EY711170

Overview
NameEY711170
Unique NameEY711170
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD9_ABIGR (Terpinolene synthase, chloroplastic OS=Abies grandis GN=ag9 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.020e-23
Identity = 84/279 (30.11%), Postives = 136/279 (48.75%), Query Frame = 3
Query:   66 DNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVK-----------TAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRK------ENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKV--GFIC------DDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMM----ITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREGQNHL------LLELAKVEFNTLQAIYXEET*DIS 797
            D+  V RR   +  ++WD DF+QSL++ Y   +Y+ RA+ L  +VK             I  + + + +L ++DN++RLG+  HF+ E             +            +L +T+L FR+LR HGY VS +V   FK++K    F+C      ++ K +L+L  AS  +  GE +MEEA  F+  +LKE +    ++S S+E         +  LE      +P LE R +I V  + +    L      LLE+AK+EFN   ++   E  D+S
Sbjct:   59 DDHGVQRRIVEFHSNLWDDDFIQSLSTPYGAPSYRERADRLIVEVKGIFTSISAEDGELITPLNDLIQRLLMVDNVERLGIDRHFKNEIKAALDYVYSYWNEKGIGSGSDSGVADLNSTALGFRILRLHGYSVSSDVLEHFKEEKEKGQFVCSAIQTEEEIKSVLNLFRASLIAFPGEKVMEEAEIFSKIYLKEALQNIAVSSLSRE--------IEYVLEDGWQTNMPRLETRNYIDVLGENDRDETLYMNMEKLLEIAKLEFNIFHSLQQRELKDLS 329          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.126e-21
Identity = 72/233 (30.90%), Postives = 111/233 (47.64%), Query Frame = 3
Query:  108 SIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAI-----KDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREGQNHLLLELAKVEFNTLQAIYXEE 782
            S W   FL+   ++   +  +R  E LK KV+  I      D       +  I  L  LGL+YHFE E            +D    +  L+  S  FR+ R +GY +S +VF  FK D   F   + +D KG+LS +EA ++    + I++EA  FT  HL+   + +  +     +++  + AL +P H  +  L AR +I  YE  E  +  LL+LAK+ F  LQ  Y +E
Sbjct:   21 SQWGDQFLKFSIADSDFDVLEREIEVLKPKVRENIFVSSSTDKDAMKKTILSIHFLDSLGLSYHFEKEIEESLKHAFEKIEDLIADENKLHTISTIFRVFRTYGYYMSSDVFKIFKGDDGKFKESLIEDVKGMLSFYEAVHFGTTTDHILDEALSFTLNHLES--LATGRRASPPHISKLIQNALHIPQHRNIQALVAREYISFYEHEEDHDETLLKLAKLNFKFLQLHYFQE 251          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: GBIS2_ARATH ((Z)-gamma-bisabolene synthase 2 OS=Arabidopsis thaliana GN=TPS13 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.079e-21
Identity = 61/182 (33.52%), Postives = 93/182 (51.10%), Query Frame = 3
Query:  246 LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREGQNHLLLELAKVEFNTLQAIYXEE 782
            LI +L  LGLA+HFE E             D    + +L   S+ FR+ R +G+ +   VF  F  D   F   + +D KGILSL+EA++     + I++EA +FTS HLK +++    +     +    +  L LP  W +  + AR +I  YE+ E  + +LL LAK+ F  LQ  Y +E
Sbjct:   69 LIQSLLSLGLAFHFENEIKDILEDAFRRIDDITGDENDLSTISIMFRVFRTYGHNLPSSVFKRFTGDDGKFERSLTEDAKGILSLYEAAHLGTTTDYILDEALEFTSSHLKSLLVGGMCRPH---ILRLIRNTLYLPQRWNMEAVIAREYISFYEQEEDHDKMLLRLAKLNFKLLQLHYIKE 247          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD1_ABIGR (Alpha-bisabolene synthase OS=Abies grandis GN=ag1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.378e-20
Identity = 72/228 (31.58%), Postives = 112/228 (49.12%), Query Frame = 3
Query:  231 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMM---ITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREGQ------------NHLLLELAKVEFNTLQAIYXEET*DISGXVEGYRSWXRN 833
            L++L ++DN+ RLG+  HFE E             +    W + N    L  T+L FRLLR H Y VS  +F  FKD    FIC       D   +L+L+ AS  +  GE+I++EA  F +K+L+E +    TS++      ++++ K AL+   H  VP +EA+ +  VY     +            N   LEL K++FN +Q+I+ EE       ++   SW R+
Sbjct:  299 LERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEE-------MKNVTSWFRD 519          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: GBIS1_ARATH ((Z)-gamma-bisabolene synthase 1 OS=Arabidopsis thaliana GN=TPS12 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.009e-20
