EY711162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_GRABC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ispG PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24 Identity = 63/133 (47.37%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562 +V+ + +G A+RIG N GSL ++ YG+ +P +VESA E A+I + DFH F S+KAS+ + V AY+ L AE+ D+PLH+G+TEAG G +KSAIG+G LL G+GDT+RVSL+ PE+E+ Sbjct: 123 VVKAARDHGCAIRIGVNAGSLERHLLEKYGEPNPDALVESALEHAKILQDHDFHEFKISVKASDVFLAVAAYQQL-AEVC----DHPLHIGITEAGGRRTGTVKSAIGLGNLLWAGVGDTMRVSLSAEPEEEV 250
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_GEOTN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=ispG PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24 Identity = 61/144 (42.36%), Postives = 89/144 (61.81%), Query Frame = 2 Query: 152 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 580 E +V+ K+ G +RIG N GSL RI+ YG + GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TEAG G +KSA+G+G +L G+G+TIR+SL+ P +E+ R + Sbjct: 114 EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTAEGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITEAGTLFSGTIKSAVGLGAILSKGIGNTIRISLSADPVEEVKVAREI 252
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_BREBN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ispG PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.592e-24 Identity = 59/139 (42.45%), Postives = 89/139 (64.03%), Query Frame = 2 Query: 167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 580 +VE C++ +RIG N GS+ R++ YG SP +VESA + +I L++ N + S+K+S+ M+Q Y L+ + +YPLH+GVTEAG G +KS++GIGT+L G+GDTIRVSLT P +EI +++ Sbjct: 116 VVEACRERNVPIRIGVNSGSVEKRLLDKYGYPSPEAIVESAMDHVQILEDLNYDNIVISLKSSDVPTMIQTYSLMAQKR-----NYPLHVGVTEAGTQFSGSIKSSVGIGTVLSMGIGDTIRVSLTADPVEEIKVAKQI 249
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_HELPY (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Helicobacter pylori GN=ispG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.079e-24 Identity = 64/153 (41.83%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 149 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE 607 +E +V+ CK+ +RIG N GSL + YG +P+GMVESA A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +KSA+ +G LL +G+GDT+RVS+T E EI R + R E Sbjct: 110 KEKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALYNAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSIKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKE 257
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_GEOKA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Geobacillus kaustophilus GN=ispG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.079e-24 Identity = 62/144 (43.06%), Postives = 89/144 (61.81%), Query Frame = 2 Query: 152 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 580 E +V+ K+ G +RIG N GSL RI+ YG + GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TEAG G +KSA+G+G +L G+G+TIRVSL+ P +E+ R + Sbjct: 114 EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTADGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITEAGTLFSGTIKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVAREI 252
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CAUCR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Caulobacter crescentus GN=ispG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.079e-24 Identity = 64/133 (48.12%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562 +++ + +G ++RIG N GSL ++ YG+ P MVESA ARI + DFH F S+KAS+P + V AY L + D PLHLGVTEAG G +KSAIGIG +L G+GDTIRVSL P +EI Sbjct: 128 VIQAARDHGCSMRIGVNAGSLERELLEKYGEPCPDAMVESALNHARILQDHDFHEFKISVKASDPFMTVAAYYQLAEAI-----DCPLHLGVTEAGATRTGTVKSAIGIGAMLWAGIGDTIRVSLAADPVEEI 255
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_GLUOX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Gluconobacter oxydans GN=ispG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24 Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = 2 Query: 167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562 +V + YG ++RIG N GSL ++ YG+ +P +VESA E A+I DFH F S+KAS+ + V AY+ L D+PLH+G+TEAG G +KS+IG+G LL G+GDT+RVSL+ PE+E+ Sbjct: 124 VVNAARDYGCSIRIGVNAGSLEKHLLEKYGEPNPEALVESALEHAKILEDHDFHEFKISVKASDVFMAVAAYQQLA-----DCCDHPLHIGITEAGSKRAGTVKSSIGLGNLLWAGVGDTMRVSLSAAPEEEV 251
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_GLUDA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=ispG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24 Identity = 61/133 (45.86%), Postives = 91/133 (68.42%), Query Frame = 2 Query: 167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562 +V+ +++G ++RIG N GSL ++ YG+ +P +VESA E A+I + DFH F S+KAS+ + V AY+ L AE+ D+PLH+G+TEAG G +KS+IG+G LL G+GDT+RVSL+ PE+E+ Sbjct: 124 VVKAAREHGCSIRIGVNAGSLEKHLLEKYGEPNPDALVESALEHAKILQDHDFHEFKISVKASDVFLAVAAYQQL-AEVC----DHPLHIGITEAGSKRAGTVKSSIGLGNLLWAGVGDTMRVSLSADPEEEV 251
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CLOTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Clostridium tetani GN=ispG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24 Identity = 69/160 (43.12%), Postives = 99/160 (61.88%), Query Frame = 2 Query: 149 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAEL-QKGV 622 EE + + +K K+ G +RIG N GSL I++ YG +VESA I K+DFH+ + S+K+SN M+++Y+ + +++ +YPLHLGVTEAG G +KS++GIGTLL G+GDTIRVSLT P +EI + + +RA L KGV Sbjct: 109 EEKVNLVSKKAKEKGIPIRIGVNSGSLEKDILNKYGGVCSDALVESALRHVEILNKVDFHDIVISIKSSNVNQMIESYKKISSKV-----NYPLHLGVTEAGTPWRGIIKSSVGIGTLLSQGIGDTIRVSLTGDPIEEIKAGKEI----LRALNLYSKGV 259
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ARTS2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Arthrobacter sp. (strain FB24) GN=ispG PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.715e-24 Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 2 Query: 137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 613 ++ ++ + K +G ++RIG N GSL I+ YG + P +VESA A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G +KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ Sbjct: 122 IRKFDDQVKEIARAAKDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESAVWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQGTIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLE 277 The following BLAST results are available for this feature:
BLAST of EY711162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 435
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711162 ID=EY711162; Name=EY711162; organism=Citrus sinensis; type=EST; length=921bpback to top |