 6.523e-12
Identity = 43/146 (29.45%), Postives = 69/146 (47.26%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKNLLK 684
            ++++ +LD  +    LYD FS  G +LS +V  D     S G+G+V+Y     A +A+  +N   +N + + +        R        T N+F KNL + +    L +    +G I +  I  D  G+SKGFGF  FE+    K
Sbjct:   99 NVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTD-DGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQPTEVKFT-NVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAK 242          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 5.126e-51
Identity = 85/147 (57.82%), Postives = 114/147 (77.55%), Query Frame = 1
Query:  232 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            A+  ++   SLY+GDL  +VT++ LY+ FS  G ++S+RVCRD++TRRSLGY Y+N+  PADA RALD +NF  +  + IRIM+S RDP +RKSG GN+FIKNLD SID+KAL+DTFS+FG+ILSCK+  D  G S+G+GFV FE +
Sbjct:    3 ATRAEYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG-SRGYGFVHFETQ 148          

HSP 2 Score: 41.2022 bits (95), Expect = 5.126e-51
Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQEREL 769
            + AI  +NGML ND++VFVGHF   +EREL
Sbjct:  152 NRAIQTMNGMLLNDRKVFVGHFKSRREREL 181          

HSP 3 Score: 90.5077 bits (223), Expect = 4.256e-18
Identity = 50/144 (34.72%), Postives = 84/144 (58.33%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRV-CRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIRKSGT----GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            ++++ +LD ++ +  LYD FS  G +LS +V C +  +R   GYG+V++     A RA+  +N   LN++ + + +  S R+  +          N++IKN  + +D K L + FS+FGN LS K+  D SG+S+GFGFV + N
Sbjct:  100 NVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSR---GYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGN 240          

HSP 4 Score: 22.3274 bits (46), Expect = 4.256e-18
Identity = 9/27 (33.33%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+ ++NG   N + V+VG   +  ER+
Sbjct:  247 AVTEMNGKEVNGRMVYVGRAQKRIERQ 273          

HSP 5 Score: 84.3445 bits (207), Expect = 2.830e-16
Identity = 50/154 (32.47%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR----------------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T++Y+ +   ++ D +L ++FS  G  LSV+V  D ++ RS G+G+VNY N  +A +A+  +N   +N + + +  + +                   I +    N+++KNLD  ID   L   FS +G I S K+ T+G G SKGFGFV F +
Sbjct:  191 TNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG-GHSKGFGFVCFSS 342          

HSP 6 Score: 22.3274 bits (46), Expect = 2.830e-16
Identity = 10/41 (24.39%), Postives = 24/41 (58.54%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQEREL*Q*NKFITYLS 802
            + A+ ++NG + + K ++V    R +ER+    N+++  L+
Sbjct:  347 TKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRLA 387          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 6.678e-51
Identity = 87/147 (59.18%), Postives = 118/147 (80.27%), Query Frame = 1
Query:  223 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            AA A G   ++ SLYVG+LD +VT++ L+++F+ +G V S+RVCRD  TRRSLGY YVNY N AD  RAL+ LN++ +  +S RIM+S RDP++RK+G GNIFIKNLD+SID+KALHDTF++FG+ILSCK+ TD +G+S+GF FV +
Sbjct:   35 AAAAPGGNTVSASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHY 181          

HSP 2 Score: 34.6538 bits (78), Expect = 6.678e-51
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQER 763
            AI  +NGML NDK+V+VGH +  +ER
Sbjct:  190 AIKAVNGMLLNDKKVYVGHHVGKKER 215          

HSP 3 Score: 88.5817 bits (218), Expect = 5.157e-17
Identity = 53/154 (34.42%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI-------------RIMYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T++Y+ ++D  VTD++  DL    G  +SV + RD     S G+G+VNY N   A +A+D LN   +N K +              +  SH +  +    KS   N+++KNLD   D   L   F +FG I S K+  D SG S+GFGFV + +
Sbjct:  227 TNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRD-EKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSS 379          

HSP 4 Score: 72.0182 bits (175), Expect = 9.437e-13
Identity = 42/144 (29.17%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYS-------HRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            ++++ +LD ++ +  L+D F+  G +LS +V  D    +S G+ +V+Y+    A  A+  +N   LN+K + + +         +   +R   T N++IKN+D  +      D    FG  +S  ++ D  G SKGFGFV +EN
Sbjct:  135 NIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRAQFT-NVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYEN 276          

HSP 5 Score: 22.7126 bits (47), Expect = 9.437e-13
Identity = 10/27 (37.04%), Postives = 15/27 (55.56%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+D+LN    N K+++ G      ERE
Sbjct:  283 AVDELNEKEVNGKKLYAGRAQTKSERE 309          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3)

