EY711115

Overview
NameEY711115
Unique NameEY711115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: TPSDB_ABIGR (Limonene/alpha-pinene synthase, chloroplastic OS=Abies grandis GN=ag11 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.284e-14
Identity = 49/143 (34.27%), Postives = 74/143 (51.75%), Query Frame = 3
Query:  198 RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDL-----DPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHN------------KNTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSF 575
            RR AD+ P +W  D+IQSL S Y G SY+ +   + E+V  M        +L     D L +L ++D++ RLG+  HF++EI+  LD +++             +T   L +TAL  R LR +GYN    +    F D+KG F
Sbjct:   70 RRIADHHPNLWEDDFIQSLSSPYGGSSYSERAVTVVEEVKEMFNSIPNNRELFGSQNDLLTRLWMVDSIERLGIDRHFQNEIRVALDYVYSYWKEKEGIGCGRDSTFPDLNSTALALRTLRLHGYNVS-SDVLEYFKDQKGHF 211          
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: TPSD8_ABIGR (Beta-phellandrene synthase, chloroplastic OS=Abies grandis GN=ag8 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.284e-14
Identity = 63/217 (29.03%), Postives = 97/217 (44.70%), Query Frame = 3
Query:  162 TTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKL----KEQVSAMLQQDNKVVD--LDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNKSL-----------YATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECK-GMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTL 758
            TT++   D  + RR  DY   +W  D+IQSL + Y   SY  + EKL    KE  ++M  +D + +    D + +L ++D++ RLG+  HF+ EIK  LD +++    K +            +TA  FR LR +GY+    E    F D+ G F  S  + E                     +  +A  F++ YLKE V K  +     E   TL
Sbjct:   52 TTAVS--DDGLQRRIGDYHSNLWDDDFIQSLSTPYGEPSYRERAEKLIGEVKEMFNSMPSEDGESMSPLNDLIERLWMVDSVERLGIDRHFKKEIKSALDYVYSYWNEKGIGCGRDSVFPDVNSTASGFRTLRLHGYSVS-SEVLKVFQDQNGQFAFSPSTKERDIRTVLNLYRASFIAFPGEKVMEEAEIFSSRYLKEAVQKIPVSSLSQEIDYTL 265          
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 62/228 (27.19%), Postives = 100/228 (43.86%), Query Frame = 3
Query:  183 DQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDP--LHQLDLIDNLHRLGVSYHFEDEIK-RTLDRIH------------NKNTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKG-----MXXXXXXXXXXXXXXSSIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHAFELHYIGGCEDW 806
            + +I RR+ ++   +W  D I SL+S Y   +Y   L+KL +++  +L  + ++ D D   + +L ++D L  LG+  HFE EI+   LD ++              + +K L ATAL FR LR + YN         F DE G F  +   +E +G                      +  +A  FT  YL + +A H    + D+ L   VK+A E  +      W
Sbjct:    6 ESSIPRRTGNHHGNVWDDDLIHSLNSPYGAPAYYELLQKLIQEIKHLLLTEMEMDDGDHDLIKRLQIVDTLECLGIDRHFEHEIQTAALDYVYRWWNEKGIGEGSRDSFSKDLNATALGFRALRLHRYNVS-SGVLKNFKDENGKFFCNFTGEEGRGDKQVRSMLSLLRASEISFPGEKVMEEAKAFTREYLNQVLAGHGDVTDVDQSLLREVKYALEFPWHCSVPRW 232          
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.615e-13
Identity = 56/175 (32.00%), Postives = 82/175 (46.86%), Query Frame = 3
Query:  195 IRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNK------SLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLK 701
            +R  A + PT+W   +     +  + ESY  ++  LK++V  +L         D +  + LID L RLGVSYHFE++I+  L +I N   +        LY  A+ FR+ RQ+G+     + FS+F D  G FK S   D  KGM                I  +A  FT  YL+
Sbjct:   63 VRPLAYFPPTVWGNRFASLTFNPSEFESYDERVIVLKKKVKDILISSTS----DSVETVILIDLLCRLGVSYHFENDIEELLSKIFNSQPDLVDEKECDLYTAAIVFRVFRQHGFKMS-SDVFSKFKDSDGKFKESLRGD-AKGM-LSLFEASHLSVHGEDILEEAFAFTKDYLQ 230          