Identity = 61/182 (33.52%), Postives = 92/182 (50.55%), Query Frame = 3
Query:  246 LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGF---ICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKREGQNHLLLELAKVEFNTLQAIYXEE 782
            LI  L  LGLA+HFE E             D    +++L   S+ FR+ R +G+ +   VF  F  D   F   + +D KGILSL+EA++     + I++EA +FTS HLK ++     +     +    +  L LP  W +  + AR +I  YE+ E  + +LL LAK+ F  LQ  Y +E
Sbjct:   69 LIQLLLSLGLAFHFENEIKNILEHAFRKIDDITGDEKDLSTISIMFRVFRTYGHNLPSSVFKRFTGDDGKFQQSLTEDAKGILSLYEAAHLGTTTDYILDEALKFTSSHLKSLLAGGTCRPH---ILRLIRNTLYLPQRWNMEAVIAREYISFYEQEEDHDKMLLRLAKLNFKLLQLHYIKE 247          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TASY_TAXBR (Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.901e-18
Identity = 60/208 (28.85%), Postives = 101/208 (48.56%), Query Frame = 3
Query:  231 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKENLY----ATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIHVYEKR------------EGQNHLLLELAKVEFNTLQAIYXEE 782
            L++L L+DN++ LG+  HF+ E             +    W +++L      T+L  R LR HGY VS +V + FKD+   F         + + +++L  AS  +   E  M++A +F   +L+E + T  S    +F  ++ +  +E P H  +P LEAR +I  Y+                 N   LELAK++FN +Q+++ EE
Sbjct:  353 LERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTNTKLF--KEIEYVVEYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEE 558          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TASY_TAXBA (Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.432e-17
Identity = 58/208 (27.88%), Postives = 101/208 (48.56%), Query Frame = 3
Query:  231 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKENLY----ATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFIH------------VYEKREGQNHLLLELAKVEFNTLQAIYXEE 782
            L++L L+DN++ LG+  HF+ E             +    W +++L      T+L  R LR HGY VS +V + FKD+   F         + + +++L  AS  +   E  M++A +F   +L++ + T  S    ++  ++ +  +E P H  +P LEAR +I             +Y      N   LELAK++FN +Q+++ EE
Sbjct:  353 LERLSLVDNIEHLGIGRHFKQEIKVALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRTHGYDVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDEGAMDDARKFAEPYLRDALATKISTNTKLY--KEIEYVVEYPWHMSIPRLEARSYIDSYDDDYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEE 558          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TASY_TAXCH (Taxadiene synthase OS=Taxus chinensis GN=TDC1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.077e-17
Identity = 59/208 (28.37%), Postives = 103/208 (49.52%), Query Frame = 3
Query:  231 LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKENLY----ATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICD------DFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQAKRALELPLHWKVPMLEARWFI------HVYEKR------EGQNHLLLELAKVEFNTLQAIYXEE 782
            L++L L+DN++ LG+  HF+ E             +    W +++L      T+L  R LR HGY VS +V + FKD+   F         + + ++ L  AS  +   E  M++A +F   +L++ + T  S    +F  ++ +  +E P H  +P  EAR +I      +V+E++         N   LELAK++FN +Q+++ EE
Sbjct:  353 LERLSLVDNIEHLGIGRHFKQEIKVALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRTHGYDVSSDVLNNFKDENGRFFSSAGQTHVELRSVVILFRASDLAFPDEGAMDDARKFAEPYLRDALATKISTNTKLF--KEIEYVVEYPWHMSIPRSEARSYIDSYDDDYVWERKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEE 558          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSD1_GINBI (Levopimaradiene synthase, chloroplastic OS=Ginkgo biloba GN=LPS PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.243e-17
Identity = 67/219 (30.59%), Postives = 105/219 (47.95%), Query Frame = 3
