EY711187

Overview
NameEY711187
Unique NameEY711187
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_YARLI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.459e-50
Identity = 88/147 (59.86%), Postives = 116/147 (78.91%), Query Frame = 1
Query:  229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            G+  +Q    SLYVG+LD +VT++ L+++F+ +G V SVRVCRD  TRRSLGY YVN+ N AD  RAL+ LN++P+  +  RIM+S RDP++RK+G GNI+IKNLD +ID+KALHDTFS+FG ILSCKIATD  G S+GFGFV +E+
Sbjct:   37 GSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYES 183          

HSP 2 Score: 31.9574 bits (71), Expect = 9.459e-50
Identity = 25/69 (36.23%), Postives = 33/69 (47.83%), Query Frame = 2
Query:  683 NAIDKLNGMLYNDKQVFVGHFLRXQEREL---*Q*NKFITYLSKT--C*VTTMKIEEI---FGELEQYH 865
            +AI  +NGML NDK+VFVG  +   +R      Q N F     K     +T  + EE+   FGE    H
Sbjct:  189 SAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVH 257          

HSP 3 Score: 73.559 bits (179), Expect = 1.717e-12
Identity = 44/146 (30.14%), Postives = 76/146 (52.05%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----RIMYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKNL 678
            ++Y+ +LD  + +  L+D FS  GQ+LS ++  D     S G+G+V+Y +   A  A+  +N   LN+K +     +  S R  S   +K+   N+FIKNL   I      +  + FG   S  ++T+  G+  GFGFV ++  ++
Sbjct:  135 NIYIKNLDPAIDNKALHDTFSAFGQILSCKIATD-EFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDV 279          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.962e-48
Identity = 83/137 (60.58%), Postives = 112/137 (81.75%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            TSLYVG+LD +VT++ L+++FS +G V S+RVCRD  TRRSLGY YVN+ N AD  RA++ LN++ + N+  RIM+S RDP++R++G GNIFIKNLD  ID+KALHDTF++FGNILSCK+AT+ +G S G+GFV +E
Sbjct:   47 TSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYE 182          

HSP 2 Score: 35.8094 bits (81), Expect = 2.962e-48
Identity = 15/27 (55.56%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI  +NGML NDK+V+VGH +  +ER+
Sbjct:  190 AIKHVNGMLLNDKKVYVGHHIPRKERQ 216          

HSP 3 Score: 82.4185 bits (202), Expect = 3.695e-15
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSIRKSGTG--NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKN 675
            ++++ +LD  + +  L+D F+  G +LS +V  + +   SLGYG+V+Y     A  A+  +N   LN+K + + +      R   I ++     N++ KN+D  +        F+ FG I SC +  D  G+SKGFGFV FE+ N
Sbjct:  136 NIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG--SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHN 278          

HSP 4 Score: 77.7962 bits (190), Expect = 9.102e-14
Identity = 47/150 (31.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 657
            T++Y  ++D  VTD +   LF++ G++ S  + RD    +S G+G+VN+ +  +A +A+D L+ +    + + +      S R+  +R+S               N+++KN+ +S D + L + F+ FG I SCKI    SG S+GFGFV
Sbjct:  227 TNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRD-EDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFV 375          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.024e-48
Identity = 84/138 (60.87%), Postives = 113/138 (81.88%), Query Frame = 1
Query:  253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD  TRRSLGY YVNY + +D  +AL+ LN+T +  +  RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D +G SKG+GFV +E
Sbjct:   64 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYE 201          

HSP 2 Score: 28.8758 bits (63), Expect = 5.024e-48
Identity = 11/29 (37.93%), Postives = 21/29 (72.41%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + AI  +N ML N+K+V+VG+ +  ++R+
Sbjct:  207 AQAIKHVNNMLLNEKKVYVGYHIPKKDRQ 235          

HSP 3 Score: 81.2629 bits (199), Expect = 1.667e-16
Identity = 44/141 (31.21%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYS--HRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            ++++ +LD  + +  L+D F+  G +LS +V +D     S GYG+V+Y     AA+A+  +N   LN K + + Y    +D   +    K+   NI++KN+      +   D F+ +G++ S  +A D  G+S+GFGFV F
Sbjct:  154 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNF 293          

HSP 4 Score: 26.1794 bits (56), Expect = 1.667e-16
Identity = 12/37 (32.43%), Postives = 21/37 (56.76%), Query Frame = 2
Query:  659 NLRTRICS-NAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            N  T  C+  A+++LNG  +  + ++VG   +  ERE
Sbjct:  292 NFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHERE 328          

