EY711187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP5_HUMAN (Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.041e-38 Identity = 77/142 (54.23%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 244 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 ++L +LYVGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF +N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ Sbjct: 14 KYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDS 154 HSP 2 Score: 27.335 bits (59), Expect = 1.041e-38 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQER 763 + AI +NG+ N++QV+VG F +ER Sbjct: 159 NRAIWHMNGVRLNNRQVYVGRFKFPEER 186 HSP 3 Score: 80.4925 bits (197), Expect = 1.404e-14 Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +LD ++ + L+ LFS G +LS +V D S GY YV++ + A A RA+ +N LNN+ + + R +R ++ N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.041e-38 Identity = 77/142 (54.23%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 244 QFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 ++L +LYVGDLD +VT+ LY F G + R+CRD TR LGYGYVN+ PADA AL+ +NF +N K R+M+S D +RKSG GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ Sbjct: 14 KYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDS 154 HSP 2 Score: 27.335 bits (59), Expect = 1.041e-38 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 2 Query: 680 SNAIDKLNGMLYNDKQVFVGHFLRXQER 763 + AI +NG+ N++QV+VG F +ER Sbjct: 159 NRAIWHMNGVRLNNRQVYVGRFKFPEER 186 HSP 3 Score: 80.4925 bits (197), Expect = 1.404e-14 Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIR---KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFE 666 ++++ +LD ++ + L+ LFS G +LS +V D S GY YV++ + A A RA+ +N LNN+ + + R +R ++ N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.671e-36 Identity = 71/151 (47.02%), Postives = 104/151 (68.87%), Query Frame = 1 Query: 223 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKN 675 A+ + + +T SLYVGDL +VT+ LYD F++ + SVR+C+D S+ RSL YGY N+ + DA A++ N + LN K IR+M+S R P R++G GN+F+KNL +S+ + L D F FGNI+SCK+AT G+S+G+GFVQFE ++ Sbjct: 13 ASSSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQED 163 HSP 2 Score: 26.9498 bits (58), Expect = 2.671e-36 Identity = 10/26 (38.46%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQER 763 AI LN + DK+++VG F++ +R Sbjct: 168 AIQTLNSTIVADKEIYVGKFMKKTDR 193 HSP 3 Score: 84.3445 bits (207), Expect = 9.725e-16 Identity = 48/152 (31.58%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRK------------SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQF 663 T+LY+ +LD +V++ L + F++ G+++S+ + +D R GY +VN+ NP DA RA + +N T +K + + + R+ +R+ + NI++KN++ ++ + L FS G I S K+ D G+SKGFGFV F Sbjct: 201 TNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCF 351 HSP 4 Score: 73.1738 bits (178), Expect = 9.461e-13 Identity = 43/139 (30.94%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 +++V +L +VT++ L D+F + G ++S +V L +S GYG+V + A A+ LN T + +K I + D + N+++KNLD + L + F+ FG I+S IA D + +G+ FV F+N Sbjct: 113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVAT-LEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDN 250 HSP 5 Score: 21.557 bits (44), Expect = 9.461e-13 Identity = 9/27 (33.33%), Postives = 15/27 (55.56%), Query Frame = 2 Query: 686 AIDKLNGMLYNDKQVFVGHFLRXQERE 766 A + +NG + K ++VG + ERE Sbjct: 257 AAETVNGTKFGSKCLYVGRAQKKAERE 283
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PABP_ENCCU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Encephalitozoon cuniculi GN=PAB1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23 Identity = 60/142 (42.25%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 259 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKNLLK 684 ++YVG+L DS L+ +FS VG+VLSV++ + S + +V + N DA RA+ L+N+ IR+M P TGNIF+KNL + K L D FS FG I+SCK+AT G+SKG+GFVQF+ K K Sbjct: 15 TIYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS--FAFVTFENEEDAERAIREYKHYELHNRQIRVMKKDERPP----ETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVATTSHGKSKGYGFVQFKEKKAAK 150
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: PES4_YEAST (Protein PES4 OS=Saccharomyces cerevisiae GN=PES4 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 5.324e-22 Identity = 57/150 (38.00%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 262 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN----KNLLKCY 690 L++GDL VT+ L +F + +S +VC D T++SLG+GY+N+ + +A +A++ LN+T +N K IRIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK+ K GFV FE+ +N++K Y Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVIKMY 237
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: ELAV3_MOUSE (ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21 Identity = 54/156 (34.62%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 211 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENK 672 PNG G +G T+L V L N+T + LF +G + S ++ RD T +SLGYG+VNY++P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K + FS +G I++ +I D +G S+G GF++F+ + Sbjct: 23 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKR 176
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 5.886e-21 Identity = 54/156 (34.62%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 211 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 672 PNG G +G T+L V L N+T + LF +G + S ++ RD T +SLGYG+VNY++P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K + FS +G I++ +I D +G S+G GF++F+ + Sbjct: 23 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKR 176
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: ELAV_DROVI (Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20 Identity = 62/187 (33.16%), Postives = 102/187 (54.55%), Query Frame = 1 Query: 169 MAQIQVQHQAQMSGPNGVAAGA----SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLST-------------RRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSG--QSKGFGFVQFENK 672 + Q QVQ Q Q + NG + GA +G+ T+L V L +T+ ++ LFS VG++ SV++ RD S +SLGYG+VNY P DA +A++VLN L NK+I++ ++ PS N+++ L K++ + L F+ FG I++ +I + Q+KG GF++F+ + Sbjct: 152 VVQQQVQQQVQQANTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR--PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKR 336
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.311e-20 Identity = 52/148 (35.14%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 232 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 672 +S + T+L V L N+T +L LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I D +G S+G GF++F+ + Sbjct: 59 SSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKR 204
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: ELAV3_XENLA (ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.713e-20 Identity = 53/158 (33.54%), Postives = 92/158 (58.23%), Query Frame = 1 Query: 202 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 672 ++G NG A + T+L V L N+T + LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ +L K+++ K + FS +G I++ +I D +G S+G GF++F+ + Sbjct: 22 LNGTNGEADDSK------TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKR 171 The following BLAST results are available for this feature:
BLAST of EY711187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711187 ID=EY711187; Name=EY711187; organism=Citrus sinensis; type=EST; length=879bpback to top |