EY711170

Overview
NameEY711170
Unique NameEY711170
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: AMS1_ARTAN (Amorpha-4,11-diene synthase OS=Artemisia annua GN=AMS1 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.243e-29
Identity = 84/240 (35.00%), Postives = 135/240 (56.25%), Query Frame = 3
Query:   84 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTE-PLDQ---LELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREGQNHLLLELAKVEFNTLQAIYXEE 782
            R  AN+ PSIW   FL  +     ++  ++   +LK +V+  +K+  + P+     L+LID +QRLG+ YHFE E             D NW  +    +SL FRL+R+ GY V+ +VF+ +KD    F   + +D +G+L L+EA+   + GE I+E+A  FT   L  M   + S    +F   + +RAL+ PL  ++P +EA  +I  Y++++  N  LL+LAK+EFN LQ+++ EE
Sbjct:   10 RPIANFPPSIWGDQFL--IYEKQVEQGVEQIVNDLKKEVRQLLKEALDIPMKHANLLKLIDEIQRLGIPYHFEREIDHALQCIYETYGD-NWNGDR---SSLWFRLMRKQGYYVTCDVFNNYKDKNGAFKQSLANDVEGLLELYEATSMRVPGEIILEDALGFTRSRLSIMTKDAFSTNPALFT--EIQRALKQPLWKRLPRIEAAQYIPFYQQQDSHNKTLLKLAKLEFNLLQSLHKEE 241          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD2_ABIGR (Myrcene synthase, chloroplastic OS=Abies grandis GN=ag2 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.063e-28
Identity = 88/272 (32.35%), Postives = 138/272 (50.74%), Query Frame = 3
Query:   78 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV-----------TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWR--KEN------------LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEK------REGQNHLLLELAKVEFNTLQAIYXEE 782
            V RR  +Y  +IWD DF+QSL++ Y + +Y+ RAE L  +VK     +            + + +L ++D+++RLG+A HF+ E             DY +R  +EN            L +T+L FR LR HGY VS EV   F+D    F+C       + + +L+L+ AS  +  GE +MEEA  F++++LKE +     K     ++++ K  +E   H  +P LEAR +I   EK       +     LLELAK+EFN   ++  +E
Sbjct:   62 VQRRIGDYHSNIWDDDFIQSLSTPYGEPSYQERAERLIVEVKKIFNSMYLDDGRLMSSFNDLMQRLWIVDSVERLGIARHFKNEITSAL--------DYVFRYWEENGIGCGRDSIVTDLNSTALGFRTLRLHGYTVSPEVLKAFQDQNGQFVCSPGQTEGEIRSVLNLYRASLIAFPGEKVMEEAEIFSTRYLKEAL----QKIPVSALSQEIKFVMEYGWHTNLPRLEARNYIDTLEKDTSAWLNKNAGKKLLELAKLEFNIFNSLQQKE 321          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.063e-28
Identity = 78/242 (32.23%), Postives = 126/242 (52.07%), Query Frame = 3
Query:   78 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTA-IKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKE---NLYATSLEFRLLRQHGYPVSQEVFSGFKDDK---VGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREGQNHLLLELAKVEFNTLQAIYXEE 782
            V+R  A++  +IW+        S+   ET+K +   LK  VK A +     P++ ++ ID L RLG++YHFE +                  ++   +LY   + F++ RQ G+ +S +VF  FKD+     G +  D  G+LSL+EA+ +   GE I++EA  F+  HL+E+     S      +A + K AL+ P H  +  +E R +I  YE+ E  +  LLE AK++FN LQ ++ EE
Sbjct:    5 VNRPLADFPANIWEDPLTSFSKSDLGTETFKEKHSTLKEAVKEAFMSSKANPIENIKFIDALCRLGVSYHFEKDIVEQLDKSFDCLDFPQMVRQEGCDLYTVGIIFQVFRQFGFKLSADVFEKFKDENGKFKGHLVTDAYGMLSLYEAAQWGTHGEDIIDEALAFSRSHLEEI-----SSRSSPHLAIRIKNALKHPYHKGISRIETRQYISYYEEEESCDPTLLEFAKIDFNLLQILHREE 241          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD3_ABIGR (Pinene synthase, chloroplastic OS=Abies grandis GN=ag3 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.386e-27
Identity = 87/271 (32.10%), Postives = 136/271 (50.18%), Query Frame = 3
