EY711178
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8A_SCHPO (40S ribosomal protein S8-A OS=Schizosaccharomyces pombe GN=rps8a PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.163e-48 Identity = 104/211 (49.29%), Postives = 128/211 (60.66%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKEL 746 MGI+RDS H +ELGRQP+NT++ K + +RVRGGN K+RALRLD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY HYG+ +G S HV RK R D +D +E QF AGRL A +SSRPGQ GR DGYILE EL FY++ + Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------SKGKKATSTPNPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_CAEEL (40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.689e-48 Identity = 103/212 (48.58%), Postives = 133/212 (62.74%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQ 749 MGISRDS H +ELGR ANTK+ +++ VR +R RGGN K+RALRLD+GN+SW SE TRKTRI+D +YNA+NNELVRT+TLVK AI+ VDAAPF+QWY HY + + R S+H ++K +RQK +D + EQF GRLLA ISS PGQ G+A+GYILE EL FY+++++ Sbjct: 1 MGISRDSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHR-VRLVRTRGGNEKYRALRLDSGNFSWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLAR--------KKNAKLSEEDNAILNKKRSHHTMKKYTERQKTAAVDALLIEQFNTGRLLARISSSPGQVGQANGYILEGKELDFYLRKIR 203
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_YEAST (40S ribosomal protein S8 OS=Saccharomyces cerevisiae GN=RPS8A PE=1 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 6.292e-48 Identity = 101/211 (47.87%), Postives = 126/211 (59.72%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKEL 746 MGISRDS H +ELGRQPANTK+ + K + +R RGGN K+RALR++TGN+SW SE +++KTRI VVY+ SNNELVRT TL K+AIVQ+DA PF+QW+ HYG +G+ S + RK R ++ +E QF AGRL ACISSRPGQ GR DGYILE EL FY++ L Sbjct: 1 MGISRDSRHKRSATGAKRAQFRKKRKFELGRQPANTKIGA-KRIHSVRTRGGNKKYRALRIETGNFSWASEGISKKTRIAGVVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQTLGK--------------KKNVKEEETVAKSKNAERKWAARAASAKIESSVESQFSAGRLYACISSRPGQSGRCDGYILEGEELAFYLRRL 196
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_THEAN (40S ribosomal protein S8 OS=Theileria annulata GN=RPS8 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 3.123e-47 Identity = 105/213 (49.30%), Postives = 129/213 (60.56%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752 MGISRDS H YELGR +NTKL S + VR++R RGGN+K+RALRLD+GN+SWGS+ VTRKTR++DVVYNAS+NELVRT+TLVK+AIV VD PFK W+ HYGV++ S V + K + EQF +GRLLACISSRPGQCGR DGY+LE EL FY + + + Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-RLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGVEL-----------------------EDPQASEKVAGLVPKT---------LLEQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDK 180
BLAST of EY711178 vs. ExPASy Swiss-Prot
Match: RS8_LEIMA (40S ribosomal protein S8 OS=Leishmania major GN=RPS8 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.950e-42 Identity = 95/218 (43.58%), Postives = 128/218 (58.72%), Query Frame = 3 Query: 114 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI-----GRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEX*ELGFYMKELQR 752 MGI R +H ELGR PANT+L + + V +R RGGN K RALRLDTGN++W SEA+ + R+LDVVYNA++NELVRT+TLVK+ IV VDAAPFK+WY +HYG+D+ S + R+ +R+++ ++ I +Q GR+LA I+SRPGQ GRADG +LE EL FY+K L++ Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARR-VSPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEK 217 The following BLAST results are available for this feature:
BLAST of EY711178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711178 ID=EY711178; Name=EY711178; organism=Citrus sinensis; type=EST; length=947bpback to top |