EY711178

Overview
NameEY711178
Unique NameEY711178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_MACFA (40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 6.080e-51
Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR                          S  + +K ++R+K+  +   +EEQF  G+LLACI+SRPGQCGRADGY+LE  EL FY+++++
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_HUMAN (40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 6.080e-51
Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR                          S  + +K ++R+K+  +   +EEQF  G+LLACI+SRPGQCGRADGY+LE  EL FY+++++
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_DROME (40S ribosomal protein S8 OS=Drosophila melanogaster GN=RpS8 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.080e-51
Identity = 108/212 (50.94%), Postives = 136/212 (64.15%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749
            MGISRDS H                 +ELGR  ANTKL S + V ++R RGGN K RALRL+TGN++W SE V RKTRI DVVYNASNNELVRT+TLVK++IV +DA PF+QWY  HY + +GR                          S  V++K  +RQK   ++  +E+QF +GR+LACISSRPGQCGR+DGYILE  EL FY+K+++
Sbjct:    1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGR-VHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGR------KRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIK 205          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_BOVIN (40S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=2 SV=3)

HSP 1 Score: 201.445 bits (511), Expect = 6.080e-51
Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR                          S  + +K ++R+K+  +   +EEQF  G+LLACI+SRPGQCGRADGY+LE  EL FY+++++
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_SPOFR (40S ribosomal protein S8 OS=Spodoptera frugiperda GN=RpS8 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.769e-50
Identity = 108/212 (50.94%), Postives = 132/212 (62.26%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749
            MGISRD  H                 YELGR  ANTKL   + +  +R RGGN K+RALRLDTGN+SWGSE  TRK+RI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY  HY + +GR                          S    +K   RQ+   ++  +EEQF  GRLLAC++SRPGQCGRADGYILE  EL FY+++++
Sbjct:    1 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGGNTKYRALRLDTGNFSWGSECSTRKSRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGR--------KKGAKLTEAEDAIINKKRSQKTAKKYLARQRLSKVESALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 203          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_XENLA (40S ribosomal protein S8 OS=Xenopus laevis GN=rps8 PE=2 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 2.310e-50
Identity = 104/212 (49.06%), Postives = 133/212 (62.74%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749
            MGISRD+ H                 YE GR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ I+ VD+ PF+QW+  HY + +GR                          S    +K E+R+K   + P +EEQF  G+LLACI+SRPGQCGRADGY+LE  EL FY+++++
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYEPGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDAGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCILLVDSTPFRQWFEAHYALPLGR--------KKGAKLTPEEEEILNKKRSKKTQKKYEERKKTAKISPLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_DICDI (40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.691e-49
Identity = 108/216 (50.00%), Postives = 131/216 (60.65%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSN---KTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752
            MGISRD++H                 YELGRQ A TK+ S    K VR IRVRGG+ K+RALRLDTGN+SW +E +TRK RIL+VVYNA++N+LVRT TLVK +IVQ+DA P+KQWY  HYGV +G+                          S  ++ KL  R K R LD  IE Q G GR  A I+SRPGQ G+ DGYILE  EL FY + LQ+
Sbjct:    1 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFRALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETHYGVVVGK----------KKSAKKDGEAEQVVKKSASLLAKLASRAKGRVLDSAIESQIGEGRFFARITSRPGQVGKCDGYILEAKELEFYQRRLQK 206          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_THEPA (40S ribosomal protein S8 OS=Theileria parva GN=RPS8 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.656e-48
Identity = 105/214 (49.07%), Postives = 132/214 (61.68%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPH-IEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752
