EY711187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_YARLI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 9.459e-50 Identity = 88/147 (59.86%), Postives = 116/147 (78.91%), Query Frame = 1 Query: 229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 G+ +Q SLYVG+LD +VT++ L+++F+ +G V SVRVCRD TRRSLGY YVN+ N AD RAL+ LN++P+ + RIM+S RDP++RK+G GNI+IKNLD +ID+KALHDTFS+FG ILSCKIATD G S+GFGFV +E+ Sbjct: 37 GSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYES 183 HSP 2 Score: 31.9574 bits (71), Expect = 9.459e-50 Identity = 25/69 (36.23%), Postives = 33/69 (47.83%), Query Frame = 2 Query: 683 NAIDKLNGMLYNDKQVFVGHFLRXQEREL---*Q*NKFITYLSKT--C*VTTMKIEEI---FGELEQYH 865 +AI +NGML NDK+VFVG + +R Q N F K +T + EE+ FGE H Sbjct: 189 SAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVH 257 HSP 3 Score: 73.559 bits (179), Expect = 1.717e-12 Identity = 44/146 (30.14%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----RIMYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKNL 678 ++Y+ +LD + + L+D FS GQ+LS ++ D S G+G+V+Y + A A+ +N LN+K + + S R S +K+ N+FIKNL I + + FG S ++T+ G+ GFGFV ++ ++ Sbjct: 135 NIYIKNLDPAIDNKALHDTFSAFGQILSCKIATD-EFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDV 279
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.962e-48 Identity = 83/137 (60.58%), Postives = 112/137 (81.75%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 TSLYVG+LD +VT++ L+++FS +G V S+RVCRD TRRSLGY YVN+ N AD RA++ LN++ + N+ RIM+S RDP++R++G GNIFIKNLD ID+KALHDTF++FGNILSCK+AT+ +G S G+GFV +E Sbjct: 47 TSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYE 182 HSP 2 Score: 35.8094 bits (81), Expect = 2.962e-48 Identity = 15/27 (55.56%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AI +NGML NDK+V+VGH + +ER+ Sbjct: 190 AIKHVNGMLLNDKKVYVGHHIPRKERQ 216 HSP 3 Score: 82.4185 bits (202), Expect = 3.695e-15 Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSIRKSGTG--NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKN 675 ++++ +LD + + L+D F+ G +LS +V + + SLGYG+V+Y A A+ +N LN+K + + + R I ++ N++ KN+D + F+ FG I SC + D G+SKGFGFV FE+ N Sbjct: 136 NIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG--SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHN 278 HSP 4 Score: 77.7962 bits (190), Expect = 9.102e-14 Identity = 47/150 (31.33%), Postives = 82/150 (54.67%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFV 657 T++Y ++D VTD + LF++ G++ S + RD +S G+G+VN+ + +A +A+D L+ + + + + S R+ +R+S N+++KN+ +S D + L + F+ FG I SCKI SG S+GFGFV Sbjct: 227 TNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRD-EDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFV 375
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.024e-48 Identity = 84/138 (60.87%), Postives = 113/138 (81.88%), Query Frame = 1 Query: 253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 + SLYVG+LD +VT++ L++LFSQ+G V S+RVCRD TRRSLGY YVNY + +D +AL+ LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D +G SKG+GFV +E Sbjct: 64 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYE 201 HSP 2 Score: 28.8758 bits (63), Expect = 5.024e-48 Identity = 11/29 (37.93%), Postives = 21/29 (72.41%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 + AI +N ML N+K+V+VG+ + ++R+ Sbjct: 207 AQAIKHVNNMLLNEKKVYVGYHIPKKDRQ 235 HSP 3 Score: 81.2629 bits (199), Expect = 1.667e-16 Identity = 44/141 (31.21%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYS--HRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 ++++ +LD + + L+D F+ G +LS +V +D S GYG+V+Y AA+A+ +N LN K + + Y +D + K+ NI++KN+ + D F+ +G++ S +A D G+S+GFGFV F Sbjct: 154 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNF 293 HSP 4 Score: 26.1794 bits (56), Expect = 1.667e-16 Identity = 12/37 (32.43%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 659 NLRTRICS-NAIDKLNGMLYNDKQVFVGHFLRXQERE 766 N T C+ A+++LNG + + ++VG + ERE Sbjct: 292 NFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHERE 328 HSP 5 Score: 68.1662 bits (165), Expect = 7.212e-11 Identity = 48/152 (31.58%), Postives = 74/152 (48.68%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI---RIMYSH-RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKI----ATDGSGQSKGFG 651 T++YV ++ TD + DLF++ G V S + RD S +S G+G+VN+ AA+A++ LN + + R H R+ +RKS N++IKNL ID L FS +G I S K+ T+GS + + G Sbjct: 246 TNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARD-SEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEG 396