Query:   78 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVT-----------EPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKEN------------LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFIC-------DDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVY------EKREGQNHLLLELAKVEFNTLQAIYXEE 782
            V RR  ++  ++WD D +QSL + Y +++Y  RAE+L G+VK     ++           + + +L ++D+L+RLG+  HF+ E              Y++  EN            L +T+L  R LR HGYPVS +VF  FK     F C       ++ +G+L+L  AS  +  GE IM+EA  F++K+LKE +     K     ++ +    LE   H  +P LEAR +I V+       K   ++  LLELAK+EFN  Q++   E
Sbjct:   62 VRRRMGDFHSNLWDDDVIQSLPTAYEEKSYLERAEKLIGEVKNMFNSMSLEDGELMSPLNDLIQRLWIVDSLERLGIHRHFKDEIKSALDYV------YSYWGENGIGCGRESVVTDLNSTALGLRTLRLHGYPVSSDVFKAFKGQNGQFSCSENIQTDEEIRGVLNLFRASLIAFPGEKIMDEAEIFSTKYLKEAL----QKIPVSSLSREIGDVLEYGWHTYLPRLEARNYIQVFGQDTENTKSYVKSKKLLELAKLEFNIFQSLQKRE 322          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSDA_ABIGR (Limonene synthase, chloroplastic OS=Abies grandis GN=ag10 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.195e-26
Identity = 85/273 (31.14%), Postives = 137/273 (50.18%), Query Frame = 3
Query:   78 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV----------TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD-------YNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDF-------KGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKR--EGQNHL-------LLELAKVEFNTLQAIYXEET*DIS 797
            + RR A++ P++W+ DF+QSL+S Y   +Y  RAE +  +VK     +           + L +L ++D+++RLG+  HF+ E            K+        +    +L +T+L  R LR HGY VS +V   FKD+K  F C          + +L+L+ AS  +  GE +MEEA  F++ +LK+++     K     ++ + +  LE   H  +P LEAR +I VYE+   E  N +       LL+LAK+EFN   ++   E   IS
Sbjct:   68 LQRRIADHHPNLWEDDFIQSLSSPYGGSSYSERAETVVEEVKEMFNSIPNNRELFGSQNDLLTRLWMVDSIERLGIDRHFQNEIRVALDYVYSYWKEKEGIGCGRDSTFPDLNSTALALRTLRLHGYNVSSDVLEYFKDEKGHFACPAILTEGQITRSVLNLYRASLVAFPGEKVMEEAEIFSASYLKKVL----QKIPVSNLSGEIEYVLEYGWHTNLPRLEARNYIEVYEQSGYESLNEMPYMNMKKLLQLAKLEFNIFHSLQLRELQSIS 336          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD5_ABIGR (Gamma-humulene synthase OS=Abies grandis GN=ag5 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.386e-26
Identity = 85/273 (31.14%), Postives = 132/273 (48.35%), Query Frame = 3
Query:   90 SANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTA-IKDVTEP--------LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWR---------------KENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDD-------------FKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVY-----EKREGQNHLLLELAKVEFNTLQAIYXEE 782
            ++N   ++W+ D +QSLNS Y    Y+ R+E+L  ++K   + D+ +         + +LE++D ++ LG+  HF+PE             DY +R               K++L AT+L FR LR H Y VS  V   F+DD   F C                + +LSL  AS     GE +MEEA  FT+ +LK+++    +   D  +  + K ALE P H  V   EAR FI ++     E +   +  +LELAK++FN LQ  + +E
Sbjct:   22 TSNRHGNMWEDDRIQSLNSPYGAPAYQERSEKLIEEIKLLFLSDMDDSCNDSDRDLIKRLEIVDTVECLGIDRHFQPEIKLAL--------DYVYRCWNERGIGEGSRDSLKKDLNATALGFRALRLHRYNVSSGVLENFRDDNGQFFCGSTVEEEGAEAYNKHVRCMLSLSRASNILFPGEKVMEEAKAFTTNYLKKVLAGREATHVDESLLGEVKYALEFPWHCSVQRWEARSFIEIFGQIDSELKSNLSKKMLELAKLDFNILQCTHQKE 286          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.386e-26
Identity = 85/272 (31.25%), Postives = 128/272 (47.06%), Query Frame = 3
