EY711162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_NOCFA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nocardia farcinica GN=ispG PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.546e-24 Identity = 69/162 (42.59%), Postives = 98/162 (60.49%), Query Frame = 2 Query: 143 HIEEVFSPLVEKCKKYGRA---VRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 613 +I+E + E K G A +RIG N GSL R++ YG + P +VESA A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG G +KSA+ G LL +G+GDTIRVSL+ PP +E+ + L +L +R +L+ Sbjct: 122 NIKEFDGRVKEVAKAAGAAGIPIRIGVNAGSLDKRMLEKYGKATPEALVESALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQC-----DYPLHLGVTEAGPAFQGTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEVKVGTQILQSLNLRPRKLE 278
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ARTAT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Arthrobacter aurescens (strain TC1) GN=ispG PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.546e-24 Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 2 Query: 137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 613 ++ ++ + + +G ++RIG N GSL IM YG + P +VESA A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G +KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ Sbjct: 122 IRKFDDQVKEIAAAARDHGTSIRIGVNAGSLEPGIMKKYGKATPEALVESAVWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQGTIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLE 277
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_THEFY (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Thermobifida fusca (strain YX) GN=ispG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.048e-24 Identity = 63/161 (39.13%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP-RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 613 ++ ++ + + + G +RIG N GSL R+++ YG + +VESA + + FH+ S+K +PVVM++AYR+L DYPLHLGVTEAG G +KSA+ G LL +G+GDTIRVSL+ PP +E+ + L +LG+R L+ Sbjct: 121 IKKFDDKVGEIAKAASEAGIPIRIGVNAGSLDKRLLAKYGKATAEALVESALWECSLFEEHGFHDIKISVKHHDPVVMIRAYRMLAERC-----DYPLHLGVTEAGPAFQGTIKSAVAFGALLAEGIGDTIRVSLSAPPAEEVKVGIQILESLGLRQRGLE 276
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_NITSB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=ispG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.048e-24 Identity = 75/183 (40.98%), Postives = 97/183 (53.01%), Query Frame = 2 Query: 149 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRA----------------AELQKGVAPFEEKHRH 649 +E +V+ CK+ +RIG N GSL I + YG + MV+SA ++ LDF + SMKAS+ V+AYR L + YP HLGVTEAG +KSAIGIG LL +G+GDTIRVS+T EKEI+ R + RA A+L K VA EEK +H Sbjct: 108 KERIKEVVKACKERNIPIRIGVNAGSLEKEIEAKYGATSEAMVQSALYHIKLLEDLDFTDIKVSMKASDVERTVEAYRKLRPLV-----PYPFHLGVTEAGTVFHATIKSAIGIGALLLEGIGDTIRVSITGELEKEIEVGRAIIKDAGRASEGLNIISCPTCGRIEADLVKAVAEVEEKTKH 285
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ERWCT (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Erwinia carotovora subsp. atroseptica GN=ispG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.048e-24 Identity = 61/139 (43.88%), Postives = 85/139 (61.15%), Query Frame = 2 Query: 149 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562 EE +V+ + Y +RIG N GSL I YG+ +P ++ESA I +L+F F S+KAS+ + VQ+YRLL A + D PLHLG+TEAG G +KSAIG+G LL +G+GDT+R+SL P +E+ Sbjct: 115 EERIRSVVDCARYYNIPIRIGVNGGSLEKDIQEKYGEPTPEALLESAMRHVDILDRLNFDQFKVSVKASDVFLAVQSYRLLAARI-----DQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRISLAADPVEEV 248
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ACICJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Acidiphilium cryptum (strain JF-5) GN=ispG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.048e-24 Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 562 +V + +G ++RIG N GSL ++ YG+ +P +VESA E A+I + DFH F S+KAS+ + V AY+ L AE+ D+PLH+G+TEAG G +KS+IG+G+LL G+GDT+RVSL+ PE+E+ Sbjct: 123 VVAAARDHGCSIRIGVNAGSLEKHLLEKYGEPNPDALVESALEHAKILQDHDFHEFKISVKASDVFMAVAAYQQL-AEVC----DHPLHIGITEAGGRRTGTVKSSIGLGSLLWAGIGDTMRVSLSAEPEEEV 250
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_LEIXX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leifsonia xyli subsp. xyli GN=ispG PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 7.899e-24 Identity = 64/161 (39.75%), Postives = 97/161 (60.25%), Query Frame = 2 Query: 137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 613 ++ ++ + + K ++RIG N GSL R++ YG + +VESA A + + DFH+F S+K ++P+VMV+AYR+L D+PLHLGVTEAG G +KSA G LL +G+GDTIRVSL+ PP +E+ + L +L +R +L+ Sbjct: 114 IRKFDDQVGEIARRAKAADVSLRIGVNAGSLDRRLLEKYGKPTAEALVESAVWEASLFEEHDFHDFKISVKHNDPIVMVKAYRMLAER-----GDWPLHLGVTEAGPAFQGTIKSATAFGILLGEGIGDTIRVSLSAPPAEEVKVGLQILQSLNLRERKLE 269
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_HELPG (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Helicobacter pylori (strain G27) GN=ispG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.899e-24 Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 2 Query: 167 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE 607 +V+ CK+ +RIG N GSL + YG +P+GMVESA A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +KSA+ +G LL +G+GDT+RVS+T E EI R + R E Sbjct: 116 VVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALYNAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSIKSAMALGGLLMEGIGDTMRVSITGELENEIKVARAILRHSGRLKE 257
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_CALS8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=ispG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.899e-24 Identity = 61/158 (38.61%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 152 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY-GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQKGV 622 E +V++ K+YG +R+G N GSL I+ Y +P +VE+A R+ DF N + S+K+S+ + +++Y +L YPLH+G+TEAG G +KS+I IG LL G+GDTIRVSLT+ PEKE+ + + ++ +L+KGV Sbjct: 106 EKVKKIVDEAKRYGIPIRVGANSGSLPKEILEKYKSPTPEAIVEAALNQVRLLESFDFDNIVISVKSSDILTTIKSYEILSRRT-----SYPLHVGLTEAGTFIAGCVKSSIAIGHLLLQGIGDTIRVSLTDDPEKEVTVAKEI----LKGLKLKKGV 254
BLAST of EY711162 vs. ExPASy Swiss-Prot
Match: ISPG_ARTCA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=ispG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.899e-24 Identity = 65/161 (40.37%), Postives = 94/161 (58.39%), Query Frame = 2 Query: 137 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 613 ++ ++ + + +G ++RIG N GSL I+ YG + P +VESA A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G +KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ Sbjct: 122 IRKFDDQVKEIAAAARDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESAVWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQGTIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLE 277 The following BLAST results are available for this feature:
BLAST of EY711162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 435
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711162 ID=EY711162; Name=EY711162; organism=Citrus sinensis; type=EST; length=921bpback to top |