EY711153

Overview
NameEY711153
Unique NameEY711153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_PSEFL (Dihydrolipoyl dehydrogenase OS=Pseudomonas fluorescens GN=lpd PE=1 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 1.595e-53
Identity = 111/206 (53.88%), Postives = 142/206 (68.93%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEK------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEI 823
            AAI+AAQLGLKT CIEK      + ALGGTCLNVGCIPSKALL SS+ YHEA  +F  HG++   V +D+PAM+A+K   V NLT GI  LFK N VT  +G+GK ++  +V V  ++G   V++ +N+IIA+GS    +P   + +  IV STGAL    VPKKL VIGAG IGLE+GSVW RLG+EVTV+E     +P+ D +I
Sbjct:   19 AAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALLDSSYKYHEAKEAFKVHGIEAKGVTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLSDDIIVDSTGALEFQAVPKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQI 224          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEAE (Dihydrolipoamide dehydrogenase OS=Pseudomonas aeruginosa GN=lpdG PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.084e-53
Identity = 111/206 (53.88%), Postives = 142/206 (68.93%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEK------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEI 823
            AAI+AAQLGLKT CIEK      + ALGGTCLNVGCIPSKALL SS+ YHEA  +F  HG++   V +D+PAM+A+K   V NLT GI  LFK N VT  +G+GK ++  +V V  ++G   V++ +N+IIA+GS    +P   + +  IV STGAL    VPKKL VIGAG IGLE+GSVW RLG+EVTV+E     +P+ D +I
Sbjct:   19 AAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALLDSSYKYHEAKEAFKVHGIEAKGVTIDVPAMVARKANIVKNLTGGIATLFKANGVTSFEGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVDSTGALEFQAVPKKLGVIGAGVIGLELGSVWARLGAEVTVLEALDKFLPAADEQI 224          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_AZOVI (Dihydrolipoyl dehydrogenase OS=Azotobacter vinelandii PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.754e-52
Identity = 106/206 (51.46%), Postives = 140/206 (67.96%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEK------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEI 823
            AAIK+AQLGLKT  IEK      + ALGGTCLNVGCIPSKALL SS+ +HEA  SF  HG+    V +D+P M+A+KD+ V NLT G+  L K N VT  +G+GK ++  +V V   +G + V+  +N+I+A+GS    +P   +D+  IV STGAL    VP KL VIGAG IGLE+GSVW RLG+EVTV+E     +P++D ++
Sbjct:   19 AAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAVDEQV 224          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEPU (Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4)

HSP 1 Score: 197.978 bits (502), Expect = 6.274e-50
Identity = 109/211 (51.66%), Postives = 139/211 (65.88%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEK------RGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVE------FAADIVPSMDGE 820
            AAIKAAQLGLKT CIEK      + ALGGTCLNVGCIPSKALL SS  Y EA  SF  HG+    V++D+ AM+ +K   V NLT G+  LFK N VT ++G+GK ++  +V V   +G   V++ +N+I+A+GS    +P   +D+  IV STGAL    VPK+L VIGAG IGLE+GSVW RLG+EVTV+E       AAD   S + +
Sbjct:   19 AAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKALLDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQGHGKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAVPKRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQ 229          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_RALEH (Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=odhL PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 7.178e-46
Identity = 99/195 (50.77%), Postives = 121/195 (62.05%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKR--------GALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVE 784
            AAI+A QLGL   C E            LGGTCLNVGCIPSKALL SS  +    H    HG+    V+VD+  M+ +KD  V  +T+GIE LF+KNKVT +KGYGKF+  S      ++    VV  K +IIATGS  + LP I +D   +  + GAL    VPKKL VIGAG IGLE+GSVW RLGS+VTV+E
Sbjct:   19 AAIRAGQLGLNVACCEGNPYDDPKGEARLGGTCLNVGCIPSKALLASSEEFENVQHHLGDHGITVGDVKVDVAKMLKRKDDIVGKMTKGIEFLFRKNKVTLLKGYGKFVGKSAEGFQ-VDVAGEVVTAKQVIIATGSKARHLPGIKVDNDLVSDNEGALKFPAVPKKLGVIGAGVIGLELGSVWRRLGSDVTVLE 212          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_VIBPA (Dihydrolipoyl dehydrogenase OS=Vibrio parahaemolyticus GN=lpd PE=3 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 3.016e-44
Identity = 98/211 (46.45%), Postives = 132/211 (62.56%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAK 856
            AA + A LGL+T  +E+   LGG CLNVGCIPSKALLH S +  EA  + A HGV F   + D+  +   K+K V+ LT G+ G+ K   VT V GYGKF  P+ + V+  EG +TVV   N I+A GS    LP I  ++ RI  ST AL L EVP+KL+++G G IGLEMG+V+  LGS+V VVE    ++P+ D +I   ++  +K K
Sbjct:   21 AAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVSKVIEEAK-AMADHGVVFGEPQTDINKIRIWKEKVVNQLTGGLSGMAKMRNVTVVNGYGKFTGPNSILVEG-EGESTVVNFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLIMGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRIKDK 229          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_VIBCH (Dihydrolipoyl dehydrogenase OS=Vibrio cholerae GN=lpd PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.161e-42
Identity = 94/213 (44.13%), Postives = 128/213 (60.09%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAKMN 862
