EY711080

Overview
NameEY711080
Unique NameEY711080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG1_BOVIN (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Bos taurus GN=ACSBG1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 75/257 (29.18%), Postives = 115/257 (44.75%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTL-REKLFTAAYNSKKQAIVSGQTPSKMW-----DRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD--SFNSCLVAI-VAVDPDVLK 751
            R++ +I   I      SG + R+ L  A   + +Q +    +  K +     D LV  K+R+ LG  + +    GA+P++ +   F  +    ++  GYG++ETS         +      G   P C++KLV+         +     GEIC+ G  +F GY   E +T E ID +GWLHTGD G     G L I  R K +   A GE V P  IE  V  +   +    + GD   F S L+ +   +DPD  +
Sbjct:  360 RVWEKIMEQIQEVAAQSGFIWRKMLLWAMSVTLEQNLTCPSSDLKPFTTRLADYLVLAKVRQALGFAKCQKNFYGAAPMTAETQHFF-LGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSGKVVPGCQVKLVN---------EDAEGIGEICLWGRTIFMGYLNMEDKTCEAIDAEGWLHTGDTGRLDADGFLYITGRLKELIITAGGENVPPVPIEEAVKTELPIIRNAMLIGDQRKFLSMLLTLKCTLDPDTFE 606          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CL3_DICDI (Probable 4-coumarate--CoA ligase 3 OS=Dictyostelium discoideum GN=4cl3 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 58/153 (37.91%), Postives = 81/153 (52.94%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCFGCQVM--EGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPH-PRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIE 646
            +R +  GA+PL  ++ D +K  F  +++  +GYG TE S        G   SG  G+  P    K++     + T E+     +GEIC++GP V  GYY NE  T EVID DG+L TGDIG     G   IIDR K + K  +G  V P ++E
Sbjct:  316 LRTLFCGAAPLGSEIEDLIKERFKGRLVIKQGYGATELSPCCFVTPNGLVKSGSSGTLLPNLLAKIIS----SETGENLGMGEKGEICIKGPNVMLGYYNNEKATNEVIDKDGFLKTGDIGYVDEDGYFFIIDRSKELIK-CKGFQVPPAELE 463          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCFGCQVM-EGYGMTETSCIIS-----AIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            +R + SGA+PL  ++ + L+      V+ +GYGMTE   ++S     A       SG  G+     E+K+VD         +QP   GEIC+RG  + +GY  +E  T   ID +GWLHTGD+G       + I+DR K + K  +G  V P ++E +
Sbjct:  320 IRLVLSGAAPLGKELEEALRNRMPQAVLGQGYGMTEAGPVLSMCLGFAKQPFQTKSGSCGTVVRNAELKVVDPETGRSLGYNQP---GEICIRGQQIMKGYLNDEAATASTIDSEGWLHTGDVGYVDDDDEIFIVDRVKELIKY-KGFQVPPAELEGL 473          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: MENE_BACCN (2-succinylbenzoate--CoA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=menE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15
Identity = 63/185 (34.05%), Postives = 92/185 (49.73%), Query Frame = 2
Query:  179 ERLGG-------RVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS 700
            ERLG        R   +G G +P        L+ C   G  V + YGMTETS  I  +     L+  G  G P   C++++    ++   + +     GEI V+GP V +GY+K E  TRE I  DGWLHTGD+G     G L ++DR+ ++  ++ GE + P +IE V      VL+  + G S
Sbjct:  243 ERLGNETYPSSLRCMLLGGGPAP-----KPLLEACVQKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFPCQLRIEKDGKVMPANVE-----GEIVVKGPNVTRGYFKREDATRETIV-DGWLHTGDLGYVDDEGFLYVLDRRSDLI-ISGGENIYPAQIEEVLLSHPLVLEAGVVGKS 415          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CL4_ARATH (4-coumarate--CoA ligase 4 OS=Arabidopsis thaliana GN=4CL4 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15
Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCFGCQVM-EGYGMTETSCIISAIDKGDN----LSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPR-GEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIE 646
            VR M SGA+ L  ++ D +++ F   +  +GYGMTE+  +  ++    N     SG  G+     E+K+VD      T    P  + GEICVRG  + +GY  +   T   ID DGWLHTGDIG       + I+DR K + K  +G  VAP ++E
Sbjct:  331 VRIMLSGAATLKKELEDAVRLKFPNAIFGQGYGMTESGTVAKSLAFAKNPFKTKSGACGTVIRNAEMKVVDTE----TGISLPRNKSGEICVRGHQLMKGYLNDPEATARTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKF-KGYQVAPAELE 481          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG1_HUMAN (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Homo sapiens GN=ACSBG1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 74/254 (29.13%), Postives = 111/254 (43.70%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREK--LFTAAYNSKKQAIVSGQT----PSKMWDRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD--SFNSCLVAI-VAVDPD 742
            R++ +I   I      SG +R K  L+  +   ++     G       +++ D LV  K+R+ LG  + +    GA+P+  +   F  +    ++  GYG++ETS         +      G   P C +KLV+               GEIC+ G  +F GY   E +T E ID +GWLHTGD G     G L I  R K +   A GE V P  IE  V  +   +    + GD   F S L+ +   +DPD
Sbjct:  377 RVWEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDLKPFTTRLADYLVLAKVRQALGFAKCQKNFYGAAPMMAETQHFF-LGLNIRLYAGYGLSETSGPHFMSSPYNYRLYSSGKLVPGCRVKLVN---------QDAEGIGEICLWGRTIFMGYLNMEDKTCEAIDEEGWLHTGDAGRLDADGFLYITGRLKELIITAGGENVPPVPIEEAVKMELPIISNAMLIGDQRKFLSMLLTLKCTLDPD 620          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CL4_ORYSJ (Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa subsp. japonica GN=4CL4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 54/156 (34.62%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMD-FLKVCFGCQVMEGYGMTETS-----CIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIE 646
            +R + SGA+P+  D+ D F+       + +GYGMTE       C+  A +  +  SG  G+     E+K+VD         +Q    GEIC+RG  + +GY  +   T+  ID  GWLHTGDIG       + I+DR K I K  +G  V P ++E
Sbjct:  311 IRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQS---GEICIRGEQIMKGYLNDPESTKNTIDKGGWLHTGDIGYVDDDDEIFIVDRLKEIIKY-KGFQVPPAELE 462          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCFA_YERPE (Long-chain-fatty-acid--CoA ligase OS=Yersinia pestis GN=fadD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 58/167 (34.73%), Postives = 88/167 (52.69%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            +R    G  P+   V +  +   G  ++EGYG+TE S +++       + SG +G P P+ +++L D  + N     +P   GE+ VRGP V  GY++    T +V+  DGWL TGDI      G L+I+DRKK++  L  G  V P +IE V A    VL+  + G
Sbjct:  327 LRLSVGGGMPVQKAVAEKWETLTGKHLLEGYGLTECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLRD-DDGNDVELGKP---GELWVRGPQVMLGYWQRPDATDDVLK-DGWLATGDIATMDEDGFLRIVDRKKDMI-LVSGFNVYPNEIEEVVALHAKVLESAVIG 487          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG2_RAT (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus norvegicus GN=Acsbg2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 78/238 (32.77%), Postives = 101/238 (42.44%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREKLFTAA------YNSKKQAIVSGQTPS--KMWDRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD 697
