EY711162

Overview
NameEY711162
Unique NameEY711162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACFN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ispG PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.605e-51
Identity = 104/164 (63.41%), Postives = 122/164 (74.39%), Query Frame = 2
Query:   95 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 586
            F+QLEYTD+EY  ELQ I + F P +  CK+   AVRIG NHGSLSDRIMS YGD+P GMVES  EF RIC    F + + S+KASN VVMV+  RLLV+ M   G  +PLHLGVTEAG+GEDGR+KSA+GIG LL DGLGDTIRVSL+E PE EI   R+L +
Sbjct:  122 FKQLEYTDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRIKSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACTN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides thetaiotaomicron GN=ispG PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.444e-51
Identity = 103/169 (60.95%), Postives = 124/169 (73.37%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 586
            D    F++LEYTD+EY +E+Q I + F P +  CK+   A+RIG NHGSLSDRIMS YGD+P GMVES  EF RIC    F + + S+KASN VVMV+  RLLVA M   G  +PLHLGVTEAG+GEDGR+KSA+GIG LL DGLGDTIRVSL+E PE EI   R+L +
Sbjct:  117 DAARTFKKLEYTDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRIKSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD 285          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLFF (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila felis (strain Fe/C-56) GN=ispG PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.689e-50
Identity = 103/192 (53.65%), Postives = 125/192 (65.10%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYF 655
            D+R  F    YTD  Y   L  +EE FSPLVEKCK+ G+A+RIG NHGSLS+RIM  YGD+  GMV SA E+ ++C  L + + +FSMK+SNP VMV AYR L  ++   GW YPLHLGVTEAG G DG +KSA+GIGTLL +GLGDTIR SLT  P +EI  C  L         L K   PF  ++   F
Sbjct:  121 DKRNMFSGKTYTDKNYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERIMQRYGDTIEGMVVSALEYIKVCENLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMDGIIKSAVGIGTLLTEGLGDTIRCSLTGCPTEEIPVCESLLKHTTIYLNLPKQENPFALENSESF 312          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLCV (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila caviae GN=ispG PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.880e-50
Identity = 102/192 (53.12%), Postives = 125/192 (65.10%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYF 655
            D+R  F    YTD  Y   L  +EE F+PLVEKCK+ G+A+RIG NHGSLS+R+M  YGD+  GMV SA E+  +C KL + + +FSMK+SNP VMV AYR L  ++   GW YPLHLGVTEAG G DG +KSA+GIGTLL +GLGDTIR SLT  P  EI  C  L        +L K   PF  ++   F
Sbjct:  121 DKRNMFTGKTYTDKNYADSLLRLEEKFTPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVSALEYIEVCEKLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGIGLDGIIKSAVGIGTLLTEGLGDTIRCSLTGCPTTEIPVCESLLKHTTTYLDLPKKENPFALENSETF 312          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlorobium tepidum GN=ispG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.913e-50
Identity = 99/159 (62.26%), Postives = 124/159 (77.99%), Query Frame = 2
Query:   89 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            A+F   +YTDDEY+ EL  + E F+PLV K +  G ++RIGTNHGSLSDRI+S YG+SP GMVE+A EF+RIC    +++ LFSMK+SN  VM+QAYRLLVA       + YPLHLGVTEAG+G++GR+KSA+GIG LL+DGLGDTIRVSLTE P  E+
Sbjct:  186 AKFSSKDYTDDEYRAELDKVREEFTPLVRKARSLGVSMRIGTNHGSLSDRIVSRYGNSPEGMVEAALEFSRICEDEGYYDQLFSMKSSNVRVMIQAYRLLVARADAELRYAYPLHLGVTEAGDGDEGRIKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 344          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLAB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila abortus GN=ispG PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.381e-50
Identity = 101/192 (52.60%), Postives = 125/192 (65.10%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYF 655
            D+R  F    YTD  Y   L  +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M  YGD+  GMV SA E+  +C KL + + +FSMK+SNP VMV AYR L  ++   GW YPLHLGVTEAG G DG +KS++GIGTLL +GLGDTIR SLT  P +EI  C  L         L +   PF  ++   F
Sbjct:  121 DKRNMFTGKIYTDKHYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVSALEYIEVCEKLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMDGIIKSSVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESLLKHTTTYLNLPRKNNPFALENSESF 312          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLPN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia pneumoniae GN=ispG PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.185e-49
