EY711162

Overview
NameEY711162
Unique NameEY711162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACC0 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus cereus (strain AH820) GN=ispG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.687e-23
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 580
            +V   K+ G  +RIG N GSL   I+  YG  +  GMVESA    +I   LDFH+ + SMKAS+  + ++AY     E     +DYPLHLG+TE+G    G +KSA G+G +L  G+G+T+R+SL+  P +E+   R L
Sbjct:  119 VVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACAN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus anthracis GN=ispG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.687e-23
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 580
            +V   K+ G  +RIG N GSL   I+  YG  +  GMVESA    +I   LDFH+ + SMKAS+  + ++AY     E     +DYPLHLG+TE+G    G +KSA G+G +L  G+G+T+R+SL+  P +E+   R L
Sbjct:  116 VVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 249          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACAH (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=ispG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.687e-23
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 580
            +V   K+ G  +RIG N GSL   I+  YG  +  GMVESA    +I   LDFH+ + SMKAS+  + ++AY     E     +DYPLHLG+TE+G    G +KSA G+G +L  G+G+T+R+SL+  P +E+   R L
Sbjct:  119 VVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACAC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ispG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.687e-23
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 580
            +V   K+ G  +RIG N GSL   I+  YG  +  GMVESA    +I   LDFH+ + SMKAS+  + ++AY     E     +DYPLHLG+TE+G    G +KSA G+G +L  G+G+T+R+SL+  P +E+   R L
Sbjct:  119 VVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BACAA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacillus anthracis (strain A0248) GN=ispG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.687e-23
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 580
            +V   K+ G  +RIG N GSL   I+  YG  +  GMVESA    +I   LDFH+ + SMKAS+  + ++AY     E     +DYPLHLG+TE+G    G +KSA G+G +L  G+G+T+R+SL+  P +E+   R L
Sbjct:  119 VVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ALCBS (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=ispG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.687e-23
Identity = 60/139 (43.17%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  149 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            E+    +++  K  G  +RIG N GSL   +   YG+ +   +VESA   A I  + DF NF  S+KASN  + +QAYR L +++     + PLHLGVTEAG    G +KSA+ +G LL +G+GDTIRVSL   P +E+
Sbjct:  115 EDRIKAVIQCAKDKGLPIRIGVNAGSLEKELQRKYGEPTSDALVESALRHADILDRYDFQNFKVSVKASNVFMTLQAYRKLSSQL-----EQPLHLGVTEAGTFRSGTVKSAVALGALLMEGIGDTIRVSLAADPVEEV 248          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_PROST (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Providencia stuartii GN=ispG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.733e-23
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  149 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            EE    +V+  + +   +RIG N GSL   I   YG+ +P  +VESA     I  +L+F  F  S+KAS+  + V +YRLL  ++     D PLHLG+TEAG    G +KSAIG+G LL +G+GDT+R+SL   P +E+
Sbjct:  115 EERIRQVVDSARHHNIPIRIGVNGGSLEKDIQEKYGEPTPEALVESAMRHVDILDRLNFDQFKVSVKASDVFLAVGSYRLLAQKI-----DQPLHLGITEAGGARSGSVKSAIGLGMLLAEGIGDTLRISLAADPVEEV 248          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CELJU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=ispG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.733e-23
Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 2