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.115e-47 Identity = 85/142 (59.86%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 241 NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++ ++ SLYVGDLD +V+++ LYD+FS +G V S+RVCRD T+ SLGY YVN+ + A A++ LNFTP+ K RIM+S RDPS+RK G GNIFIKNL ID+KAL+DTFS FGNILS K+ATD +G+SKGFG+V FE Sbjct: 30 SETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFE 171 HSP 2 Score: 35.4242 bits (80), Expect = 1.115e-47 Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 S AID LNGML N ++++VG L +ERE Sbjct: 177 SEAIDALNGMLLNGQEIYVGPHLSKKERE 205 HSP 3 Score: 80.1073 bits (196), Expect = 1.834e-14 Identity = 48/152 (31.58%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSH----RDPSIRKSGTG------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 T++Y+ +++ TD + +L ++ G+ SV V + G+G+VN+ N DA + ++ LN T + + + + R ++K N+FIKNLD SID K L + F+ +G I S K+ T +G+SKGFGFV F Sbjct: 216 TNVYIKNINTETTDKEFEELVAKFGKTDSV-VLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCF 366 HSP 4 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 46/150 (30.67%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----RIMYSHRDPSIR--KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN-KNLLKC 687 ++++ +L ++ + LYD FS G +LS +V D T +S G+GYV++ A+ A+D LN LN + I + R+ K+ N++IKN++ K + + FG S + G++KGFGFV F N ++ +KC Sbjct: 124 NIFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKC 272
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.893e-47 Identity = 87/158 (55.06%), Postives = 115/158 (72.78%), Query Frame = 1 Query: 196 AQMSGPNGVAAGASGNQFLTT-SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 A S P G S N +T SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YVNY D +A++ LN++P+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILSCK+ATD GQSK FGFV +E Sbjct: 31 AAESAPAGEEGADSANVAESTASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATDDMGQSKCFGFVHYE 188 HSP 2 Score: 34.6538 bits (78), Expect = 1.893e-47 Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AI+ +NGML ND++VFVG + ++RE Sbjct: 196 AIENVNGMLLNDREVFVGKHISKKDRE 222 HSP 3 Score: 83.5741 bits (205), Expect = 1.659e-15 Identity = 50/154 (32.47%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI---------------MYSH-RDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 T++YV ++D ++ L LF+ G + S+ + +D + +S G+G+VNY A +A++ LN +N + I + Y + R + K N+FIKNLD +ID + L + F FG I S ++ D +G+SKGFGFV F + Sbjct: 233 TNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKD-AEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSS 385 HSP 4 Score: 69.3218 bits (168), Expect = 3.237e-11 Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +L + + L+D FS G++LS +V D +S +G+V+Y A A++ +N LN++ + + S +D + K+ NI++KN+D + L F+ +G I S + D G+SKGFGFV +E Sbjct: 141 NIFIKNLHPAIDNKALHDTFSTFGKILSCKVATD-DMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYE 281
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 7.118e-47 Identity = 84/150 (56.00%), Postives = 116/150 (77.33%), Query Frame = 1 Query: 217 GVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 G AG G + + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD T++SLGY YVN+ AD +RA++ LN++ ++ + RIM+S RDPS+R++G GNIFIKNL +ID+KALHDTFS+FG ILSCK+ATD GQSK FGFV +E Sbjct: 46 GEGAGEEGEE-ASASLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDELGQSKCFGFVHYE 194 HSP 2 Score: 34.2686 bits (77), Expect = 7.118e-47 Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AI+ +NGML ND++VFVG + ++RE Sbjct: 202 AIENVNGMLLNDREVFVGKHVSKRDRE 228 HSP 3 Score: 79.337 bits (194), Expect = 3.128e-14 Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 T++YV +L V +++ ++F G V SV + D +S G+G+VN+ N A A+ +N ++ + + R+ S R + K N+F+KNLD SID + L + F FG I S ++ D +G+SKGFGFV F + Sbjct: 239 TNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETD-QEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSS 391 HSP 4 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 44/143 (30.77%), Postives = 78/143 (54.55%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 ++++ +L + + L+D FS G++LS +V D +S +G+V+Y A A++ +N LN++ + + S RD + K+ N+++KNL +D+ + F FG + S + TD G+S+GFGFV FEN Sbjct: 147 NIFIKNLHPAIDNKALHDTFSAFGRILSCKVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFEN 288
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PAP1M_HUMAN (Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 9.413e-47 Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 SLYVGDL VT++ LY+ FS G +LS+R+CRD TRRSLGY YVNY P DA RAL+ LNF + + +RIM+S RDPS+RKSG GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A D G KG+GFV F+ + Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQ 139 HSP 2 Score: 32.7278 bits (73), Expect = 9.413e-47 Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AID +NGM N +++FVG F +ERE Sbjct: 145 AIDVMNGMFLNYRKIFVGRFKSHKERE 171