HSP 1 Score: 184.496 bits (467), Expect = 1.478e-50
Identity = 85/138 (61.59%), Postives = 111/138 (80.43%), Query Frame = 1
Query:  253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            + SLYVG+LD +VT++ L++LFS +GQV S+RVCRD  TRRSLGY YVNY +  D  +AL+ LN+T +  K  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D  G SKG+GFV +E
Sbjct:   47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYE 184          

HSP 2 Score: 37.3502 bits (85), Expect = 1.478e-50
Identity = 16/28 (57.14%), Postives = 22/28 (78.57%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQER 763
            +NAI  +NGML N+K+VFVGH +  +ER
Sbjct:  190 NNAIKHVNGMLLNEKKVFVGHHIPKKER 217          

HSP 3 Score: 77.0258 bits (188), Expect = 1.104e-14
Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIR--------KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A  A+  +N   LN K  ++   H  P           K+   NI++KN+D  +  +   + F   G+I S  IA D  G+S+GFGFV +
Sbjct:  137 NVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEK--KVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNY 276          

HSP 4 Score: 24.2534 bits (51), Expect = 1.104e-14
Identity = 10/35 (28.57%), Postives = 20/35 (57.14%), Query Frame = 2
Query:  662 LRTRICSNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            +R    + A+D LN + +  ++++VG   +  ERE
Sbjct:  277 IRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHERE 311          

HSP 5 Score: 69.707 bits (169), Expect = 2.479e-11
Identity = 44/136 (32.35%), Postives = 68/136 (50.00%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKI 615
            T++YV ++D +VTD    +LF + G + S  + RD    +S G+G+VNY     AA A+D LN      + +   R    H R+  +RK                N++IKNL+  +D + L D F+ FG I S K+
Sbjct:  229 TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARD-DQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKV 363          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 2.513e-50
Identity = 87/148 (58.78%), Postives = 113/148 (76.35%), Query Frame = 1
Query:  226 AGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            A  SG    + SLYVG+LD +VT++ L++LF+ +G V S+RVCRD  TRRSLGY YVN+ N  D  +ALD LN+T +  +  RIM+S RDPS+RK GTGN+FIKNLD +ID+KALHDTFS+FG ILSCK+A D  G +KG+GFV F++
Sbjct:   70 ATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDS 217          

HSP 2 Score: 36.965 bits (84), Expect = 2.513e-50
Identity = 15/27 (55.56%), Postives = 22/27 (81.48%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI+ +NGML NDK+V+VGH +  +ER+
Sbjct:  224 AIEHVNGMLLNDKKVYVGHHVSRRERQ 250          

HSP 3 Score: 92.4337 bits (228), Expect = 3.571e-18
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 657
            T++Y+ +LD  +T+ +  DLF Q G++ S+ + +D + +   G+G+VNYAN   A +A+D LN      K +   R    H R+  +RK                N+FIKNL   +D + L   FS+FG I S KI TD  G+SKGFGFV
Sbjct:  261 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPR-GFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFV 409          

HSP 4 Score: 77.411 bits (189), Expect = 1.771e-15
Identity = 45/145 (31.03%), Postives = 79/145 (54.48%), Query Frame = 1
Query:  253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY--SHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T ++++ +LD  + +  L+D FS  G++LS +V  D     + GYG+V++ +   A  A++ +N   LN+K + + +  S R+   +    K+   N++IKNLD  I  +   D F  FG I S  +  D + + +GFGFV + N
Sbjct:  167 TGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYAN 310          

HSP 5 Score: 26.5646 bits (57), Expect = 1.771e-15
Identity = 11/27 (40.74%), Postives = 17/27 (62.96%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+D+LN   Y  K+++VG   +  ERE
Sbjct:  317 AVDELNDKEYKGKKLYVGRAQKKHERE 343          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_NEUCR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.264e-50
Identity = 86/138 (62.32%), Postives = 111/138 (80.43%), Query Frame = 1
Query:  253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD  TRRSLGY YVNY   AD  +AL+ LN+T +  +  RIM+S RDP++RK+G GNIFIKNLD +ID+KALHDTF++FGNILSCK+A D  G SKG+GFV +E
Sbjct:   59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYE 196          

HSP 2 Score: 34.6538 bits (78), Expect = 4.264e-50
Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            S AI  +NGML N+K+V+VGH +  ++R+
Sbjct:  202 SQAIKHVNGMLLNEKKVYVGHHIPKKDRQ 230          

HSP 3 Score: 78.5666 bits (192), Expect = 1.358e-15
Identity = 42/143 (29.37%), Postives = 76/143 (53.15%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSI--------RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A++A+  +N   LN K + +   H  P           K+   N+++KN++  +  +   + F+ FG + S  +A D  G+S+GFGFV F
Sbjct:  149 NIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYV--GHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNF 288          