Query:  228 PLDQLE---LIDNLQRLGLAYHFEPEXXXXXXXXXXXX---KDYNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKG--------ILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAE---QAKRALELPLHWKVPMLEARWFIH------------VYEKREGQNHLLLELAKVEFNTLQAIYXEET 785
            PLD  E    +D ++RLG+  +F+ E               +   W + N    +  T++  R+LR HGY VS +V   F+D+K  F C  F G         L+L+  S     GE IMEEA  FT+ HL+  +  +N+ ++     +   + + A++ P H  +P LEAR +I             VY+     N   LELAK++FN +QA++ +ET
Sbjct:  352 PLDLFERLWAVDTVERLGIDRYFKKEIKESLDYVYRYWDAERGVGWARCNPIPDVDDTAMGLRILRLHGYNVSSDVLENFRDEKGDFFC--FAGQTQIGVTDNLNLYRCSQVCFPGEKIMEEAKTFTTNHLQNALAKNNAFDKWAVKKDLPGEVEYAIKYPWHRSMPRLEARSYIEQFGSNDVWLGKTVYKMLYVSNEKYLELAKLDFNMVQALHQKET 568          
BLAST of EY711170 vs. ExPASy Swiss-Prot
Match: TPSDV_ABIGR (Abietadiene synthase, chloroplastic OS=Abies grandis GN=ag22 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.689e-16
Identity = 67/221 (30.32%), Postives = 107/221 (48.42%), Query Frame = 3
Query:  228 PLDQLE---LIDNLQRLGLAYHFEPEXXXXXXXXXXXXKD--YNWRKEN----LYATSLEFRLLRQHGYPVSQEVFSGFKDDKVGFICDDFKG--------ILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVF---VAEQAKRALELPLHWKVPMLEARWFIH------------VYEKREGQNHLLLELAKVEFNTLQAIYXEET*DI 794
            PLD  E    +D ++RLG+  HF+ E             +    W +EN    +  T++  R+LR HGY VS +V   F+D+   F C  F G        +L+++  S+ S  GE+IMEEA   T ++L+  +   ++ ++  F   +  + + AL+ P H  +P LEAR +I             VY      N   LELAK++FN +Q+I+  E  D+
Sbjct:  350 PLDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFC--FLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGEVEYALKYPWHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDL 568          
The following BLAST results are available for this feature:
BLAST of EY711170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
TPSD9_ABIGR1.020e-2330.11Terpinolene synthase, chloroplastic OS=Abies grand... [more]
BARS_ARATH2.126e-2130.90Alpha-barbatene synthase OS=Arabidopsis thaliana G... [more]
GBIS2_ARATH8.079e-2133.52(Z)-gamma-bisabolene synthase 2 OS=Arabidopsis tha... [more]
TPSD1_ABIGR1.378e-2031.58Alpha-bisabolene synthase OS=Abies grandis GN=ag1 ... [more]
GBIS1_ARATH4.009e-2033.52(Z)-gamma-bisabolene synthase 1 OS=Arabidopsis tha... [more]
TASY_TAXBR4.901e-1828.85Taxadiene synthase OS=Taxus brevifolia GN=TDC1 PE=... [more]
TASY_TAXBA2.432e-1727.88Taxadiene synthase OS=Taxus baccata GN=TDC1 PE=3 S... [more]
TASY_TAXCH7.077e-1728.37Taxadiene synthase OS=Taxus chinensis GN=TDC1 PE=2... [more]
TPSD1_GINBI9.243e-1730.59Levopimaradiene synthase, chloroplastic OS=Ginkgo ... [more]
TPSDV_ABIGR2.689e-1630.32Abietadiene synthase, chloroplastic OS=Abies grand... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-F06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711170 ID=EY711170; Name=EY711170; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGATCAGAATCATGGCAAAAAATAAGCCAGTCCAATGCCTT
GTCAGCACCAAATATGATAATTTGACAGTTGATAGGAGATCAGCAAACTA
CCAACCTTCAATTTGGGACCATGATTTTTTGCAGTCACTGAATAGCAACT
ATACGGATGAAACATACAAAAGACGAGCAGAAGAGCTGAAGGGAAAAGTG
AAGACAGCGATTAAGGATGTAACCGAGCCTCTGGATCAGTTGGAGCTGAT
TGATAATTTGCAAAGACTTGGATTGGCTTATCATTTTGAGCCTGAGATTC
GGAACATATTGCGTAATATCCACAACCATAATAAAGATTATAATTGGAGA
AAAGAAAATCTGTATGCAACCTCCCTTGAATTCAGACTACTTAGACAACA
TGGCTATCCTGTTTCTCAAGAGGTTTTCAGTGGTTTTAAAGACGACAAGG
TAGGCTTCATTTGTGATGATTTCAAGGGAATACTGAGCTTGCATGAAGCC
TCGTATTACAGCTTAGAAGGAGAAAGCATCATGGAGGAGGCCTGGCAATT
CACCAGTAAGCATCTTAAAGAAATGATGATCACCAGCAACAGCAAGGAAG
AGGATGTATTTGTAGCAGAACAAGCGAAGCGGGCGCTGGAGCTCCCTCTG
CATTGGAAAGTGCCTATGTTAGAGGCAAGGTGGTTCATACACGTTTATGA
GAAAAGAGAGGGACAGAACCACCTTTTACTTGAGCTCGCTAAAGTGGAGT
TTAACACTTTGCAGGCAATTTACCANGAAGAAACTTAAGACATTTCAGGN
NTGGTGGAAGGATACAGGTCTTGGNAGAGAAATGAGCTTTGCGAAGAACA
GGGTGGTAGCGTCCTTCTTATGGAGCATGGGGATCGCGTTTGAGCCTAAA
TCGCCTACTG
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