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.576e-46 Identity = 84/156 (53.85%), Postives = 115/156 (73.72%), Query Frame = 1 Query: 199 QMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 Q + G ++G + N + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YVNY D +A++ LN+ P+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILSCK+ATD GQSK FGFV +E Sbjct: 36 QSAEEQGESSGVAEN---SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQSKCFGFVHYE 188 HSP 2 Score: 34.6538 bits (78), Expect = 1.576e-46 Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AI+ +NGML ND++VFVG + ++RE Sbjct: 196 AIENVNGMLLNDREVFVGKHISKKDRE 222 HSP 3 Score: 85.5001 bits (210), Expect = 4.365e-16 Identity = 48/152 (31.58%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRD----------------PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 T++YV ++D N ++ LFS G++ S+ + +D +S G+G+VN+ + A +A++ LN +N + I + + + + K N+F+KNLD +ID + L + F FG I S K+ D +G+SKGFGFV F Sbjct: 233 TNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKD-QDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCF 383 HSP 4 Score: 73.1738 bits (178), Expect = 2.242e-12 Identity = 44/143 (30.77%), Postives = 78/143 (54.55%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 ++++ +L + + L+D FS G++LS +V D +S +G+V+Y A A++ +N LN++ + + S +D + K+ NI++KN+D + ++ FS FG I S + D G+SKGFGFV FE+ Sbjct: 141 NIFIKNLHPAIDNKALHDTFSAFGKILSCKVATD-EFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFED 282
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.311e-45 Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = 1 Query: 253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 T SLYVGDL +VT++ LY+ FS G +LS+R+CRDL T S Y YVN+ + DA ALD +NF + K +RIM+S RDPS+RKSG GNIF+KNLDKSI++KAL+DT S+FGNILSC + D +G SKG+GFV FE Sbjct: 10 TASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFE 146 HSP 2 Score: 35.4242 bits (80), Expect = 1.311e-45 Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AI K+NGML N ++VFVG F +ERE Sbjct: 154 AIKKMNGMLLNGRKVFVGQFKSRKERE 180 HSP 3 Score: 85.1149 bits (209), Expect = 3.273e-18 Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSI--RKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 +++V +LD ++ + LYD S G +LS V D S GYG+V++ A RA+ +N LN + + + R+ + R N++IKN + +D + L D F FG LS K+ TD SG+SKGFGFV FE Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCNVVCD--ENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFE 239 HSP 4 Score: 28.1054 bits (61), Expect = 3.273e-18 Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 A+D++NG N KQ++VG + ER+ Sbjct: 247 AVDEMNGKELNGKQIYVGRAQKKVERQ 273 HSP 5 Score: 86.6557 bits (213), Expect = 1.675e-16 Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 229 GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI----------------RIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 GA +F ++Y+ + ++ D +L DLF + G LSV+V D S + S G+G+V++ DA +A+D +N LN K I R + I + N+++KNLD ID + L FS FG I S K+ +G G+SKGFGFV F + Sbjct: 184 GARAKEF--PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSS 342 HSP 6 Score: 20.7866 bits (42), Expect = 1.675e-16 Identity = 8/29 (27.59%), Postives = 17/29 (58.62%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQERE 766 + A+ ++NG + K ++V R +ER+ Sbjct: 347 TKAVTEMNGRIVATKPLYVALAQRKEERQ 375
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.708e-45 Identity = 84/159 (52.83%), Postives = 116/159 (72.96%), Query Frame = 1 Query: 196 AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENK 672 A + G ++G + N + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YVNY D +A++ LN+TP+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILS K+ATD GQSK FGFV +E + Sbjct: 50 ADSAEEQGESSGIAEN---SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETE 205 HSP 2 Score: 33.113 bits (74), Expect = 1.708e-45 Identity = 13/27 (48.15%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 AI+ +NGML ND++V+VG + ++RE Sbjct: 211 AIESVNGMLLNDREVYVGKHVSKKDRE 237 HSP 3 Score: 85.8853 bits (211), Expect = 3.342e-16 Identity = 48/152 (31.58%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRD----------------PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 T++YV ++D T+ + +LF+ G++ S+ + +D + +S G+G+VN+ AA+A++ LN +N + I + + + + K N+F+KNLD+ ID + L + F FG I S K+ D +G+SKGFGFV F Sbjct: 248 TNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKD-AEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCF 398 HSP 4 Score: 77.0258 bits (188), Expect = 1.553e-13 Identity = 45/142 (31.69%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +L + + L+D FS G++LSV+V D +S +G+V+Y A A++ +N LN++ + + S +D + K+ NI++KN+D + K + F+ FG I S + D G+SKGFGFV FE Sbjct: 156 NIFIKNLHPAIDNKALHDTFSAFGKILSVKVATD-DLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFE 296 The following BLAST results are available for this feature:
BLAST of EY711187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711187 ID=EY711187; Name=EY711187; organism=Citrus sinensis; type=EST; length=879bpback to top |