EY711080

Overview
NameEY711080
Unique NameEY711080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: YNGI_BACSU (Putative acyl-CoA synthetase yngI OS=Bacillus subtilis GN=yngI PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12
Identity = 53/162 (32.72%), Postives = 79/162 (48.77%), Query Frame = 2
Query:  221 SPLSPDVMDFLKVCFGCQ-VMEGYGMTETSCIISAIDKGDNLSGHV---GSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            SP   +VM  +    G + +   YG TE S +I+     D+    V   G   P  E+K+V   E     E Q   +GE+C RG  V +GYYK++  TR+ I+ DGWL TGD+ +    G  +I  R K++  +  GE + P +IE    +   VL   + G
Sbjct:  315 SPCPSEVMKAVIERMGMKDITIAYGQTEASPVITQTRANDSFIRRVETTGRALPHTEVKIV---EPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDML-IRGGENIYPREIEEFLYQHPAVLDVQVVG 472          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12
Identity = 45/147 (30.61%), Postives = 79/147 (53.74%), Query Frame = 2
Query:  215 GASPLSPDVMD-FLKVCFGCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIE 646
            G +PLS +V + F +     ++++GYG+TE++ I ++ D  +     G  G  + + E ++VD           P   GE+ ++GP + +GY+ NE  T   +D +GWL TGD+      G + ++DR K + K  +G  VAP ++E
Sbjct:  315 GGAPLSKEVTEGFAEKYPTVKILQGYGLTESTGIGASTDTVEESRRYGTAGKLSASMEGRIVDPVTGQILG---PKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKY-KGYQVAPAELE 457          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACSF3_XENLA (Acyl-CoA synthetase family member 3, mitochondrial OS=Xenopus laevis GN=acsf3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.856e-12
Identity = 45/147 (30.61%), Postives = 69/147 (46.94%), Query Frame = 2
Query:  173 IRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEM----NYTSEDQ------------PHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG 565
            +R     R+R M SG+S L   V++  +   G  ++E YGMTE    ++    G  + G VG+P P  E++ V         +YT+  Q             +  GE+ VRGP VF+ Y+   + T+E    DGW  TGD  ++  G
Sbjct:  320 VRAACQERIRLMVSGSSALPVPVLERWQEITGHTLLERYGMTEIGMALTNPLHGPRVPGAVGAPLPGVEVRTVTQNPRKEGTSYTTHAQGDSTGTMVSVGLENREGELQVRGPAVFKEYWNKRLDTQEAFTSDGWFKTGDTAMYKDG 466          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: MENE_BACSU (2-succinylbenzoate--CoA ligase OS=Bacillus subtilis GN=menE PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 2
Query:  194 RVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            R   +G G +PL       L+ C   G  V + YGMTET   I  +    ++   G  G P  +CEIK+    ++      +P+  GEI V+GP V + Y+  E    E    +GWL TGD+G     G L ++DR+ ++  ++ GE + P ++E+V      V +  + G
Sbjct:  258 RCILLGGGPAPLP-----LLEECREKGFPVFQSYGMTETCSQIVTLSPEFSMEKLGSAGKPLFSCEIKIERDGQVC-----EPYEHGEIMVKGPNVMKSYFNRE-SANEASFQNGWLKTGDLGYLDNEGFLYVLDRRSDLI-ISGGENIYPAEVESVLLSHPAVAEAGVSG 416          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMD-FLKVCFGCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIE 646
