EY711179

Overview
NameEY711179
Unique NameEY711179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 2
Query:  470 FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGD 796
            FE  + FG  GA  ++N    E +L  + L+ +PN G +   CNSW+++    K+ R+FF N  YLPS TP  L +YR  EL +LRG+GTG+RK +DRIYDYDVYNDLG+
Sbjct:  111 FEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEELEVLRGDGTGKRKDFDRIYDYDVYNDLGN 220          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25
Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  440 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGD 796
            G G   +  +FE     G  GA  ++N    E YLK + L+ +PN G +   CNSW+++    K  R+FF N  Y+PS+TP  L  YR  EL  LRG+G GERK +DRIYDYDVYNDLG+
Sbjct:  105 GAGESAFNIQFEWDESMGIPGAFYIKNYMQVEFYLKSLTLEDVPNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAALVGYREEELKNLRGDGKGERKEHDRIYDYDVYNDLGN 224          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 49/107 (45.79%), Postives = 73/107 (68.22%), Query Frame = 2
Query:  488 FGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNR 805
            FG  GA +++N H  E +LK + L+ +PN G ++  CNSW++     K  R+FF N+ YLPS+TP  L++YR  EL  LRG+GTG+ + +DR+YDY  YNDLG+ ++
Sbjct:  104 FGVPGAFIIKNLHLNEFFLKSLTLEDVPNYGKIHFVCNSWVYPAFRYKSDRIFFANQAYLPSETPQPLRKYRENELVALRGDGTGKLEEWDRVYDYACYNDLGEPDK 210          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 2
Query:  500 GAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLGDQNRXLX*QGLCLXGNK-TLS*TCRTGRPR 880
            GA  ++N    E YLK + L+ +PN G ++  CNSW+++    K  R+FF N  YLPS+TP  L +YR  EL  +RG+G+GERK +DR+YDYDVYNDLG+ ++        L G+        RTGRP+
Sbjct:    3 GAFYIKNFMQVEFYLKSLTLEDIPNHGTIHFICNSWIYNSKVYKSDRIFFANNTYLPSETPAPLLKYREEELKNVRGDGSGERKEWDRVYDYDVYNDLGNPDKGAALARPVLGGSTLPYPRRGRTGRPK 131          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.757e-24
Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 2
Query:  407 IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLP-NGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGTGERKTYDRIYDYDVYNDLG 793
            ++D+   I +   G   ++  F+  + FG  GA L+ N H  E  LK + L+ +P +G V+  CNSW++        RVFF+NK YLP +TP  L +YR  EL  LRG G GE K +DR+YDY  YNDLG
Sbjct:   80 LEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLLKSLTLEDVPGHGRVHYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSLRGTGEGELKEWDRVYDYAYYNDLG 209          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.099e-22
Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  470 FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVT-----CNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNGT-GERKTYDRIYDYDVYNDLG 793
            F+     G   A +++N HH + YLK + L G P+G    T     CNSW++  H  +  RVFF+NK YLPS+TP+ +K  R  EL  LRGN   GE K +DR+YDY  YNDLG
Sbjct:  116 FDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDLG 229          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19
Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 2
Query:  446 GNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNG-TGERKTYDRIYDYDVYNDLGDQNR 805
            G   +   FE     G  GA++V N +  E +LK + LDG+P  G V    NSW++   + + +RVFF N  YLPS+ P  L  YR  EL ILRG+G  G  K +DRIY YD YNDLG  ++
Sbjct:   97 GESVFRVAFEWDESQGIPGAVVVTNSNRSEFFLKTLTLDGVPGKGTVVFVANSWIYPADNYQYERVFFANDTYLPSKMPAPLIPYRQEELNILRGDGKIGPYKEHDRIYRYDYYNDLGQPDK 218          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = 2
Query:  491 GEIGAILVENEHHKEMYLKDIVLDGLPN--GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNG-TGERKTYDRIYDYDVYNDLG 793