            AA + A LGL T  IE+   LGG CLNVGCIPSKALLH + +  EA  +   HG+ F   + D+  +   K+K ++ LT G+ G+ K  KV  V GYGKF  P+ + VD  E G TVV   N I+A GS    LP I  ++ RI  ST AL L EVP KL+++G G IGLEM +V+  LGS++ VVE    ++P+ D ++   ++  +K K N
Sbjct:   21 AAFRCADLGLDTVIIERYNTLGGVCLNVGCIPSKALLHVAKVIEEAK-ALTEHGIVFGEPKTDIDKVRLWKEKVINQLTGGLAGMAKMRKVNVVNGYGKFTGPNTIEVDG-EEGKTVVTFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLIMGGGIIGLEMATVYHSLGSKIDVVEMFDQLIPAADKDMVKVYTKRIKDKFN 231          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_SHIFL (Dihydrolipoyl dehydrogenase OS=Shigella flexneri GN=lpdA PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 6.288e-42
Identity = 93/213 (43.66%), Postives = 129/213 (60.56%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAKMN 862
            AA + A LGL+T  +E+   LGG CLNVGCIPSKALLH + +  EA  + A HG+ F   + D+  +   K+K ++ LT G+ G+ K  KV  V G GKF   + + V+  E G TV+   N IIA GS    LP I  ++ RI  ST AL L EVP++L+V+G G IGLEMG+V+  LGS++ VVE    ++P+ D +I   F+  +  K N
Sbjct:   21 AAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAK-ALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEG-ENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFN 231          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_ECOLI (Dihydrolipoyl dehydrogenase OS=Escherichia coli (strain K12) GN=lpdA PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 6.288e-42
Identity = 93/213 (43.66%), Postives = 129/213 (60.56%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAKMN 862
            AA + A LGL+T  +E+   LGG CLNVGCIPSKALLH + +  EA  + A HG+ F   + D+  +   K+K ++ LT G+ G+ K  KV  V G GKF   + + V+  E G TV+   N IIA GS    LP I  ++ RI  ST AL L EVP++L+V+G G IGLEMG+V+  LGS++ VVE    ++P+ D +I   F+  +  K N
Sbjct:   21 AAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAK-ALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEG-ENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFN 231          
BLAST of EY711153 vs. ExPASy Swiss-Prot
Match: DLDH_ECOL6 (Dihydrolipoyl dehydrogenase OS=Escherichia coli O6 GN=lpdA PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 6.288e-42
Identity = 93/213 (43.66%), Postives = 129/213 (60.56%), Query Frame = 2
Query:  224 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPXITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPSMDGEIRSNFSVHLKAKMN 862
            AA + A LGL+T  +E+   LGG CLNVGCIPSKALLH + +  EA  + A HG+ F   + D+  +   K+K ++ LT G+ G+ K  KV  V G GKF   + + V+  E G TV+   N IIA GS    LP I  ++ RI  ST AL L EVP++L+V+G G IGLEMG+V+  LGS++ VVE    ++P+ D +I   F+  +  K N
Sbjct:   21 AAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAK-ALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEG-ENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFN 231          
The following BLAST results are available for this feature:
BLAST of EY711153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
DLDH_PSEFL1.595e-5353.88Dihydrolipoyl dehydrogenase OS=Pseudomonas fluores... [more]
DLDH2_PSEAE2.084e-5353.88Dihydrolipoamide dehydrogenase OS=Pseudomonas aeru... [more]
DLDH_AZOVI8.754e-5251.46Dihydrolipoyl dehydrogenase OS=Azotobacter vinelan... [more]
DLDH2_PSEPU6.274e-5051.66Dihydrolipoamide dehydrogenase OS=Pseudomonas puti... [more]
DLDH_RALEH7.178e-4650.77Dihydrolipoyl dehydrogenase OS=Ralstonia eutropha ... [more]
DLDH_VIBPA3.016e-4446.45Dihydrolipoyl dehydrogenase OS=Vibrio parahaemolyt... [more]
DLDH_VIBCH2.161e-4244.13Dihydrolipoyl dehydrogenase OS=Vibrio cholerae GN=... [more]
DLDH_SHIFL6.288e-4243.66Dihydrolipoyl dehydrogenase OS=Shigella flexneri G... [more]
DLDH_ECOLI6.288e-4243.66Dihydrolipoyl dehydrogenase OS=Escherichia coli (s... [more]
DLDH_ECOL66.288e-4243.66Dihydrolipoyl dehydrogenase OS=Escherichia coli O6... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-004-D09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711153 ID=EY711153; Name=EY711153; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGACCAATTCAATCGCTTGATTGGAGAAAAAGTTGATTGAA
AAATGGCGATGGCAAGTCTTGCAAGAATAAAGCCGTACGTGCTGTCAAGG
AATCTCTCGAACTCGTTGAATGGTAATGTTTTCAAGTACAGTTTCTCGCT
TACAAGGGGCTTCGCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCG
GAGGTGGACCTGGTGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGT
CTCAAGACTACGTGCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCT
TAACGTCGGATGCATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGT
ACCATGAAGCCATGCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCT
GTTGAAGTTGATTTGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTC
TAATCTTACAAGAGGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCT
ATGTGAAAGGATATGGCAAGTTTATCTCCCCATCTGAGGTCTCTGTGGAC
ACCATTGAAGGTGGAAACACTGTCGTGAAAGGCAAGAATATCATAATTGC
TACTGGTTCTGACGTTAAGTCTCTACCTGNGATCACCATTGATGAAAAGA
GAATTGTGTCATCCACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAA
CTCGTGGTCATTGGGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTG
GGGCAGGCTTGGTTCAGAGGTCACTGTTGTTGAATTTGCAGCTGATATCG
TCCCAAGCATGGATGGGGAAATTCGCAGCAATTTCAGCGTTCACTTGAAA
GCAAAAATGAATTCATGCTCAAACTAAGGTGGTGGGAGTGATTATCTGNT
GAT
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