EY711167

Overview
NameEY711167
Unique NameEY711167
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.354e-17
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 1
Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            M I VKTLTGK I L+++ +D +  +K ++++KEGIPP QQRLI+AGKQ+ D +    Y+++  S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76          

HSP 2 Score: 69.3218 bits (168), Expect = 2.128e-12
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 1
Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 543
            M I VKTLTGK I L+++ +D +  +K ++++KEGIPP QQRLI+AGKQ+ D +    Y
Sbjct:    1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESY 59          

HSP 3 Score: 21.9422 bits (45), Expect = 2.128e-12
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  557 ATLHLVLRLRGG 592
            + LHLVL LRGG
Sbjct:   65 SVLHLVLALRGG 76          
BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.565e-15
Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 1
Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            M + VKTLTGK I++E++ SD + ++K  +++KEGIPP QQRLIF GKQ++D  T+ D ++ +   LHLVL LRGG
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76          

HSP 2 Score: 68.1662 bits (165), Expect = 4.666e-12
Identity = 31/58 (53.45%), Postives = 45/58 (77.59%), Query Frame = 1
Query:  367 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 540
            M + VKTLTGK I++E++ SD + ++K  +++KEGIPP QQRLIF GKQ++D  T+ D
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTD 58          

HSP 3 Score: 21.9422 bits (45), Expect = 4.666e-12
Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  551 ERATLHLVLRLRGG 592
            E   LHLVL LRGG
Sbjct:   63 EGMQLHLVLTLRGG 76          
BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 1
Query:  145 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSN 561
            + V++     +T +    D++  +K  ++ K  +P   Q L+   K L+  R+L+ Y I KE T+HL L++       + +F+       K   L+V  S ++  VKA I+ K GI P+ Q +   GK+LEDG+ +ADY  RK N
Sbjct:   10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGN 154          

HSP 2 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 45/128 (35.16%), Postives = 68/128 (53.12%), Query Frame = 1
Query:    1 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            + K  +P   Q L+   K L+  R+L+ Y I KE T+HL L++       + +F+       K   L+V  S ++  VKA I+ K GI P+ Q +   GK+LEDG+ +ADY I+K + L L     GG
Sbjct:   38 RSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165          
BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4)

HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12
Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = 1
Query:  151 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKSNSPPCS 576
            VK L G    + V +S T+  +K +I  K G+P  QQRL      L+DG TL+   +   ST+ LV++     + I V+   G +   EV  + T+D +K K+  +E +  DQ  L F G+ +ED   L +Y  +    P C+
Sbjct:    7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLK----PQCT 145          

HSP 2 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 1
Query:    7 KEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            K G+P  QQRL      L+DG TL+   +   ST+ LV++     + I V+   G +   EV  + T+D +K K+  +E +  DQ  L F G+ +ED   L +Y ++ + T+   LRLRGG
Sbjct:   35 KIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155          
BLAST of EY711167 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 1
Query:  139 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 366
            M++F++TLTG    L V   +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L DYNI +  TL LVL +RGG
Sbjct:   28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103          
The following BLAST results are available for this feature:
BLAST of EY711167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
UBL1_SCHPO6.354e-1752.63Ubiquitin-like protein 1 OS=Schizosaccharomyces po... [more]
RUB1_YEAST1.565e-1552.63NEDD8-like protein RUB1 OS=Saccharomyces cerevisia... [more]
UBD_HUMAN6.576e-1431.72Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2[more]
UCRP_MOUSE4.712e-1232.17Ubiquitin cross-reactive protein OS=Mus musculus G... [more]
ANUB1_HUMAN6.805e-1147.37AN1-type zinc finger and ubiquitin domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-F03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711167 ID=EY711167; Name=EY711167; organism=Citrus sinensis; type=EST; length=849bp
CAAGACAAGGAGGGAATCCCCCCGGACCAGCAGAGGCTTATCTTCGCTGG
AAAGCAGCTCGAGGACGGCCGCACCTTGGCCGATTATAACATACAGAAGG
AGTCAACCCTCCATCTTGTCCTTCGTCTCCGCGGAGGCATGCAGATCTTT
GTCAAAACCCTAACCGGGAAGACGATAACCCTCGAGGTTGAGAGCTCAGA
CACGATCGATAACGTCAAGGCCAAGATTCAAGACAAGGAGGGAATCCCCC
CGGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGC
ACCTTGGCTGATTACAATATCCAGAAGGAGTCAACCCTTCATCTCGTCCT
CAGGCTCCGTGGTGGTATGCAGATCTTCGTCAAAACCCTAACTGGGAAGA
CGATCACTCTGGAGGTGGAGAGTTCGGATACGATTGATAACGTCAAGGCC
AAGATCCAGGACAAAGAGGGGATCCCGCCGGACCAGCAAAGATTGATCTT
CGCCGGTAAGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACACATTCA
GAAAGAGCAACTCTCCACCTTGTTCTTCGTCTCAGGGGAGGCATGCAGAT
ATTTGTTAANGACCCTTACTGGGAAAACAATTTACTTTGAAAGTGAGAGC
TCAGACACGATTTTGACATGTCAGGGCAAAATCCNNAGATAGGAAAGGAT
TCCACNGNATCAGCAGCGTTTGATCTTCGCTGGCAACAGCTTGAGGATGG
AAAGACTCTTGCGGGATAATACATCCAGAAGGAGTCGACCCTTCATCTGG
NTCTGCGCCTGAGGGTGGTATGCAAATATTTGTCAGACCTGACTGGAAG
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