EY711187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: ELV1A_XENLA (ELAV-like protein 1-A OS=Xenopus laevis GN=elavl1-A PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.571e-18 Identity = 52/152 (34.21%), Postives = 86/152 (56.58%), Query Frame = 1 Query: 256 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRD-----------LSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKN 675 T+L V L N+T +L LFS +G+V S ++ RD LS SLGYG+VNY N DA RA++ LN L +K+I++ ++ PS N++I L +++ K + D F FG+I++ ++ D +G S+G F++F+ ++ Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFAR--PSSESIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRS 169
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: MIP6_YEAST (RNA-binding protein MIP6 OS=Saccharomyces cerevisiae GN=MIP6 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17 Identity = 50/153 (32.68%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 253 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN----KNLLKCY 690 T SL++G+L VT+ L +F + S +VCRD T++SLGYGY+N+ + DA A N+T + ++IM S ++ RK+ N+F NL + + ++ + +GN+LSC + + K GFV F+N +N++K Y Sbjct: 110 TNSLFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEFNYTVFFGQEVKIMPSMKNTLFRKNIGTNVFFSNLPLENPQLTTRSFYLIMIEYGNVLSCLLE-----RRKNIGFVYFDNDISARNVIKKY 257
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: SXL_MEGSC (Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 9.725e-16 Identity = 47/147 (31.97%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 235 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENK 672 SG T+L V L ++ D +LY LF +G + + R+ RD T S GYG+V++ + ADA RA++ LN + NK I++ ++ P + N+++ NL +SI + L F +G I+ I D +G +G F++F + Sbjct: 71 SGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFAR--PGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKR 215
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: ELAV4_XENTR (ELAV-like protein 4 OS=Xenopus tropicalis GN=elavl4 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.659e-15 Identity = 53/184 (28.80%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 211 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR-----------------------------RSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 672 P+ + GA+ + T+L V L N+T + LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I D +G S+G GF++F+ + Sbjct: 37 PSPMQTGAATDDS-KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEEHFKDLATGTKWKPLTEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKR 217
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: ELAV4_XENLA (ELAV-like protein 4 OS=Xenopus laevis GN=elavl4 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.659e-15 Identity = 53/184 (28.80%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 211 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR-----------------------------RSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENK 672 P+ + GA+ + T+L V L N+T + LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I D +G S+G GF++F+ + Sbjct: 37 PSPMQTGAATDDS-KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEENFKDLATGTKWKPLTEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKR 217
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: RBMS2_BOVIN (RNA-binding motif, single-stranded-interacting protein 2 OS=Bos taurus GN=RBMS2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15 Identity = 47/169 (27.81%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 163 VVMAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 V ++Q S PN + + +Q T+LY+ L + TD L L G+++S + D +T + GYG+V++ +P+ A +A+ L + + + + +DP+ N++I NL S+D + L FG ++S +I D SG S+G GF + E+ Sbjct: 25 VSLSQQMAPPSPSSSTPNSSSGSTAHDQLSKTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFARMES 184
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: RBMS1_BOVIN (RNA-binding motif, single-stranded-interacting protein 1 OS=Bos taurus GN=RBMS1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15 Identity = 48/156 (30.77%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 205 SGPNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 S N ++ SG +Q T+LY+ L N TD L L G+++S + D +T + GYG+V++ +PA A +A+ L + + + + +DP+ N++I NL S+D + L + FG ++S +I D SG S+G GF + E+ Sbjct: 44 SNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMES 190
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: RBMS2_HUMAN (RNA-binding motif, single-stranded-interacting protein 2 OS=Homo sapiens GN=RBMS2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.826e-15 Identity = 48/169 (28.40%), Postives = 82/169 (48.52%), Query Frame = 1 Query: 163 VVMAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 V +AQ S PN + +Q T+LY+ L TD L L G+++S + D +T + GYG+V++ +P+ A +A+ L + + + + +DP+ N++I NL S+D + L FG ++S +I D SG S+G GF + E+ Sbjct: 25 VSLAQQMAPPSPSNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFARMES 184
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: RBMS1_RAT (RNA-binding motif, single-stranded-interacting protein 1 OS=Rattus norvegicus GN=Rbms1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.826e-15 Identity = 47/156 (30.13%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 205 SGPNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 S N ++ SG +Q T+LY+ L N TD L L G+++S + D +T + GYG+V++ +PA A +A+ L + + + + +DP+ N++I NL S+D + L + FG ++S ++ D SG S+G GF + E+ Sbjct: 44 SNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGTSRGVGFARMES 190
BLAST of EY711187 vs. ExPASy Swiss-Prot
Match: RBMS1_MOUSE (RNA-binding motif, single-stranded-interacting protein 1 OS=Mus musculus GN=Rbms1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.303e-15 Identity = 47/156 (30.13%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 205 SGPNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFEN 669 S N ++ SG +Q T+LY+ L N TD L L G+++S + D +T + GYG+V++ +PA A +A+ L + + + +DP+ N++I NL S+D + L + FG ++S ++ D SG S+G GF + E+ Sbjct: 44 SNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKANGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGASRGVGFARMES 190 The following BLAST results are available for this feature:
BLAST of EY711187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711187 ID=EY711187; Name=EY711187; organism=Citrus sinensis; type=EST; length=879bpback to top |