EY711162

Overview
NameEY711162
Unique NameEY711162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_FRASN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Frankia sp. (strain EAN1pec) GN=ispG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.844e-27
Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 2
Query:  137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 613
            ++  ++    +    K  G  +RIG N GSL  R++  YG + P  +VESA   A +  + DF +   S+K ++PV+M+QAYRLL         DYPLHLGVTEAG    G +KSA+  G LL +G+GDTIRVSL+ PP +EI      L +LG+R  +L+
Sbjct:  121 IKQFDDKVGEIARAAKAAGTPIRIGVNAGSLDKRLLEKYGKATPEALVESALWEASLFEEHDFRDIKISVKHNDPVIMIQAYRLLA-----QACDYPLHLGVTEAGPAFQGTVKSAVAFGALLSEGIGDTIRVSLSAPPIEEIKVASAILESLGLRERKLE 276          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ACIC1 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=ispG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.844e-27
Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = 2
Query:  137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAEL 610
            ++  ++    + +  K +G  +RIG N GSL  RI+  YG  +   +VESA   A +  + DFH+   S+K  +P+VMVQAYRLL A+      DYPLHLGVTEAG    G +KSA+  G LL +G+GDTIRVSL+ PP +E+      L +LG+R  +L
Sbjct:  123 IKKFDDKVKEIAQAAKDHGTPIRIGVNAGSLDPRILQKYGKPTAEALVESALWEASLFEEHDFHDIKISVKHHDPMVMVQAYRLLAAQT-----DYPLHLGVTEAGPLLQGTIKSAVAFGILLSEGIGDTIRVSLSAPPVEEVKVGIGILESLGLRPRKL 277          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG1_STRAW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1 OS=Streptomyces avermitilis GN=ispG1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.700e-26
Identity = 64/143 (44.76%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            ++  ++    + +  K++G  +RIG N GSL  R++  YG + P  +VESA   A +  + DF +   S+K ++PVVMV AYR L A+      DYPLHLGVTEAG    G +KSA+  G LL +G+GDTIRVSL+ PP +EI
Sbjct:  121 IKQFDDKVKEIAKAAKEHGTPIRIGVNAGSLDRRLLEKYGKATPEALVESALWEASLFEEHDFRDIKISVKHNDPVVMVNAYRQLAAQC-----DYPLHLGVTEAGPAFQGTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEI 258          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_RENSM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=ispG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.462e-26
Identity = 68/161 (42.24%), Postives = 97/161 (60.25%), Query Frame = 2
Query:  137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 613
            ++  ++    + +  K +G ++RIG N GSL  R+M  YG + P  +VESA   A +  + DFH+F  S+K ++PVVMV+AY LL          +PLHLGVTEAG    G +KSA   G LL  G+GDTIRVSL+ PP +EI    + L +L +R  +L+
Sbjct:  122 IRKFDDQIKEIAQAAKDHGTSIRIGVNAGSLDPRLMEKYGKATPEALVESAVWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLAER-----GAWPLHLGVTEAGPAFQGTIKSATAFGALLSKGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLE 277          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG2_STRCO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2 OS=Streptomyces coelicolor GN=ispG2 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.102e-25
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 2
Query:  137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            ++  ++    + +  K +G  +RIG N GSL  R++  YG + P  + ESA   A +  + DF +   S+K ++PVVMV+AYR L A+      DYPLHLGVTEAG    G +KSA+  G LL  G+GDTIRVSL+ PP +EI
Sbjct:  121 IKQFDDKVKEIAKAAKDHGTPIRIGVNAGSLDRRLLQKYGRATPEALAESALWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQC-----DYPLHLGVTEAGPAFQGTIKSAVAFGALLSQGIGDTIRVSLSAPPVEEI 258          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG1_STRCO (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1 OS=Streptomyces coelicolor GN=ispG1 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.102e-25
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 2
Query:  137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            ++  ++    + +  K +G  +RIG N GSL  R++  YG + P  + ESA   A +  + DF +   S+K ++PVVMV+AYR L A+      DYPLHLGVTEAG    G +KSA+  G LL  G+GDTIRVSL+ PP +EI
Sbjct:  122 IKQFDDKVKEIAKAAKDHGTPIRIGVNAGSLDRRLLQKYGRATPEALAESALWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQC-----DYPLHLGVTEAGPAFQGTIKSAVAFGALLSQGIGDTIRVSLSTPPVEEI 259          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CLAMS (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=ispG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.440e-25
Identity = 66/161 (40.99%), Postives = 98/161 (60.87%), Query Frame = 2