Identity = 101/193 (52.33%), Postives = 129/193 (66.84%), Query Frame = 2
Query:   80 DRRAQFEQLE-YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGVAPFEEKHRHYF 655
            D+R  F+  + YT+  Y + L  +EE F+PLVEKCK+ G+A+RIG NHGSLS+RIM  YGD+  GMV SA E+  +C KL++ + +FSMK+SNP +MV AYR L  ++   GW YPLHLGVTEAG G DG +KSA+GIGTLL +GLGDTIR SLT  P  EI  C  L        +L +   PF  +H   F
Sbjct:  121 DKRNMFKGTKIYTEASYAQSLLRLEEKFAPLVEKCKRLGKAMRIGVNHGSLSERIMQKYGDTIEGMVASAIEYIAVCEKLNYRDVVFSMKSSNPKIMVTAYRQLAKDLDARGWLYPLHLGVTEAGMGVDGIIKSAVGIGTLLAEGLGDTIRCSLTGCPTTEIPVCDSLLRHTKIYLDLPEKKNPFSLQHSENF 313          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis GN=ispG PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.521e-48
Identity = 93/164 (56.71%), Postives = 117/164 (71.34%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 571
            D+R  F    Y+D++Y   L+H+   FSPLVEKCK+ G+A+RIG NHGSLS+R+   YG++  GMV SA E+A +C  +D+H+ +FSMK+SNP VMV AYR L  E+    W YPLHLGVTEAG G  G +KSA+GIGTLL +GLGDTIR SLT  P  EI  C
Sbjct:  120 DKRNMFTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMVYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSGTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=ispG PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.521e-48
Identity = 93/164 (56.71%), Postives = 117/164 (71.34%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 571
            D+R  F    Y+D++Y   L+H+   FSPLVEKCK+ G+A+RIG NHGSLS+R+   YG++  GMV SA E+A +C  +D+H+ +FSMK+SNP VMV AYR L  E+    W YPLHLGVTEAG G  G +KSA+GIGTLL +GLGDTIR SLT  P  EI  C
Sbjct:  120 DKRNMFTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMVYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSGTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=ispG PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.521e-48
Identity = 93/164 (56.71%), Postives = 117/164 (71.34%), Query Frame = 2
Query:   80 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 571
            D+R  F    Y+D++Y   L+H+   FSPLVEKCK+ G+A+RIG NHGSLS+R+   YG++  GMV SA E+A +C  +D+H+ +FSMK+SNP VMV AYR L  E+    W YPLHLGVTEAG G  G +KSA+GIGTLL +GLGDTIR SLT  P  EI  C
Sbjct:  120 DKRNMFTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGMVYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGSGTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283          
The following BLAST results are available for this feature:
BLAST of EY711162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 435
Match NameE-valueIdentityDescription
ISPG_BACFN2.605e-5163.414-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACTN4.444e-5160.954-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLFF1.689e-5053.654-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLCV2.880e-5053.134-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLTE4.913e-5062.264-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLAB8.381e-5052.604-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLPN3.185e-4952.334-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLTR3.521e-4856.714-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLTB3.521e-4856.714-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLTA3.521e-4856.714-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-E10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711162 ID=EY711162; Name=EY711162; organism=Citrus sinensis; type=EST; length=921bp
CACTAGTCCCCTCTTTCCTATTCCGGACTTATTTCTCGACCCCGCGTCCG
CGGACGCGTGTGGCGGACGCGTGGGTGCTGATAGACGGGCTCAGTTTGAG
CAGCTAGAGTACACAGACGATGAGTATCAGAAAGAACTTCAGCATATTGA
GGAGGTTTTTAGTCCATTGGTTGAGAAATGTAAAAAGTACGGAAGGGCAG
TGCGTATTGGGACTAACCATGGGAGCCTTTCAGATCGTATCATGAGCTAC
TATGGGGATTCTCCTAGGGGAATGGTTGAATCTGCCTTTGAGTTTGCAAG
AATCTGCCGGAAATTGGACTTCCATAATTTTCTCTTTTCAATGAAAGCAA
GCAACCCAGTCGTAATGGTCCAAGCATACCGTCTGCTTGTAGCTGAAATG
TACGTTCATGGCTGGGATTACCCATTACATTTGGGAGTGACTGAAGCTGG
AGAAGGTGAAGATGGTCGGATGAAATCTGCTATTGGAATTGGTACCCTTC
TTCAGGATGGTTTGGGTGATACAATCAGGGTTTCGCTTACAGAACCACCA
GAAAAGGAGATTGACCCTTGCAGAAGGTTGGCCAACCTGGGTATGAGAGC
AGCTGAGCTTCAGAAAGGAGTGGCACCATTTGAGGAAAAGCACAGACATT
ATTTTGATTTTCAGCGTCGTTCTGGTCAACTGCCAATTCAAAAGGAGGGT
GAGGAGGAGGATTACAGAGGTGCTCTGCACCGTGATGGCTCAGTTCTCAT
GTCCGTTTCTCTGGATCAGTTGAAGGCTCCGGAATTACTGTACAAGTCAC
TTGCAGCAAAGCTAGTCGTTGGCATGCCGTTNCAGGATCTAGCAACAGTC
GATTCAATCTTGTTAGGAGAGCTTCCNTCAGNTGATGATCATGATGCTCG
TCTAGCTCTGAAACGGGTTGT
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