EY711184

Overview
NameEY711184
Unique NameEY711184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711184 vs. ExPASy Swiss-Prot
Match: DNAK_LEPIN (Chaperone protein dnaK OS=Leptospira interrogans GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG++ KI I +  G LS+DEI+KMV++AE + A D+  ++ +EAKN L+   Y++  TV +   G K+   +K+   D I +A + ++SN  A     E     +  I   I +K+Y
Sbjct:  489 TGKEQKIRIESSSG-LSEDEIQKMVKDAEAHAAADKAQREVIEAKNELDTLTYSLEKTVNE--AGDKIGANEKQLATDEIKRAREAIESNDKA---RIESAKASISKIATDIASKVY 599          
BLAST of EY711184 vs. ExPASy Swiss-Prot
Match: DNAK_LEPIC (Chaperone protein dnaK OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG++ KI I +  G LS+DEI+KMV++AE + A D+  ++ +EAKN L+   Y++  TV +   G K+   +K+   D I +A + ++SN  A     E     +  I   I +K+Y
Sbjct:  489 TGKEQKIRIESSSG-LSEDEIQKMVKDAEAHAAADKAQREVIEAKNELDTLTYSLEKTVNE--AGDKIGANEKQLATDEIKRAREAIESNDKA---RIESAKASISKIATDIASKVY 599          
BLAST of EY711184 vs. ExPASy Swiss-Prot
Match: DNAK_BACLD (Chaperone protein dnaK OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            TG++  ITI +  G LS DEIE+MV+EAE+    D + K+++E +N  +   +    T+KD  +  K D A  KK  +A D     ++ N L   DE + K  EL++I   +  K+Y+
Sbjct:  463 TGKEQNITIKSSSG-LSDDEIERMVKEAEENAEADAKKKEEIELRNEADQLVFTTEKTLKD--LEGKADEAQVKKANEAKDALKAAIEKNDL---DEIKAKKDELQAIVQELSMKLYE 574          
BLAST of EY711184 vs. ExPASy Swiss-Prot
Match: DNAK_THEYD (Chaperone protein dnaK OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.493e-11
Identity = 36/118 (30.51%), Postives = 72/118 (61.02%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 358
            TG++  I IT   G LS++EI+KM++EAE +  ED   K+  EA+N  +N  Y +  T++D  +G ++   ++K+IE+AI++  +  D++   + +E +  ++EL    + +  ++Y+
Sbjct:  488 TGKEQSIRITASSG-LSEEEIKKMIREAEAHAEEDRRKKQIAEARNEADNMIYTVEKTLRD--MGDRISEDERKRIEEAIEKCRRIKDTSN--DVNEIKAAVEELAKASHRVAEELYK 600          
BLAST of EY711184 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSF (Chaperone protein dnaK OS=Geobacter sp. (strain FRC-32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.493e-11
Identity = 38/118 (32.20%), Postives = 74/118 (62.71%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED---AIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAK 349
            TG++  I IT   G LSK+EI+KMV+EAE + +ED++ ++ +EA+N  ++  Y+   ++ +   G K+D A+K+KIE+   A+ +A++  D++ + +A   ++ M+    +   + AK
Sbjct:  488 TGKEQSIRITASSG-LSKEEIDKMVREAESHASEDKKKRELIEARNQADSLVYSTEKSLSE--FGDKIDAAEKQKIEEGLAALKKAMEGNDADAIKKAS--DELMQASHKLAEAVYAK 600          
The following BLAST results are available for this feature:
BLAST of EY711184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
DNAK_LEPIN6.503e-1134.19Chaperone protein dnaK OS=Leptospira interrogans G... [more]
DNAK_LEPIC6.503e-1134.19Chaperone protein dnaK OS=Leptospira interrogans s... [more]
DNAK_BACLD6.503e-1134.75Chaperone protein dnaK OS=Bacillus licheniformis (... [more]
DNAK_THEYD8.493e-1130.51Chaperone protein dnaK OS=Thermodesulfovibrio yell... [more]
DNAK_GEOSF8.493e-1132.20Chaperone protein dnaK OS=Geobacter sp. (strain FR... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-G10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711184 ID=EY711184; Name=EY711184; organism=Citrus sinensis; type=EST; length=615bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAG
GCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATGAATTTGA
AGACAAGATGAAGGAGCTTGAGAGCATCTGCAATCCCATCATTGCCAAGA
TGTATCAAGGTGCTGGTGGTGATATGGGCGGTGGCATGGATGATGATGCT
CCTCCAGCTGGTGGCAGTGCCGCCGGTCCCAAGATTGAGGAAGTTGACTA
AGCTTCCAGTTTTAATTTTGTGTGGTTGTGGGAGGTCGGTTTTTTGACGG
TGGGAAAACTGGACGTTTGGTTTTTATCTTATGTTGTTTTAGCCTTAGGA
TGAATATAAATTTTCCTTTTCCTTTTATTTTTCAATTTTACTTTAAAAAA
AAAAAAAAAAAAAAA
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