EY711167 | Citrus Genome Database

Overview


Name	EY711167
Unique Name	EY711167
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	849

Libraries


Library Name	Type
Sweet orange fruit, development stadium (3 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_HUMAN (Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_HORSE (Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_CANFA (Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY711167 vs. ExPASy Swiss-Prot

BLAST of EY711167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95


Match Name	E-value	Identity	Description
UBIQ_HUMAN	2.568e-34	96.05	Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1	[more]
UBIQ_HORSE	2.568e-34	96.05	Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2	[more]
UBIQ_GORGO	2.568e-34	96.05	Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 S...	[more]
UBIQ_FELCA	2.568e-34	96.05	Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1	[more]
UBIQ_DROME	2.568e-34	96.05	Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1...	[more]
UBIQ_CRIGR	2.568e-34	96.05	Ubiquitin OS=Cricetulus griseus PE=3 SV=1	[more]
UBIQ_CHICK	2.568e-34	96.05	Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1	[more]
UBIQ_CERCA	2.568e-34	96.05	Ubiquitin OS=Ceratitis capitata PE=1 SV=1	[more]
UBIQ_CAVPO	2.568e-34	96.05	Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1	[more]
UBIQ_CANFA	2.568e-34	96.05	Ubiquitin OS=Canis familiaris GN=UBA52 PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-702-004-F03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY711167 ID=EY711167; Name=EY711167; organism=Citrus sinensis; type=EST; length=849bp
CAAGACAAGGAGGGAATCCCCCCGGACCAGCAGAGGCTTATCTTCGCTGG
AAAGCAGCTCGAGGACGGCCGCACCTTGGCCGATTATAACATACAGAAGG
AGTCAACCCTCCATCTTGTCCTTCGTCTCCGCGGAGGCATGCAGATCTTT
GTCAAAACCCTAACCGGGAAGACGATAACCCTCGAGGTTGAGAGCTCAGA
CACGATCGATAACGTCAAGGCCAAGATTCAAGACAAGGAGGGAATCCCCC
CGGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGC
ACCTTGGCTGATTACAATATCCAGAAGGAGTCAACCCTTCATCTCGTCCT
CAGGCTCCGTGGTGGTATGCAGATCTTCGTCAAAACCCTAACTGGGAAGA
CGATCACTCTGGAGGTGGAGAGTTCGGATACGATTGATAACGTCAAGGCC
AAGATCCAGGACAAAGAGGGGATCCCGCCGGACCAGCAAAGATTGATCTT
CGCCGGTAAGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACACATTCA
GAAAGAGCAACTCTCCACCTTGTTCTTCGTCTCAGGGGAGGCATGCAGAT
ATTTGTTAANGACCCTTACTGGGAAAACAATTTACTTTGAAAGTGAGAGC
TCAGACACGATTTTGACATGTCAGGGCAAAATCCNNAGATAGGAAAGGAT
TCCACNGNATCAGCAGCGTTTGATCTTCGCTGGCAACAGCTTGAGGATGG
AAAGACTCTTGCGGGATAATACATCCAGAAGGAGTCGACCCTTCATCTGG
NTCTGCGCCTGAGGGTGGTATGCAAATATTTGTCAGACCTGACTGGAAG