EY711108

Overview
NameEY711108
Unique NameEY711108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_BIFAA (Elongation factor Tu OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.431e-20
Identity = 66/198 (33.33%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKAXYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGXH 690
            + K H+NI  IGHVD GK+T T         I K + E +     E +         +D    E  RGITI+IA  +++T K +   +D PGH DF+KNMITG +Q D A+L++ +T G          QTREH LLA  +GV +++   NK D           + + +EV   L + G++ +  P + +S +   H
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLHEEYPDVNPEYDFNQ------IDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPKILVALNKCDMVD---DDELIELVEEEVRDLLDENGFDRD-CPVIHVSAYGALH 181          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_SYNSC (Elongation factor Tu OS=Synechococcus sp. (strain CC9605) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 66/195 (33.85%), Postives = 97/195 (49.74%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKAXYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 681
            + K H+NI  IGHVD GK+T T  +   L           +K  AE+      YA + D    ERERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L+  +T G          QT+EH LLA  +GV  ++   NK D       +   + +  E+   L    +  + +P V +SG +
Sbjct:    8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLA----------KKGQAEVQN----YADI-DGAPEERERGITINTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPVVQVSGLK 177          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 66/195 (33.85%), Postives = 97/195 (49.74%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKAXYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 681
            + K H+NI  IGHVD GK+T T  +   L           +K  AE+      YA + D    ERERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L+  +T G          QT+EH LLA  +GV  ++   NK D       +   + +  E+   L    +  + +P V +SG +
Sbjct:    8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLA----------KKGQAEVQN----YADI-DGAPEERERGITINTAHVEYETDSRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVELEIRELLSSYDFPGDDIPVVQVSGLK 177          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_STRU0 (Elongation factor Tu OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 558
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKID 142          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_STRPZ (Elongation factor Tu OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 558
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVD 142          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_STRP8 (Elongation factor Tu OS=Streptococcus pyogenes serotype M18 GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 558
            + K H+NI  IGHVD GK+T T  +          V+ R    +    K    YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVD 142          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_RICPA (Elongation factor Tu OS=Rickettsia parkeri GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKAXYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 681
            + K H+NI  IGHVD GK++ T  +   + K GG      ++                  +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+  +++P +  S  +
Sbjct:    8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DSDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQ 177          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_RICMO (Elongation factor Tu OS=Rickettsia montana GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKAXYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 681
            + K H+NI  IGHVD GK++ T  +   + K GG      ++                  +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+  +++P +  S  +
Sbjct:    8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DSDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQ 177          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_PROMP (Elongation factor Tu OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 62/195 (31.79%), Postives = 97/195 (49.74%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKAXYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 681
            + K H+NI  IGHVD GK+T T         I   + ++ + +A +           +D    ERERGITI+ A  ++ET + +   +D PGH D++KNMITG +Q D A+L+  +T G          QT+EH LLA  +GV  ++   NK D       +   + +  E+   L    +  + +P V +SG +
Sbjct:    8 RNKPHVNIGTIGHVDHGKTTLTA-------AITNVLAKKGQAQAQDYGD--------IDGAPEERERGITINTAHVEYETAERHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLDSYDFPGDDIPIVQVSGLK 177          
BLAST of EY711108 vs. ExPASy Swiss-Prot
Match: EFTU_LEUMM (Elongation factor Tu OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 64/187 (34.22%), Postives = 96/187 (51.34%), Query Frame = 1
Query:   97 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKAXYDEIVKEVSSYLKKVGYNPEKVP 657
            + K H+NI  IGHVD GK+T T         I K + E+   +A +  +        +D    E+ERGITI+ +  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L +  +  + +P
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLAEKQGVDATDFAE--------IDNAPEEKERGITINTSHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYLVVFLNKTDLVD---DEELVELVEMEVRELLSEYDFPGDDIP 169          
The following BLAST results are available for this feature:
BLAST of EY711108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BIFAA1.431e-2033.33Elongation factor Tu OS=Bifidobacterium adolescent... [more]
EFTU_SYNSC1.869e-2033.85Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_SYNS31.869e-2033.85Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_STRU01.869e-2041.56Elongation factor Tu OS=Streptococcus uberis (stra... [more]
EFTU_STRPZ1.869e-2041.56Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRP81.869e-2041.56Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_RICPA1.869e-2031.82Elongation factor Tu OS=Rickettsia parkeri GN=tuf ... [more]
EFTU_RICMO1.869e-2031.82Elongation factor Tu OS=Rickettsia montana GN=tuf ... [more]
EFTU_PROMP1.869e-2031.79Elongation factor Tu OS=Prochlorococcus marinus su... [more]
EFTU_LEUMM1.869e-2034.22Elongation factor Tu OS=Leuconostoc mesenteroides ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711108 ID=EY711108; Name=EY711108; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGCGCTCTCAGTTTCTGCAAGTCGGCGAGAGAGAAACCTTT
TAGCAAATTTCATATCAAGGTTTTATACTAGATTTGCATAATGGGTAAGG
AGAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAG
TCGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCG
TGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCAT
TCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGT
ATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTG
CACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTA
CCGGTACCTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACC
GGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGC
TTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACA
AGATGGACGCCACCACCCCCAAGTACTCAAAGGCTANGTACGATGAAATT
GTGAAGGAGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAA
AGTCCCATTCGTGCCCATCTCTGGTTTCGAGGGTGANCACATGATTGAGA
GGTCTACCCACCTTGACTGGTACANGGGTCCNACCCTGCTGGACGCTCTT
TGACATATNCATGAGCCGAANGAGGCCCTCAGACAGCCCCTTCGTCTNGC
ACTCCAGACGTGTACAAGATGGTGGCATTGNAACCGTCCCANTGGTCGCG
TTTAGACCGGTGTCCTCAGCCTGGTATGGTGGTGACATTTGGCCCCTCTG
GATGACACTGGAGGTAGTCTGTTGAGTGCACAC
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