HSP 5 Score: 68.1662 bits (165), Expect = 7.212e-11
Identity = 48/152 (31.58%), Postives = 74/152 (48.68%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKI----ATDGSGQSKGFG 651
            T++YV ++    TD +  DLF++ G V S  + RD S  +S G+G+VN+     AA+A++ LN      + +   R    H R+  +RKS               N++IKNL   ID   L   FS +G I S K+     T+GS + +  G
Sbjct:  246 TNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARD-SEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEG 396          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.115e-47
Identity = 85/142 (59.86%), Postives = 110/142 (77.46%), Query Frame = 1
Query:  241 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            ++ ++ SLYVGDLD +V+++ LYD+FS +G V S+RVCRD  T+ SLGY YVN+ +   A  A++ LNFTP+  K  RIM+S RDPS+RK G GNIFIKNL   ID+KAL+DTFS FGNILS K+ATD +G+SKGFG+V FE
Sbjct:   30 SETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFE 171          

HSP 2 Score: 35.4242 bits (80), Expect = 1.115e-47
Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            S AID LNGML N ++++VG  L  +ERE
Sbjct:  177 SEAIDALNGMLLNGQEIYVGPHLSKKERE 205          

HSP 3 Score: 80.1073 bits (196), Expect = 1.834e-14
Identity = 48/152 (31.58%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSH----RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            T++Y+ +++   TD +  +L ++ G+  SV V        + G+G+VN+ N  DA + ++ LN T    + + +  +     R   ++K                N+FIKNLD SID K L + F+ +G I S K+ T  +G+SKGFGFV F
Sbjct:  216 TNVYIKNINTETTDKEFEELVAKFGKTDSV-VLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCF 366          

HSP 4 Score: 76.6406 bits (187), Expect = 2.028e-13
Identity = 46/150 (30.67%), Postives = 78/150 (52.00%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----RIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN-KNLLKC 687
            ++++ +L  ++ +  LYD FS  G +LS +V  D  T +S G+GYV++     A+ A+D LN   LN + I     +    R+      K+   N++IKN++     K   +  + FG   S  +     G++KGFGFV F N ++ +KC
Sbjct:  124 NIFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKC 272          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.893e-47
Identity = 87/158 (55.06%), Postives = 115/158 (72.78%), Query Frame = 1
Query:  196 AQMSGPNGVAAGASGNQFLTT-SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            A  S P G     S N   +T SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD  +++SLGY YVNY    D  +A++ LN++P+  +  RIM+S RDPS R+SG GNIFIKNL  +ID+KALHDTFS+FG ILSCK+ATD  GQSK FGFV +E
Sbjct:   31 AAESAPAGEEGADSANVAESTASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATDDMGQSKCFGFVHYE 188          

HSP 2 Score: 34.6538 bits (78), Expect = 1.893e-47
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI+ +NGML ND++VFVG  +  ++RE
Sbjct:  196 AIENVNGMLLNDREVFVGKHISKKDRE 222          

HSP 3 Score: 83.5741 bits (205), Expect = 1.659e-15
Identity = 50/154 (32.47%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI---------------MYSH-RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T++YV ++D   ++  L  LF+  G + S+ + +D +  +S G+G+VNY     A +A++ LN   +N + I +                Y + R   + K    N+FIKNLD +ID + L + F  FG I S ++  D +G+SKGFGFV F +
Sbjct:  233 TNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKD-AEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSS 385          

HSP 4 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            ++++ +L   + +  L+D FS  G++LS +V  D    +S  +G+V+Y     A  A++ +N   LN++ + +    S +D   +    K+   NI++KN+D     + L   F+ +G I S  +  D  G+SKGFGFV +E
Sbjct:  141 NIFIKNLHPAIDNKALHDTFSTFGKILSCKVATD-DMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYE 281          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 7.118e-47
Identity = 84/150 (56.00%), Postives = 116/150 (77.33%), Query Frame = 1
Query:  217 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            G  AG  G +  + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD  T++SLGY YVN+   AD +RA++ LN++ ++ +  RIM+S RDPS+R++G GNIFIKNL  +ID+KALHDTFS+FG ILSCK+ATD  GQSK FGFV +E
Sbjct:   46 GEGAGEEGEE-ASASLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDELGQSKCFGFVHYE 194          

HSP 2 Score: 34.2686 bits (77), Expect = 7.118e-47
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI+ +NGML ND++VFVG  +  ++RE
Sbjct:  202 AIENVNGMLLNDREVFVGKHVSKRDRE 228          