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: TPSD2_ABIGR (Myrcene synthase, chloroplastic OS=Abies grandis GN=ag2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 61/207 (29.47%), Postives = 94/207 (45.41%), Query Frame = 3
Query:  150 MAASTTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKL----KEQVSAMLQQDNKVVDL--DPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIH-----------NKNTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECK-GMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLKEWVAK 716
            M+ S  +  P D  + RR  DY   IW  D+IQSL + Y   SY  + E+L    K+  ++M   D +++    D + +L ++D++ RLG++ HF++EI   LD +              +    L +TAL FR LR +GY T   E    F D+ G F  S    E +                   +  +A  F+T YLKE + K
Sbjct:   49 MSISLATAAP-DDGVQRRIGDYHSNIWDDDFIQSLSTPYGEPSYQERAERLIVEVKKIFNSMYLDDGRLMSSFNDLMQRLWIVDSVERLGIARHFKNEITSALDYVFRYWEENGIGCGRDSIVTDLNSTALGFRTLRLHGY-TVSPEVLKAFQDQNGQFVCSPGQTEGEIRSVLNLYRASLIAFPGEKVMEEAEIFSTRYLKEALQK 253          
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: TPSD5_ABIGR (Gamma-humulene synthase OS=Abies grandis GN=ag5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 65/239 (27.20%), Postives = 103/239 (43.10%), Query Frame = 3
Query:  162 TTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDN----KVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIH------------NKNTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSS--------IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHAFELHYIGGCEDW 806
            +T +K  + +I   +++    +W  D IQSL+S Y   +Y  + EKL E++  +   D        D D + +L+++D +  LG+  HF+ EIK  LD ++              +  K L ATAL FR LR + YN         F D+ G F   S  +E                  +S        +  +A  FTT YLK+ +A  +   + DE L   VK+A E  +    + W
Sbjct:   11 STDLKSTESSI---TSNRHGNMWEDDRIQSLNSPYGAPAYQERSEKLIEEIKLLFLSDMDDSCNDSDRDLIKRLEIVDTVECLGIDRHFQPEIKLALDYVYRCWNERGIGEGSRDSLKKDLNATALGFRALRLHRYNVS-SGVLENFRDDNGQFFCGSTVEEEGAEAYNKHVRCMLSLSRASNILFPGEKVMEEAKAFTTNYLKKVLAGREA-THVDESLLGEVKYALEFPWHCSVQRW 244          
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: TPSD9_ABIGR (Terpinolene synthase, chloroplastic OS=Abies grandis GN=ag9 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 52/173 (30.06%), Postives = 87/173 (50.29%), Query Frame = 3
Query:  138 VQYPMAASTTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQ----QDNKVVDL--DPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNK-----------SLYATALKFRILRQYGY--NTPVKESFSRFMDEKGSFKLSSHSDE 599
            V + +  S ++    D  + RR  ++   +W  D+IQSL + Y   SY  + ++L  +V  +      +D +++    D + +L ++DN+ RLG+  HF++EIK  LD +++    K            L +TAL FRILR +GY  ++ V E F     EKG F  S+   E
Sbjct:   45 VTHSLRMSLSTAVSDDHGVQRRIVEFHSNLWDDDFIQSLSTPYGAPSYRERADRLIVEVKGIFTSISAEDGELITPLNDLIQRLLMVDNVERLGIDRHFKNEIKAALDYVYSYWNEKGIGSGSDSGVADLNSTALGFRILRLHGYSVSSDVLEHFKE-EKEKGQFVCSAIQTE 216          
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 3.524e-11
Identity = 54/207 (26.09%), Postives = 83/207 (40.10%), Query Frame = 3
Query:  198 RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHN--------KNTNKSLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHAFELHYIGG 794
            R  AD+   IW         S    E++  +   LKE V             +P+  +  ID L RLGVSYHFE +I   LD+  +        +     LY   + F++ RQ+G+     + F +F DE G FK    +D   GM                I  +A+ F+ ++L+E      I      +L   +K+A +  Y  G
