EY711179

Overview
NameEY711179
Unique NameEY711179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711179 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17
Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 2 
Query:  491 GEIGAILVENEHHKEMYLKDIVLDGLPNGPVNV-TCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAXELTILRG-NGTGERKTYDRIYDYDVYNDLGDQNR 805
            G  GAI+++N H  + +LK I L  +P     V   NSW++        R+FF N  YLPSQ P+ L+ YR  EL  LRG +  G  + +DRIY YDVYNDLG+ +R
Sbjct:  105 GVPGAIIIKNHHSTKFFLKTITLHDVPGCDTIVFVANSWIYPVGKYHYNRIFFANNSYLPSQMPEALRPYREDELRYLRGEDRQGPYQEHDRIYRYDVYNDLGEPDR 211
The following BLAST results are available for this feature:
BLAST of EY711179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX1_ORYSJ5.186e-1743.93Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-G05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711179 ID=EY711179; Name=EY711179; organism=Citrus sinensis; type=EST; length=885bp
AATAATTCTAAAGCATCTTCTTCTTACTTGAAAAACAATGTTGAAGCCAC
AGGTTCATCAACCTCAATCTATCAAACCCCTATTTCCATTATCCAAGCCG
TTTCTCCATGGAAATTACGGCCATGCCTTTCGTCCAGTTCAATCAACTTC
TACACTTTTTAAAGGAAGTCCCAAACTTCGGATTGGTTCTGTTCCCAGAA
ACACTATCAAAGCTATAGCAACTTCCACTGAAAAATCAATCAAAGTTAAG
GCTGTTGTTACTGTGAAACCAACTGTGGGAGGCTTCCTCTCAAATATTTC
TTTAGACCAAGGGTTAGATGATCTTGGAGATTTGTTTGGTAAATCACTCC
TCTTGGAGCTTGTCAGTGCTGAGCTTGACCCCAAGACGGGATTGGATAAA
TCCACCATCCAAGATTATGCGCGCAAAATTGGTGCGGACGGGGATGGAAA
CATGCAATATGAATCAGAATTCGAAGTCCCATCTGGATTTGGAGAAATTG
GCGCAATATTAGTGGAAAATGAGCACCACAAAGAGATGTATTTGAAAGAT
ATTGTTCTTGATGGTTTGCCAAATGGTCCTGTCAACGTAACATGTAATTC
ATGGCTTCACTCAAAGCACGACAATAAACAAAAGAGAGTTTTCTTTACCA
ACAAGTTGTACTTGCCATCACAAACACCAGACGGATTGAAGAGATATAGA
GCTGANGAGCTTACCATTTTGCGAGGTAATGGGACAGGAGAGCGCAAAAC
CTATGATAGAATCTATGATTATGATGTCTACAATGATCTTGGAGATCAGA
ACAGAAANCTGAANTAGCAAGGNCTGTGCTTGGNAGGCAACAAAACCCTA
TCCTAGACGTGCAGAACTGGACGCCCACGTGTGAC
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