HSP 3 Score: 79.337 bits (194), Expect = 3.128e-14
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            T++YV +L   V +++  ++F   G V SV +  D    +S G+G+VN+ N   A  A+  +N   ++ + +                R+  S R   + K    N+F+KNLD SID + L + F  FG I S ++  D +G+SKGFGFV F +
Sbjct:  239 TNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETD-QEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSS 391          

HSP 4 Score: 76.6406 bits (187), Expect = 2.028e-13
Identity = 44/143 (30.77%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            ++++ +L   + +  L+D FS  G++LS +V  D    +S  +G+V+Y     A  A++ +N   LN++ + +    S RD   +    K+   N+++KNL   +D+    + F  FG + S  + TD  G+S+GFGFV FEN
Sbjct:  147 NIFIKNLHPAIDNKALHDTFSAFGRILSCKVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFEN 288          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PAP1M_HUMAN (Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.413e-47
Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            SLYVGDL   VT++ LY+ FS  G +LS+R+CRD  TRRSLGY YVNY  P DA RAL+ LNF  +  + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A D  G  KG+GFV F+ +
Sbjct:    3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQ 139          

HSP 2 Score: 32.7278 bits (73), Expect = 9.413e-47
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AID +NGM  N +++FVG F   +ERE
Sbjct:  145 AIDVMNGMFLNYRKIFVGRFKSHKERE 171          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.576e-46
Identity = 84/156 (53.85%), Postives = 115/156 (73.72%), Query Frame = 1
Query:  199 QMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            Q +   G ++G + N   + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD  +++SLGY YVNY    D  +A++ LN+ P+  +  RIM+S RDPS R+SG GNIFIKNL  +ID+KALHDTFS+FG ILSCK+ATD  GQSK FGFV +E
Sbjct:   36 QSAEEQGESSGVAEN---SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQSKCFGFVHYE 188          

HSP 2 Score: 34.6538 bits (78), Expect = 1.576e-46
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI+ +NGML ND++VFVG  +  ++RE
Sbjct:  196 AIENVNGMLLNDREVFVGKHISKKDRE 222          

HSP 3 Score: 85.5001 bits (210), Expect = 4.365e-16
Identity = 48/152 (31.58%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRD----------------PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            T++YV ++D N ++     LFS  G++ S+ + +D    +S G+G+VN+ +   A +A++ LN   +N + I +  + +                   + K    N+F+KNLD +ID + L + F  FG I S K+  D +G+SKGFGFV F
Sbjct:  233 TNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKD-QDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCF 383          

HSP 4 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 44/143 (30.77%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            ++++ +L   + +  L+D FS  G++LS +V  D    +S  +G+V+Y     A  A++ +N   LN++ + +    S +D   +    K+   NI++KN+D +   ++    FS FG I S  +  D  G+SKGFGFV FE+
Sbjct:  141 NIFIKNLHPAIDNKALHDTFSAFGKILSCKVATD-EFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFED 282          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.311e-45
Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = 1
Query:  253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            T SLYVGDL  +VT++ LY+ FS  G +LS+R+CRDL T  S  Y YVN+ +  DA  ALD +NF  +  K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILSC +  D +G SKG+GFV FE
Sbjct:   10 TASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFE 146          

HSP 2 Score: 35.4242 bits (80), Expect = 1.311e-45
Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI K+NGML N ++VFVG F   +ERE
Sbjct:  154 AIKKMNGMLLNGRKVFVGQFKSRKERE 180          

HSP 3 Score: 85.1149 bits (209), Expect = 3.273e-18
Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            +++V +LD ++ +  LYD  S  G +LS  V  D     S GYG+V++     A RA+  +N   LN + + +        R+  +  R     N++IKN  + +D + L D F  FG  LS K+ TD SG+SKGFGFV FE
Sbjct:  100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCD--ENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFE 239          

HSP 4 Score: 28.1054 bits (61), Expect = 3.273e-18
Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            A+D++NG   N KQ++VG   +  ER+
Sbjct:  247 AVDEMNGKELNGKQIYVGRAQKKVERQ 273          

HSP 5 Score: 86.6557 bits (213), Expect = 1.675e-16
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 1
Query:  229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669
            GA   +F   ++Y+ +   ++ D +L DLF + G  LSV+V  D S + S G+G+V++    DA +A+D +N   LN K I                R     +   I +    N+++KNLD  ID + L   FS FG I S K+  +G G+SKGFGFV F +
Sbjct:  184 GARAKEF--PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSS 342          