Query:  137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 613
            ++  ++    + +  K  G ++RIG N GSL   ++  YG + P  +VESA   A +  + DFH+F  S+K ++PV+MV+AYRLL         D+PLHLGVTEAG    G +KSA   G LL +G+GDTIRVSL+ PP +E+    + L +L +R  +L+
Sbjct:  121 IRKFDDQVGAIAKAAKAAGTSIRIGVNAGSLHPSLLQKYGKATPEALVESAVWEASLFEEHDFHDFKISVKHNDPVIMVKAYRLLAER-----GDWPLHLGVTEAGPAFQGTIKSATAFGILLSEGIGDTIRVSLSAPPAEEVKVGLQILQSLNLRERKLE 276          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CLAM3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=ispG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.455e-25
Identity = 66/161 (40.99%), Postives = 98/161 (60.87%), Query Frame = 2
Query:  137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 613
            ++  ++    + +  K  G ++RIG N GSL   ++  YG + P  +VESA   A +  + DFH+F  S+K ++PV+MV+AYRLL         D+PLHLGVTEAG    G +KSA   G LL +G+GDTIRVSL+ PP +E+    + L +L +R  +L+
Sbjct:  121 IRKFDDQVGAIAKAAKAAGVSIRIGVNAGSLHPSLLQKYGKATPEALVESAVWEASLFEEHDFHDFKISVKHNDPVIMVKAYRLLAER-----GDWPLHLGVTEAGPAFQGTIKSATAFGILLSEGIGDTIRVSLSAPPAEEVKVGLQILQSLNLRERKLE 276          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ACIF5 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=ispG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.455e-25
Identity = 66/133 (49.62%), Postives = 85/133 (63.91%), Query Frame = 2
Query:  167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            +VE  K  G  +RIG N GSL   I   YG+ +P  +VESA     I  +L+FH+   S+KAS+  + V AYRLL  ++     DYPLHLG+TEAG    G +KSAIG+G LL+DG+GDTIRVSL   P +EI
Sbjct:  121 VVEMAKDKGIPIRIGVNAGSLEKDIQEKYGEPTPEALVESALRHVSILDELNFHDVKISVKASDIFLAVSAYRLLSEKV-----DYPLHLGITEAGGLRSGTVKSAIGLGLLLRDGIGDTIRVSLAADPVEEI 248          
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ACIF2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=ispG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.455e-25
Identity = 66/133 (49.62%), Postives = 85/133 (63.91%), Query Frame = 2
Query:  167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562
            +VE  K  G  +RIG N GSL   I   YG+ +P  +VESA     I  +L+FH+   S+KAS+  + V AYRLL  ++     DYPLHLG+TEAG    G +KSAIG+G LL+DG+GDTIRVSL   P +EI
Sbjct:  121 VVEMAKDKGIPIRIGVNAGSLEKDIQEKYGEPTPEALVESALRHVSILDELNFHDVKISVKASDIFLAVSAYRLLSEKV-----DYPLHLGITEAGGLRSGTVKSAIGLGLLLRDGIGDTIRVSLAADPVEEI 248          
The following BLAST results are available for this feature:
BLAST of EY711162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 435
Match NameE-valueIdentityDescription
ISPG_FRASN5.844e-2742.244-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_ACIC15.844e-2743.754-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG1_STRAW1.700e-2644.764-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_RENSM6.462e-2642.244-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG2_STRCO1.102e-2544.064-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG1_STRCO1.102e-2544.064-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CLAMS1.440e-2540.994-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CLAM32.455e-2540.994-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_ACIF52.455e-2549.624-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_ACIF22.455e-2549.624-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-E10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711162 ID=EY711162; Name=EY711162; organism=Citrus sinensis; type=EST; length=921bp
CACTAGTCCCCTCTTTCCTATTCCGGACTTATTTCTCGACCCCGCGTCCG
CGGACGCGTGTGGCGGACGCGTGGGTGCTGATAGACGGGCTCAGTTTGAG
CAGCTAGAGTACACAGACGATGAGTATCAGAAAGAACTTCAGCATATTGA
GGAGGTTTTTAGTCCATTGGTTGAGAAATGTAAAAAGTACGGAAGGGCAG
TGCGTATTGGGACTAACCATGGGAGCCTTTCAGATCGTATCATGAGCTAC
TATGGGGATTCTCCTAGGGGAATGGTTGAATCTGCCTTTGAGTTTGCAAG
AATCTGCCGGAAATTGGACTTCCATAATTTTCTCTTTTCAATGAAAGCAA
GCAACCCAGTCGTAATGGTCCAAGCATACCGTCTGCTTGTAGCTGAAATG
TACGTTCATGGCTGGGATTACCCATTACATTTGGGAGTGACTGAAGCTGG
AGAAGGTGAAGATGGTCGGATGAAATCTGCTATTGGAATTGGTACCCTTC
TTCAGGATGGTTTGGGTGATACAATCAGGGTTTCGCTTACAGAACCACCA
GAAAAGGAGATTGACCCTTGCAGAAGGTTGGCCAACCTGGGTATGAGAGC
AGCTGAGCTTCAGAAAGGAGTGGCACCATTTGAGGAAAAGCACAGACATT
ATTTTGATTTTCAGCGTCGTTCTGGTCAACTGCCAATTCAAAAGGAGGGT
GAGGAGGAGGATTACAGAGGTGCTCTGCACCGTGATGGCTCAGTTCTCAT
GTCCGTTTCTCTGGATCAGTTGAAGGCTCCGGAATTACTGTACAAGTCAC
TTGCAGCAAAGCTAGTCGTTGGCATGCCGTTNCAGGATCTAGCAACAGTC
GATTCAATCTTGTTAGGAGAGCTTCCNTCAGNTGATGATCATGATGCTCG
TCTAGCTCTGAAACGGGTTGT
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