Query:   75 TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLD-------QLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKE-------------NLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD----------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMI-TSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEK-----REGQNHLLLELAKVEFNTLQAIYXEE 782
            ++ RR+ N+  ++WD D + SLNS Y    Y    ++L  ++K  +    E  D       +L+++D L+ LG+  HFE E              Y W  E             +L AT+L FR LR H Y VS  V   FKD+   F C+            + +LSL  AS  S  GE +MEEA  FT ++L +++    +  + D  +  + K ALE P H  VP  EAR F+ +Y       +   N  +L+LAK++FN LQ  + +E
Sbjct:    8 SIPRRTGNHHGNVWDDDLIHSLNSPYGAPAYYELLQKLIQEIKHLLLTEMEMDDGDHDLIKRLQIVDTLECLGIDRHFEHEIQTAALDYV-----YRWWNEKGIGEGSRDSFSKDLNATALGFRALRLHRYNVSSGVLKNFKDENGKFFCNFTGEEGRGDKQVRSMLSLLRASEISFPGEKVMEEAKAFTREYLNQVLAGHGDVTDVDQSLLREVKYALEFPWHCSVPRWEARSFLEIYGHNHSWLKSNINQKMLKLAKLDFNILQCKHHKE 274          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD8_ABIGR (Beta-phellandrene synthase, chloroplastic OS=Abies grandis GN=ag8 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.423e-25
Identity = 85/286 (29.72%), Postives = 147/286 (51.40%), Query Frame = 3
Query:   39 VQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVK-----------TAIKDVTEPLDQLELIDNLQRLGLAYHFEPE--XXXXXXXXXXXXKDYNWRKENLY----ATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMM----ITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVY--------EKREGQ---NHLLLELAKVEFNTLQAIYXEE 782
            V   ++T   +  + RR  +Y  ++WD DF+QSL++ Y + +Y+ RAE+L G+VK            ++  + + +++L ++D+++RLG+  HF+ E              K     +++++    +T+  FR LR HGY VS EV   F+D    F         D + +L+L+ AS+ +  GE +MEEA  F+S++LKE +    ++S S+E D          LE   H  +P LE R ++ V+        +K+  Q   +  LLELAK+EFN   ++  +E
Sbjct:   47 VSMSLTTAVSDDGLQRRIGDYHSNLWDDDFIQSLSTPYGEPSYRERAEKLIGEVKEMFNSMPSEDGESMSPLNDLIERLWMVDSVERLGIDRHFKKEIKSALDYVYSYWNEKGIGCGRDSVFPDVNSTASGFRTLRLHGYSVSSEVLKVFQDQNGQFAFSPSTKERDIRTVLNLYRASFIAFPGEKVMEEAEIFSSRYLKEAVQKIPVSSLSQEIDY--------TLEYGWHTNMPRLETRNYLDVFGHPTSPWLKKKRTQYLDSEKLLELAKLEFNIFHSLQQKE 324          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSDB_ABIGR (Limonene/alpha-pinene synthase, chloroplastic OS=Abies grandis GN=ag11 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.169e-25
Identity = 84/272 (30.88%), Postives = 135/272 (49.63%), Query Frame = 3
Query:   78 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV----------TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD-------YNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDF-------KGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMM----ITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVY--EKREGQNHL-------LLELAKVEFNTLQAIYXEE 782
            + RR A++ P++W+ DF+QSL+S Y   +Y  RA  +  +VK     +           + L +L ++D+++RLG+  HF+ E            K+        +    +L +T+L  R LR HGY VS +V   FKD K  F C          + +L+L+ AS  +  GE +MEEA  F++ +LKE++    ++S S+E         +  LE   H  +P LEAR +I VY  +  E  N +       LL+LAK+EFN   ++  +E
Sbjct:   68 LQRRIADHHPNLWEDDFIQSLSSPYGGSSYSERAVTVVEEVKEMFNSIPNNRELFGSQNDLLTRLWMVDSIERLGIDRHFQNEIRVALDYVYSYWKEKEGIGCGRDSTFPDLNSTALALRTLRLHGYNVSSDVLEYFKDQKGHFACPAILTEGQITRSVLNLYRASLVAFPGEKVMEEAEIFSASYLKEVLQKIPVSSFSRE--------IEYVLEYGWHTNLPRLEARNYIDVYGQDSYESSNEMPYVNTQKLLKLAKLEFNIFHSLQQKE 331          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD6_ABIGR (Camphene synthase, chloroplastic OS=Abies grandis GN=ag6 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.139e-25