HSP 4 Score: 25.7942 bits (55), Expect = 1.358e-15
Identity = 10/29 (34.48%), Postives = 18/29 (62.07%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + A+D+LNG  +  + ++VG   +  ERE
Sbjct:  295 AQAVDELNGKDFRGQDLYVGRAQKKHERE 323          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.558e-50
Identity = 85/138 (61.59%), Postives = 112/138 (81.16%), Query Frame = 1
Query:  253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD  TRRSLGY YVNY   AD  +AL+ LN+T +  +  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D +G SKG+GFV +E
Sbjct:   60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYE 197          

HSP 2 Score: 34.6538 bits (78), Expect = 5.558e-50
Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            S AI  +NGML N+K+V+VGH +  ++R+
Sbjct:  203 SQAIKHVNGMLLNEKKVYVGHHIPKKDRQ 231          

HSP 3 Score: 76.6406 bits (187), Expect = 2.028e-13
Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD 624
            T++YV +++  VTD +   LF + G V S  + RD  T +S G+G+VN+ +  DA++A+  LN    + +++   R    H R+  +RKS               N++IKNLD  +D + L   FS FG I S K+  D
Sbjct:  242 TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRD 380          

HSP 4 Score: 72.0182 bits (175), Expect = 1.221e-12
Identity = 42/144 (29.17%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSI--------RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQF 663
            ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     A++A+  +N   LN K + +   H  P           K+   NI++KN++  +        F  +G++ S  +A D  +G+S+GFGFV F
Sbjct:  150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYV--GHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNF 290          

HSP 5 Score: 22.3274 bits (46), Expect = 1.221e-12
Identity = 9/29 (31.03%), Postives = 17/29 (58.62%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            S A+ +LN   ++ + ++VG   +  ERE
Sbjct:  297 SKAVQELNEKEFHGQNLYVGRAQKKHERE 325          
The following BLAST results are available for this feature:
BLAST of EY711187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
EPAB_XENTR1.634e-5259.86Embryonic polyadenylate-binding protein OS=Xenopus... [more]
PABP_COCIM8.003e-5263.04Polyadenylate-binding protein, cytoplasmic and nuc... [more]
EPABA_XENLA1.362e-5159.31Embryonic polyadenylate-binding protein A OS=Xenop... [more]
PAP1A_DICDI2.317e-5164.54Polyadenylate-binding protein 1-A OS=Dictyostelium... [more]
EPABB_XENLA5.126e-5157.82Embryonic polyadenylate-binding protein B OS=Xenop... [more]
PABP_CRYNE6.678e-5159.18Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_PHANO1.478e-5061.59Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_SCHPO2.513e-5058.78Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_NEUCR4.264e-5062.32Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_MAGGR5.558e-5061.59Polyadenylate-binding protein, cytoplasmic and nuc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711187 ID=EY711187; Name=EY711187; organism=Citrus sinensis; type=EST; length=879bp
CACTGGTACACCTTCGGCACTATTCCGGAATTCCCTATCCGACCCACGCG
TCCGATAGAATCAGATTATCTTATCCTGTTATCTCTCTAGATTTTTATTT
GAGAACTAGCAAGAGAAGAGGGAAATAAAAAAGCCAAAAAAAAAAAGAAG
GATCTAGAAGTGGTAGTGATGGCACAGATTCAGGTGCAACATCAAGCGCA
AATGTCGGGGCCAAACGGAGTGGCGGCGGGTGCGTCAGGGAACCAGTTCC
TAACGACGTCTCTTTATGTTGGCGATCTCGATTTCAACGTGACCGATTCG
CAGCTTTATGATCTGTTCAGCCAGGTCGGTCAAGTTCTGTCGGTTAGGGT
TTGTCGGGACCTGAGCACCAGGCGCTCACTCGGCTATGGTTACGTTAACT
ACGCCAACCCTGCAGATGCGGCAAGGGCACTGGATGTTCTTAACTTCACT
CCACTTAATAATAAGTCCATTAGAATCATGTATTCCCATCGGGATCCTAG
TATTCGGAAAAGCGGTACTGGGAACATATTTATCAAGAATTTGGACAAGT
CTATTGATCACAAAGCATTACACGATACATTTTCTTCATTCGGAAACATT
CTTTCTTGTAAGATAGCTACTGATGGTTCTGGCCAGTCCAAAGGTTTCGG
TTTTGTGCAATTTGAGAACAAGAATCTGCTCAAATGCTATTGATAAGTTA
AATGGCATGCTTTATAATGATAAACAAGTGTTTGTTGGGCACTTTCTTCG
TANGCAGGAAAGAGAACTGTAGCAATAAAACAAATTCATAACGTATTTGT
CAAAAACCTGCTGAGTCACTACGATGAAGATTGAAGAAATTTTTGGTGAG
TTGGAACAATACCATGCANTANTGATGAG
back to top