Query:  149 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            E+    +V+K +     +RIG N GSL   +   YG+ +P  +VESA     I   L+F+NF  S+KAS+  + V AYR L A +     + PLHLG+TEAG    G +KSAIG+G LL DG+GDTIRVSL   P +EI
Sbjct:  115 EKRIKAVVDKARDLNIPIRIGVNAGSLEKDLQKKYGEPTPDALVESALRHVEILDGLNFYNFKVSVKASDIFMAVAAYRKLAALI-----EQPLHLGITEAGGLRAGTVKSAIGLGALLMDGIGDTIRVSLAADPVEEI 248          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_SULSY (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=ispG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.141e-22
Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = 2
Query:  167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            ++++CKK   AVR+G N GSL +R++  YG  S   + ESA  ++     + F NF  S+K S+ +  ++A ++   +      D PLH+G+TEAG    G +KSA+GIG LL +G+GDT+RVSLT  PE+EI
Sbjct:  116 ILQECKKKNIAVRLGVNSGSLEERLLEKYGYPSAEALAESALYWSEFFESVGFTNFKVSIKGSDVLQNIKANKIFAEKT-----DIPLHIGITEAGPAGRGSIKSAVGIGILLYEGIGDTVRVSLTADPEEEI 243          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_IDILO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Idiomarina loihiensis GN=ispG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.141e-22
Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 2
Query:  149 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            E+    +V+  ++    +RIG N GSL   +   YG+ +   +VESA     I  KLDF++F  S+KAS+  + V++YRLL  ++     D PLHLG+TEAG    G +KS++G+G LL +G+GDT+RVSL   P +EI
Sbjct:  115 EDRIKAVVDAARERNIPIRIGVNGGSLEKDLQEKYGEPTAEALVESAMRHVNILYKLDFYDFKVSVKASDVFLAVESYRLLAQKI-----DQPLHLGITEAGGKRSGAVKSSVGLGMLLAEGIGDTLRVSLAADPVEEI 248          
The following BLAST results are available for this feature:
BLAST of EY711162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 435
Match NameE-valueIdentityDescription
ISPG_BACC06.687e-2342.454-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACAN6.687e-2342.454-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACAH6.687e-2342.454-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACAC6.687e-2342.454-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_BACAA6.687e-2342.454-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_ALCBS6.687e-2343.174-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PROST8.733e-2342.454-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CELJU8.733e-2345.324-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SULSY1.141e-2242.114-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_IDILO1.141e-2241.734-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-E10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711162 ID=EY711162; Name=EY711162; organism=Citrus sinensis; type=EST; length=921bp
CACTAGTCCCCTCTTTCCTATTCCGGACTTATTTCTCGACCCCGCGTCCG
CGGACGCGTGTGGCGGACGCGTGGGTGCTGATAGACGGGCTCAGTTTGAG
CAGCTAGAGTACACAGACGATGAGTATCAGAAAGAACTTCAGCATATTGA
GGAGGTTTTTAGTCCATTGGTTGAGAAATGTAAAAAGTACGGAAGGGCAG
TGCGTATTGGGACTAACCATGGGAGCCTTTCAGATCGTATCATGAGCTAC
TATGGGGATTCTCCTAGGGGAATGGTTGAATCTGCCTTTGAGTTTGCAAG
AATCTGCCGGAAATTGGACTTCCATAATTTTCTCTTTTCAATGAAAGCAA
GCAACCCAGTCGTAATGGTCCAAGCATACCGTCTGCTTGTAGCTGAAATG
TACGTTCATGGCTGGGATTACCCATTACATTTGGGAGTGACTGAAGCTGG
AGAAGGTGAAGATGGTCGGATGAAATCTGCTATTGGAATTGGTACCCTTC
TTCAGGATGGTTTGGGTGATACAATCAGGGTTTCGCTTACAGAACCACCA
GAAAAGGAGATTGACCCTTGCAGAAGGTTGGCCAACCTGGGTATGAGAGC
AGCTGAGCTTCAGAAAGGAGTGGCACCATTTGAGGAAAAGCACAGACATT
ATTTTGATTTTCAGCGTCGTTCTGGTCAACTGCCAATTCAAAAGGAGGGT
GAGGAGGAGGATTACAGAGGTGCTCTGCACCGTGATGGCTCAGTTCTCAT
GTCCGTTTCTCTGGATCAGTTGAAGGCTCCGGAATTACTGTACAAGTCAC
TTGCAGCAAAGCTAGTCGTTGGCATGCCGTTNCAGGATCTAGCAACAGTC
GATTCAATCTTGTTAGGAGAGCTTCCNTCAGNTGATGATCATGATGCTCG
TCTAGCTCTGAAACGGGTTGT
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