Identity = 90/277 (32.49%), Postives = 141/277 (50.90%), Query Frame = 3
Query:   45 CLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSN-YTDETYKRRAEELKGKVKTAIKDV-------TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXX--KDYNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF-------ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMM--ITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVY---EKREGQNHLLLELAKVEFNTLQAIYXEET*DIS 797
            CL S    + +V RR  NY  ++WD DF+QSL S  Y    Y+ RA+ L G+VK  + +         + L +L L+D+++RLG+  HF+ E              K     +E+    L +T+L  R LR HGY VS +V + FKD    F       I  + +G+L+L  AS  +  GE +M+EA  F++K+L+E +  I ++S      ++ + +  LE   H  +P LEAR ++ V+    K +     LLELAK+EFN   ++   E   +S
Sbjct:   47 CLTSVASTD-SVQRRVGNYHSNLWDDDFIQSLISTPYGAPDYRERADRLIGEVKDIMFNFKSLEDGGNDLLQRLLLVDDVERLGIDRHFKKEIKTALDYVNSYWNEKGIGCGRESVVTDLNSTALGLRTLRLHGYTVSSDVLNVFKDKNGQFSSTANIQIEGEIRGVLNLFRASLVAFPGEKVMDEAETFSTKYLREALQKIPASS-----ILSLEIRDVLEYGWHTNLPRLEARNYMDVFGQHTKNKNAAEKLLELAKLEFNIFHSLQERELKHVS 317          
The following BLAST results are available for this feature:
BLAST of EY711170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
AMS1_ARTAN1.243e-2935.00Amorpha-4,11-diene synthase OS=Artemisia annua GN=... [more]
TPSD2_ABIGR3.063e-2832.35Myrcene synthase, chloroplastic OS=Abies grandis G... [more]
HUMS_ARATH3.063e-2832.23Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
TPSD3_ABIGR3.386e-2732.10Pinene synthase, chloroplastic OS=Abies grandis GN... [more]
TPSDA_ABIGR2.195e-2631.14Limonene synthase, chloroplastic OS=Abies grandis ... [more]
TPSD5_ABIGR6.386e-2631.14Gamma-humulene synthase OS=Abies grandis GN=ag5 PE... [more]
TPSD4_ABIGR6.386e-2631.25Delta-selinene synthase OS=Abies grandis GN=ag4 PE... [more]
TPSD8_ABIGR1.423e-2529.72Beta-phellandrene synthase, chloroplastic OS=Abies... [more]
TPSDB_ABIGR3.169e-2530.88Limonene/alpha-pinene synthase, chloroplastic OS=A... [more]
TPSD6_ABIGR4.139e-2532.49Camphene synthase, chloroplastic OS=Abies grandis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-F06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711170 ID=EY711170; Name=EY711170; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGATCAGAATCATGGCAAAAAATAAGCCAGTCCAATGCCTT
GTCAGCACCAAATATGATAATTTGACAGTTGATAGGAGATCAGCAAACTA
CCAACCTTCAATTTGGGACCATGATTTTTTGCAGTCACTGAATAGCAACT
ATACGGATGAAACATACAAAAGACGAGCAGAAGAGCTGAAGGGAAAAGTG
AAGACAGCGATTAAGGATGTAACCGAGCCTCTGGATCAGTTGGAGCTGAT
TGATAATTTGCAAAGACTTGGATTGGCTTATCATTTTGAGCCTGAGATTC
GGAACATATTGCGTAATATCCACAACCATAATAAAGATTATAATTGGAGA
AAAGAAAATCTGTATGCAACCTCCCTTGAATTCAGACTACTTAGACAACA
TGGCTATCCTGTTTCTCAAGAGGTTTTCAGTGGTTTTAAAGACGACAAGG
TAGGCTTCATTTGTGATGATTTCAAGGGAATACTGAGCTTGCATGAAGCC
TCGTATTACAGCTTAGAAGGAGAAAGCATCATGGAGGAGGCCTGGCAATT
CACCAGTAAGCATCTTAAAGAAATGATGATCACCAGCAACAGCAAGGAAG
AGGATGTATTTGTAGCAGAACAAGCGAAGCGGGCGCTGGAGCTCCCTCTG
CATTGGAAAGTGCCTATGTTAGAGGCAAGGTGGTTCATACACGTTTATGA
GAAAAGAGAGGGACAGAACCACCTTTTACTTGAGCTCGCTAAAGTGGAGT
TTAACACTTTGCAGGCAATTTACCANGAAGAAACTTAAGACATTTCAGGN
NTGGTGGAAGGATACAGGTCTTGGNAGAGAAATGAGCTTTGCGAAGAACA
GGGTGGTAGCGTCCTTCTTATGGAGCATGGGGATCGCGTTTGAGCCTAAA
TCGCCTACTG
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