            MGISRDS H                 YELGR  +NTKL S K VR++R RGGN+K+RALRLD+GN+SWGS+ VTRKTR++DVVYNAS+NELVRT+TLVK+AIV VD  PFK W+  HYG+++G+                                  +  +K   L P  + +QF +GRLLACISSRPGQCGR DGY+LE  EL FY + + +
Sbjct:    1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-KLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGKSSEDP-----------------------------QASEKVAALVPRTLLDQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDK 184          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_GRIJA (40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.163e-48
Identity = 110/214 (51.40%), Postives = 132/214 (61.68%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDR-TLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752
            MGISRDS H                 YELGRQPA TK+   K VR +RVRGGN+K RALRL++GN++WGSEA T K+RIL+VVYNASNNELVRT T VK  I+Q+DA PF+Q+Y  HYG+DIG+                          S     K EKR + R  LD  I+E F +GRL A I+SRPGQ GRADGY+LE  EL FY K +Q+
Sbjct:    1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGG-KLVRTVRVRGGNLKSRALRLESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGK----------------KKAGDEESKFSKRHAGKQEKRCQTRLPLDEGIKELFQSGRLYASIASRPGQSGRADGYLLEGKELEFYAKAMQK 197          
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8B_SCHPO (40S ribosomal protein S8-B OS=Schizosaccharomyces pombe GN=rps8b PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.163e-48
Identity = 104/211 (49.29%), Postives = 128/211 (60.66%), Query Frame = 3
Query:  114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKEL 746
            MGI+RDS H                 +ELGRQP+NT++   K +  +RVRGGN K+RALRLD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY  HYG+ +G                           S HV RK   R  D  +D  +E QF AGRL A +SSRPGQ GR DGYILE  EL FY++ +
Sbjct:    1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------SKGKKATATPTPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196          
The following BLAST results are available for this feature:
BLAST of EY711178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RS8_MACFA6.080e-5148.5840S ribosomal protein S8 OS=Macaca fascicularis GN... [more]
RS8_HUMAN6.080e-5148.5840S ribosomal protein S8 OS=Homo sapiens GN=RPS8 P... [more]
RS8_DROME6.080e-5150.9440S ribosomal protein S8 OS=Drosophila melanogaste... [more]
RS8_BOVIN6.080e-5148.5840S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=... [more]
RS8_SPOFR1.769e-5050.9440S ribosomal protein S8 OS=Spodoptera frugiperda ... [more]
RS8_XENLA2.310e-5049.0640S ribosomal protein S8 OS=Xenopus laevis GN=rps8... [more]
RS8_DICDI5.691e-4950.0040S ribosomal protein S8 OS=Dictyostelium discoide... [more]
RS8_THEPA1.656e-4849.0740S ribosomal protein S8 OS=Theileria parva GN=RPS... [more]
RS8_GRIJA2.163e-4851.4040S ribosomal protein S8 OS=Griffithsia japonica G... [more]
RS8B_SCHPO2.163e-4849.2940S ribosomal protein S8-B OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-G04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711178 ID=EY711178; Name=EY711178; organism=Citrus sinensis; type=EST; length=947bp
GTCCCCCTTGGCACCGTTCCGGAATTCTCTGCTCGACCACGCGTCCGAGC
GGGAGCATTGCGAGAGTACGTTACAGTGAGCAGCGCCGCAGCAGCAGCTA
CAGCTCAGCCAAGATGGGTATTTCCAGAGATTCAATGCATAAGAGACGCG
CCACTGGTGGCAAGAAGAAAGCTTGGAGGAAGAAGCGCAAGTACGAACTT
GGTCGTCAGCCTGCAAATACCAAGCTCTCTAGCAACAAGACTGTACGGAG
AATTCGTGTCAGAGGAGGCAATGTGAAGTGGAGGGCCCTGAGACTGGACA
CTGGGAACTATTCCTGGGGTAGCGAGGCTGTCACCCGCAAGACCCGTATC
CTGGATGTTGTTTACAATGCCTCTAATAATGAGCTCGTCAGGACTCAAAC
TCTGGTGAAGAGTGCCATTGTGCAAGTGGATGCAGCGCCTTTTAAGCAAT
GGTACCTTCAGCACTATGGCGTTGACATTGGTAGGAAGAAGAAGGCAGTT
ACCAAGAAGGAAACCACAGAGGAGGGAGAAGGTGCAGCAGCAGCAGCAGA
AGAAACTAAGAAGAGCAATCATGTTGTTAGGAAGCTTGAAAAGCGCCAGA
AGGACCGCACACTCGATCCTCACATTGAAGAGCAATTTGGTGCTGGTAGG
TTGTTGGCCTGCATTTCTTCACGGCCAGGTCAATGTGGCAGAGCTGATGG
GTACATACTAGAANGGTAGGAGCTGGGATTTTACATGAAAGAGCTCCAGA
GAAAGAAGGGCAAGGGTGCAGGAGCCGCTGCTAAAAATCATTATGCCCAT
GCGNCTGNNTTGATCTTATAGTGATTTTGTTGGTTTATGTATGGGAACCT
GACGGGCTACATTAAAGAACATGAGGGGGATATGTTTAGATTTTTTTTTT
TTTTATGAAAACTTCTTTACATGTAAGGNTTCCAATAGAAACCGGGA
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