            +R +  G +PLS +VMD FL+      + +GY +TE+    ++ +  +     G VG  +   E ++VD         +QP   GE+ ++GP + +GY+ NE  T E I+ +GWL  GD+      G L ++DR K + K  +G  V P ++E
Sbjct:  317 LRKVRCGGAPLSKEVMDSFLEKYPTVNIFQGYALTESHGSGASTESVEESLKYGAVGLLSSGIEARIVDPDTGRVMGVNQP---GELWLKGPSISKGYFGNEEATNETINLEGWLKLGDLCYIDEDGFLFVVDRLKELIKY-KGYQVPPAELE 465          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: MENE_BACP2 (2-succinylbenzoate--CoA ligase OS=Bacillus pumilus (strain SAFR-032) GN=menE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 55/169 (32.54%), Postives = 78/169 (46.15%), Query Frame = 2
Query:  194 RVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            R   +G G +PL+       K   G  V + YGMTET   I  +    ++   G  G P   CE+K+ D      T   +P   GEI V+G  V +GY   E  T    D  GWL TGDIG     G L ++DR+ ++  ++ GE + P +IE V      V +  + G
Sbjct:  257 RCLLLGGGPAPLAMLQESKEK---GFPVFQSYGMTETCSQIVTLAPEFSVEKLGSAGKPLFGCELKIQDG-----TRICRPFEHGEIMVKGANVMKGYLYREESTAAAFD-QGWLKTGDIGYVDEEGFLFVLDRRSDLI-ISGGENIYPAEIEAVLLTHSHVKEAGVTG 415          
The following BLAST results are available for this feature:
BLAST of EY711080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
YNGI_BACSU3.975e-1232.72Putative acyl-CoA synthetase yngI OS=Bacillus subt... [more]
4CLL5_ARATH3.975e-1230.614-coumarate--CoA ligase-like 5 OS=Arabidopsis thal... [more]
ACSF3_XENLA8.856e-1230.61Acyl-CoA synthetase family member 3, mitochondrial... [more]
MENE_BACSU2.577e-1130.412-succinylbenzoate--CoA ligase OS=Bacillus subtili... [more]
4CLL3_ARATH3.365e-1131.374-coumarate--CoA ligase-like 3 OS=Arabidopsis thal... [more]
MENE_BACP29.792e-1132.542-succinylbenzoate--CoA ligase OS=Bacillus pumilus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711080 ID=EY711080; Name=EY711080; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGCTCGGTTGTATAATCGAATATATTCTGGGATCACAAATG
CAGTAAAGGCTTCAGGGACTCTAAGGGAGAAGCTTTTCACAGCTGCATAC
AATTCCAAGAAGCAAGCTATAGTTAGTGGCCAAACTCCATCAAAGATGTG
GGACAGATTAGTATTTAATAAGATAAGGGAAAGGCTTGGAGGACGGGTTC
GTTTTATGGGATCAGGTGCTTCACCTTTGTCTCCAGATGTAATGGACTTC
TTGAAGGTGTGCTTTGGTTGTCAAGTAATGGAAGGATATGGTATGACTGA
GACTTCTTGTATCATTAGCGCTATAGACAAGGGTGATAACTTATCTGGTC
ATGTTGGATCTCCTAACCCTGCTTGTGAAATTAAACTTGTGGATGTTCCT
GAAATGAATTATACCTCTGAGGATCAGCCGCATCCCCGTGGCGAAATCTG
TGTCAGGGGTCCCATTGTTTTCCAAGGCTACTACAAAAATGAAGTTCAAA
CGAGAGAAGTGATTGATGGCGATGGTTGGCTGCATACAGGAGATATTGGT
TTGTGGTTGCCTGGTGGCCGACTTAAGATTATAGATAGAAAAAAAAACAT
TTTTAAGTTGGCGCAAGGAGAGTATGTAGCACCTGAGAAGATTGAGAATG
TTTATGCAAAGTGCAAGTTTGTTTTGCAGTGCTTTATATATGGTGATAGC
TTCAACTCTTGTTTAGTTGCTATTGTTGCAGTGGATCCTGATGTTTTAAA
GATTGGGCTGCATCTCAGGGGATCAAGTTTGAGGATTTAGAGCAGTTATG
CAATGATCTGAGGGCAAGAGCTGCTGTTCTTGCTGAGATGATGCANTTGG
AGAGGAAGCCANNTGAGAGGTTTCGATATGCAAAACTGTGACTCGATGCT
G
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