Sbjct:    7 RPLADFPANIWEDPLTSFSKSDLGTETFKEKHSTLKEAVKEAFMSSKA----NPIENIKFIDALCRLGVSYHFEKDIVEQLDKSFDCLDFPQMVRQEGCDLYTVGIIFQVFRQFGFKLSA-DVFEKFKDENGKFKGHLVTD-AYGM-LSLYEAAQWGTHGEDIIDEALAFSRSHLEE------ISSRSSPHLAIRIKNALKHPYHKG 200          

HSP 2 Score: 27.335 bits (59), Expect = 3.524e-11
Identity = 13/34 (38.24%), Postives = 18/34 (52.94%), Query Frame = 2
Query:  779 PLHWRMRRLXAXWFIHVYEKWTXNDPILLELAKV 880
            P H  + R+    +I  YE+    DP LLE AK+
Sbjct:  196 PYHKGISRIETRQYISYYEEEESCDPTLLEFAKI 229          
BLAST of EY711115 vs. ExPASy Swiss-Prot
Match: TPSD6_ABIGR (Camphene synthase, chloroplastic OS=Abies grandis GN=ag6 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 60/218 (27.52%), Postives = 99/218 (45.41%), Query Frame = 3
Query:  114 GFVPPITRVQYPMAASTTSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSK-YKGESYARQLEKLKEQVSAMLQQDNKVVD--LDPLHQLDLIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNK-----------SLYATALKFRILRQYGYNTPVKESFSRFMDEKGSFKLSSH---SDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLKEWVAK 716
            G   P   V + +    TS+   D ++ RR  +Y   +W  D+IQSL S  Y    Y  + ++L  +V  ++     + D   D L +L L+D++ RLG+  HF+ EIK  LD +++    K            L +TAL  R LR +GY T   +  + F D+ G F  +++     E +G+                +  +A  F+T YL+E + K
Sbjct:   32 GICRPGKSVAHSINMCLTSVASTD-SVQRRVGNYHSNLWDDDFIQSLISTPYGAPDYRERADRLIGEVKDIMFNFKSLEDGGNDLLQRLLLVDDVERLGIDRHFKKEIKTALDYVNSYWNEKGIGCGRESVVTDLNSTALGLRTLRLHGY-TVSSDVLNVFKDKNGQFSSTANIQIEGEIRGV-LNLFRASLVAFPGEKVMDEAETFSTKYLREALQK 246          
The following BLAST results are available for this feature:
BLAST of EY711115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
TPSDB_ABIGR7.284e-1434.27Limonene/alpha-pinene synthase, chloroplastic OS=A... [more]
TPSD8_ABIGR7.284e-1429.03Beta-phellandrene synthase, chloroplastic OS=Abies... [more]
TPSD4_ABIGR2.119e-1327.19Delta-selinene synthase OS=Abies grandis GN=ag4 PE... [more]
CASS_RICCO3.615e-1332.00Casbene synthase, chloroplastic OS=Ricinus communi... [more]
TPSD2_ABIGR6.167e-1329.47Myrcene synthase, chloroplastic OS=Abies grandis G... [more]
TPSD5_ABIGR1.052e-1227.20Gamma-humulene synthase OS=Abies grandis GN=ag5 PE... [more]
TPSD9_ABIGR3.060e-1230.06Terpinolene synthase, chloroplastic OS=Abies grand... [more]
HUMS_ARATH3.524e-1126.09Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
TPSD6_ABIGR9.845e-1127.52Camphene synthase, chloroplastic OS=Abies grandis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-H10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711115 ID=EY711115; Name=EY711115; organism=Citrus sinensis; type=EST; length=906bp
CCACGCGTCCGCTTGAAATTATATTCTAAGTCATGGCTCTTAATCTGCTA
TCTTCACTACCTGCGGTATGCAATTTCACCAGATTATCATTACCATTATC
AAGCAAAGTTAATGGCTTTGTTCCTCCTATTACTCGAGTCCAATATCCCA
TGGCTGCATCCACTACTTCTATTAAGCCTGTCGATCAAACCATTATTAGG
CGATCTGCCGATTACGGGCCAACCATTTGGAGTTTTGATTATATTCAATC
ACTTGACAGTAAATATAAGGGAGAATCGTATGCCAGACAATTGGAAAAGC
TGAAGGAACAAGTAAGCGCGATGCTACAGCAGGATAATAAAGTGGTGGAT
TTGGATCCTTTACATCAACTTGACCTCATCGATAATCTGCACAGACTTGG
AGTATCTTATCACTTTGAGGATGAAATAAAAAGAACTTTGGATAGGATAC
ACAACAAGAATACTAATAAAAGTTTATATGCCACAGCACTCAAATTTAGA
ATCCTAAGGCAATATGGTTACAATACACCTGTAAAAGAAAGTTTTTCACG
TTTCATGGATGAGAAGGGGAGCTTTAAGTTATCAAGCCACAGTGACGAAT
GCAAAGGAATGTTAGCTCTGTATGAAGCTGCATACCTCCTGGTAGAAGAA
GAAAGCAGTATCTTTCGTGACGCTATAAGGTTCACCACCGCATATCTCAA
AGAATGGGTGGCCAAGCATGATATTGACAAAAATGATGATGAATATCTTT
GTACATTAGTGAAACATGCTTTTGAACTCCACTACATTGGAGGATGCGAA
GATTGGANGCAANGTGGTTCATCCATGTATACGAAAAGTGGACANACAAT
GACCCTATCTTGCTCGAGCTTGCTAAAGTGACTATAATATTGTGCAGGCA
TACACT
back to top