            R++ ++   I   V  S  LR+K F  A       N+KK  +     P   +M   LVF K+R  LG        SGASPLS DV +F  +     + E YGMTE S   +   K        G     C+         N   +      GE+C+ G  VF GY   E  T EV+D DGWLH+GDIG       L I  R K +   A GE + P  IE  V  K   +    + GD
Sbjct:  322 RVWEKMQDTIKENVAKSSNLRKKAFAWAKMLGLKVNTKKM-LGKRDIPMNYRMAKALVFTKVRTSLGLDNCHTFFSGASPLSQDVSEFF-LSLDIPIGEIYGMTECSGPHTVSCKSIYRVLSCGKVLNGCK---------NMLYKQNKDGVGEVCMWGRHVFMGYLGKEDATLEVLDEDGWLHSGDIGRLDSHDFLYITGRIKEVLITAGGENIWPIPIETLVKEKIPIISHAMLVGD 548          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 55/159 (34.59%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCFGCQVM-EGYGMTETSCIIS-----AIDKGDNLSGHVGSPNPACEIKLVDVPEMNYT-SEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            +R + SGA+PL  ++ D L+      +  +GYGMTE   ++S     A +     SG  G+     E+K+VD P+  ++   + P   GEIC+RGP + +GY  +   T   ID +GWLHTGDIG       + I+DR K + K  +G  V P ++E++
Sbjct:  332 IRIVLSGAAPLGKELEDALRARLPQAIFGQGYGMTEAGPVLSMCPAFAKEPTPAKSGSCGTVVRNAELKVVD-PDTGFSLGRNLP---GEICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKF-KGFQVPPAELESL 485          
The following BLAST results are available for this feature:
BLAST of EY711080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ACBG1_BOVIN1.320e-1529.18Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Bos ta... [more]
4CL3_DICDI1.320e-1537.91Probable 4-coumarate--CoA ligase 3 OS=Dictyosteliu... [more]
4CL2_SOYBN1.320e-1534.184-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2[more]
MENE_BACCN2.252e-1534.052-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
4CL4_ARATH2.252e-1536.544-coumarate--CoA ligase 4 OS=Arabidopsis thaliana ... [more]
ACBG1_HUMAN3.842e-1529.13Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Homo s... [more]
4CL4_ORYSJ3.842e-1534.62Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa... [more]
LCFA_YERPE5.017e-1534.73Long-chain-fatty-acid--CoA ligase OS=Yersinia pest... [more]
ACBG2_RAT5.017e-1532.77Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus... [more]
4CL2_ORYSJ5.017e-1534.59Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711080 ID=EY711080; Name=EY711080; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGCTCGGTTGTATAATCGAATATATTCTGGGATCACAAATG
CAGTAAAGGCTTCAGGGACTCTAAGGGAGAAGCTTTTCACAGCTGCATAC
AATTCCAAGAAGCAAGCTATAGTTAGTGGCCAAACTCCATCAAAGATGTG
GGACAGATTAGTATTTAATAAGATAAGGGAAAGGCTTGGAGGACGGGTTC
GTTTTATGGGATCAGGTGCTTCACCTTTGTCTCCAGATGTAATGGACTTC
TTGAAGGTGTGCTTTGGTTGTCAAGTAATGGAAGGATATGGTATGACTGA
GACTTCTTGTATCATTAGCGCTATAGACAAGGGTGATAACTTATCTGGTC
ATGTTGGATCTCCTAACCCTGCTTGTGAAATTAAACTTGTGGATGTTCCT
GAAATGAATTATACCTCTGAGGATCAGCCGCATCCCCGTGGCGAAATCTG
TGTCAGGGGTCCCATTGTTTTCCAAGGCTACTACAAAAATGAAGTTCAAA
CGAGAGAAGTGATTGATGGCGATGGTTGGCTGCATACAGGAGATATTGGT
TTGTGGTTGCCTGGTGGCCGACTTAAGATTATAGATAGAAAAAAAAACAT
TTTTAAGTTGGCGCAAGGAGAGTATGTAGCACCTGAGAAGATTGAGAATG
TTTATGCAAAGTGCAAGTTTGTTTTGCAGTGCTTTATATATGGTGATAGC
TTCAACTCTTGTTTAGTTGCTATTGTTGCAGTGGATCCTGATGTTTTAAA
GATTGGGCTGCATCTCAGGGGATCAAGTTTGAGGATTTAGAGCAGTTATG
CAATGATCTGAGGGCAAGAGCTGCTGTTCTTGCTGAGATGATGCANTTGG
AGAGGAAGCCANNTGAGAGGTTTCGATATGCAAAACTGTGACTCGATGCT
G
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