            G  GAI+V+N H  E +LK I LD +P   G V    NSW++     +  RVFF N  YLPSQ P  LK YR  EL  LRG+   G  + +DR+Y YDVYNDLG
Sbjct:  107 GVPGAIIVKNHHSNEFFLKTITLDDVPGRAGAVVFLANSWVYPADKYRYDRVFFANDAYLPSQMPAALKPYRDDELRNLRGDDQQGPYEEHDRVYRYDVYNDLG 210          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.690e-18
Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 2
Query:  440 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLP-NGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNG-TGERKTYDRIYDYDVYNDLGD 796
            G+       E+EV    G  GAI+V+N H  E +LK I LD +P +G V    NSW++     +  RVFF+N   LPS+ P  LK YR  EL  LRG+   G  + +DR+Y YDVYNDLG+
Sbjct:   89 GESKFGVTFEWEVEK-MGIPGAIIVKNNHAAEFFLKTITLDNVPGHGAVVFVANSWIYPASKYRYNRVFFSNDTSLPSKMPAALKPYRDDELRNLRGDDQQGPYQEHDRVYRYDVYNDLGE 208          
BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.045e-17
Identity = 54/122 (44.26%), Postives = 68/122 (55.74%), Query Frame = 2
Query:  440 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVT--CNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRGNG-TGERKTYDRIYDYDVYNDLGD 796
            G+       ++EV    G  GAI+V N H  E  LK I L  +P    N+T   NSW++   + +  RVFF N  YLPSQ P  LK YR  EL  LRG+   G  + +DRIY YDVYNDLG+
Sbjct:   91 GESKFGLTFDWEVEK-LGVPGAIVVNNYHSSEFLLKTITLHDVPGRSGNLTFVANSWIYPAANYRYSRVFFANDTYLPSQMPAALKPYRDDELRNLRGDDQQGPYQEHDRIYRYDVYNDLGE 211          
The following BLAST results are available for this feature:
BLAST of EY711179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXX_SOYBN8.825e-2549.09Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV... [more]
LOX2_SOYBN8.825e-2546.67Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOXB_SOLLC4.380e-2445.79Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]
LOXB_PHAVU4.380e-2444.19Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2... [more]
LOX1_ARATH9.757e-2442.31Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=... [more]
LOX5_ARATH4.099e-2245.61Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOX4_ORYSJ1.116e-1943.44Probable lipoxygenase 4 OS=Oryza sativa subsp. jap... [more]
LOX3_ORYSJ2.105e-1849.04Putative lipoxygenase 3 OS=Oryza sativa subsp. jap... [more]
LOX2_ORYSJ4.690e-1843.80Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOX1_HORVU1.045e-1744.26Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-G05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711179 ID=EY711179; Name=EY711179; organism=Citrus sinensis; type=EST; length=885bp
AATAATTCTAAAGCATCTTCTTCTTACTTGAAAAACAATGTTGAAGCCAC
AGGTTCATCAACCTCAATCTATCAAACCCCTATTTCCATTATCCAAGCCG
TTTCTCCATGGAAATTACGGCCATGCCTTTCGTCCAGTTCAATCAACTTC
TACACTTTTTAAAGGAAGTCCCAAACTTCGGATTGGTTCTGTTCCCAGAA
ACACTATCAAAGCTATAGCAACTTCCACTGAAAAATCAATCAAAGTTAAG
GCTGTTGTTACTGTGAAACCAACTGTGGGAGGCTTCCTCTCAAATATTTC
TTTAGACCAAGGGTTAGATGATCTTGGAGATTTGTTTGGTAAATCACTCC
TCTTGGAGCTTGTCAGTGCTGAGCTTGACCCCAAGACGGGATTGGATAAA
TCCACCATCCAAGATTATGCGCGCAAAATTGGTGCGGACGGGGATGGAAA
CATGCAATATGAATCAGAATTCGAAGTCCCATCTGGATTTGGAGAAATTG
GCGCAATATTAGTGGAAAATGAGCACCACAAAGAGATGTATTTGAAAGAT
ATTGTTCTTGATGGTTTGCCAAATGGTCCTGTCAACGTAACATGTAATTC
ATGGCTTCACTCAAAGCACGACAATAAACAAAAGAGAGTTTTCTTTACCA
ACAAGTTGTACTTGCCATCACAAACACCAGACGGATTGAAGAGATATAGA
GCTGANGAGCTTACCATTTTGCGAGGTAATGGGACAGGAGAGCGCAAAAC
CTATGATAGAATCTATGATTATGATGTCTACAATGATCTTGGAGATCAGA
ACAGAAANCTGAANTAGCAAGGNCTGTGCTTGGNAGGCAACAAAACCCTA
TCCTAGACGTGCAGAACTGGACGCCCACGTGTGAC
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