EY711167 | Citrus Genome Database

Overview


Name	EY711167
Unique Name	EY711167
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	849

Libraries


Library Name	Type
Sweet orange fruit, development stadium (3 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 8.041e-28
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 8.041e-28
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.354e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 116.316 bits (290), Expect = 1.047e-27
Identity = 56/66 (84.85%), Postives = 63/66 (95.45%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 1.047e-27
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.380e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 116.701 bits (291), Expect = 1.363e-27
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 25.7942 bits (55), Expect = 1.363e-27
Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLR+RGG
Sbjct:   63 KESTLHLVLRMRGG 76

HSP 4 Score: 93.5893 bits (231), Expect = 1.512e-18
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.721e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 115.546 bits (288), Expect = 1.775e-27
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 1.775e-27
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.471e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 115.161 bits (287), Expect = 2.311e-27
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADY  +K ++
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 2.311e-27
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 93.9745 bits (232), Expect = 1.158e-18
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.471e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 115.161 bits (287), Expect = 2.311e-27
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 2.311e-27
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.471e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 115.161 bits (287), Expect = 2.311e-27
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 2.311e-27
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.471e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 115.161 bits (287), Expect = 2.311e-27
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 2.311e-27
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.174e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 113.62 bits (283), Expect = 6.640e-27
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 1

Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNS 564
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY  +K ++
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

HSP 3 Score: 26.5646 bits (57), Expect = 6.640e-27
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 2

Query:  551 ERATLHLVLRLRGG 592
            + +TLHLVLRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

HSP 4 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 138
            QDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   31 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY711167 vs. ExPASy Swiss-Prot

BLAST of EY711167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95


Match Name	E-value	Identity	Description
UBIQ_CAMDR	2.568e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	2.568e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	3.354e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	4.380e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	5.721e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	7.471e-34	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	7.471e-34	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	7.471e-34	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	7.471e-34	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	2.174e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-702-004-F03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY711167 ID=EY711167; Name=EY711167; organism=Citrus sinensis; type=EST; length=849bp
CAAGACAAGGAGGGAATCCCCCCGGACCAGCAGAGGCTTATCTTCGCTGG
AAAGCAGCTCGAGGACGGCCGCACCTTGGCCGATTATAACATACAGAAGG
AGTCAACCCTCCATCTTGTCCTTCGTCTCCGCGGAGGCATGCAGATCTTT
GTCAAAACCCTAACCGGGAAGACGATAACCCTCGAGGTTGAGAGCTCAGA
CACGATCGATAACGTCAAGGCCAAGATTCAAGACAAGGAGGGAATCCCCC
CGGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGC
ACCTTGGCTGATTACAATATCCAGAAGGAGTCAACCCTTCATCTCGTCCT
CAGGCTCCGTGGTGGTATGCAGATCTTCGTCAAAACCCTAACTGGGAAGA
CGATCACTCTGGAGGTGGAGAGTTCGGATACGATTGATAACGTCAAGGCC
AAGATCCAGGACAAAGAGGGGATCCCGCCGGACCAGCAAAGATTGATCTT
CGCCGGTAAGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACACATTCA
GAAAGAGCAACTCTCCACCTTGTTCTTCGTCTCAGGGGAGGCATGCAGAT
ATTTGTTAANGACCCTTACTGGGAAAACAATTTACTTTGAAAGTGAGAGC
TCAGACACGATTTTGACATGTCAGGGCAAAATCCNNAGATAGGAAAGGAT
TCCACNGNATCAGCAGCGTTTGATCTTCGCTGGCAACAGCTTGAGGATGG
AAAGACTCTTGCGGGATAATACATCCAGAAGGAGTCGACCCTTCATCTGG
NTCTGCGCCTGAGGGTGGTATGCAAATATTTGTCAGACCTGACTGGAAG