HSP 6 Score: 20.7866 bits (42), Expect = 1.675e-16
Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 2
Query:  680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766
            + A+ ++NG +   K ++V    R +ER+
Sbjct:  347 TKAVTEMNGRIVATKPLYVALAQRKEERQ 375          
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.708e-45
Identity = 84/159 (52.83%), Postives = 116/159 (72.96%), Query Frame = 1
Query:  196 AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672
            A  +   G ++G + N   + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD  +++SLGY YVNY    D  +A++ LN+TP+  +  RIM+S RDPS R+SG GNIFIKNL  +ID+KALHDTFS+FG ILS K+ATD  GQSK FGFV +E +
Sbjct:   50 ADSAEEQGESSGIAEN---SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETE 205          

HSP 2 Score: 33.113 bits (74), Expect = 1.708e-45
Identity = 13/27 (48.15%), Postives = 21/27 (77.78%), Query Frame = 2
Query:  686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766
            AI+ +NGML ND++V+VG  +  ++RE
Sbjct:  211 AIESVNGMLLNDREVYVGKHVSKKDRE 237          

HSP 3 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 48/152 (31.58%), Postives = 83/152 (54.61%), Query Frame = 1
Query:  256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRD----------------PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663
            T++YV ++D   T+ +  +LF+  G++ S+ + +D +  +S G+G+VN+     AA+A++ LN   +N + I +  + +                   + K    N+F+KNLD+ ID + L + F  FG I S K+  D +G+SKGFGFV F
Sbjct:  248 TNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKD-AEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCF 398          

HSP 4 Score: 77.0258 bits (188), Expect = 1.553e-13
Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666
            ++++ +L   + +  L+D FS  G++LSV+V  D    +S  +G+V+Y     A  A++ +N   LN++ + +    S +D   +    K+   NI++KN+D +   K   + F+ FG I S  +  D  G+SKGFGFV FE
Sbjct:  156 NIFIKNLHPAIDNKALHDTFSAFGKILSVKVATD-DLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFE 296          
The following BLAST results are available for this feature:
BLAST of EY711187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PABP_YARLI9.459e-5059.86Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_USTMA2.962e-4860.58Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_CHAGB5.024e-4860.87Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_CANGA1.115e-4759.86Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_PICST1.893e-4755.06Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_PICGU7.118e-4756.00Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PAP1M_HUMAN9.413e-4760.87Polyadenylate-binding protein 1-like 2 OS=Homo sap... [more]
PABP_CANAL1.576e-4653.85Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP3_HUMAN1.311e-4559.42Polyadenylate-binding protein 3 OS=Homo sapiens GN... [more]
PABP_LODEL1.708e-4552.83Polyadenylate-binding protein, cytoplasmic and nuc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711187 ID=EY711187; Name=EY711187; organism=Citrus sinensis; type=EST; length=879bp
CACTGGTACACCTTCGGCACTATTCCGGAATTCCCTATCCGACCCACGCG
TCCGATAGAATCAGATTATCTTATCCTGTTATCTCTCTAGATTTTTATTT
GAGAACTAGCAAGAGAAGAGGGAAATAAAAAAGCCAAAAAAAAAAAGAAG
GATCTAGAAGTGGTAGTGATGGCACAGATTCAGGTGCAACATCAAGCGCA
AATGTCGGGGCCAAACGGAGTGGCGGCGGGTGCGTCAGGGAACCAGTTCC
TAACGACGTCTCTTTATGTTGGCGATCTCGATTTCAACGTGACCGATTCG
CAGCTTTATGATCTGTTCAGCCAGGTCGGTCAAGTTCTGTCGGTTAGGGT
TTGTCGGGACCTGAGCACCAGGCGCTCACTCGGCTATGGTTACGTTAACT
ACGCCAACCCTGCAGATGCGGCAAGGGCACTGGATGTTCTTAACTTCACT
CCACTTAATAATAAGTCCATTAGAATCATGTATTCCCATCGGGATCCTAG
TATTCGGAAAAGCGGTACTGGGAACATATTTATCAAGAATTTGGACAAGT
CTATTGATCACAAAGCATTACACGATACATTTTCTTCATTCGGAAACATT
CTTTCTTGTAAGATAGCTACTGATGGTTCTGGCCAGTCCAAAGGTTTCGG
TTTTGTGCAATTTGAGAACAAGAATCTGCTCAAATGCTATTGATAAGTTA
AATGGCATGCTTTATAATGATAAACAAGTGTTTGTTGGGCACTTTCTTCG
TANGCAGGAAAGAGAACTGTAGCAATAAAACAAATTCATAACGTATTTGT
CAAAAACCTGCTGAGTCACTACGATGAAGATTGAAGAAATTTTTGGTGAG
TTGGAACAATACCATGCANTANTGATGAG
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