EY711080

Overview
NameEY711080
Unique NameEY711080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 52/156 (33.33%), Postives = 89/156 (57.05%), Query Frame = 2
Query:  191 GRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPR-GEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIE 646
            G++R + SG +PL  ++++  +  +   ++++GYG+TE++ I ++ D  +     G  G  +P  E K+VD P+   + E  P  R GE+ +RGP V +GY+KN   T+  +  DGWL TGD+      G L ++DR K + K  +G  V P ++E
Sbjct:  315 GQMRKVLSGGAPLGKELIEGFREKYPQVEILQGYGLTESTAIGASTDSAEESRRYGTAGLLSPNTEAKIVD-PD---SGEALPVNRTGELWIRGPYVMKGYFKNAEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKY-KGYQVPPAELE 465          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCFGCQVM-EGYGMTETSCIIS-----AIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            VRF+ SGA+PL  ++ D L+      ++ +GYGMTE   ++S     A +     SG  G+     E+K+V +        +QP   GEIC+RG  + + Y  +   T   ID +GWLHTGDIG       + I+DR K + K  +G  V P ++E++
Sbjct:  326 VRFVLSGAAPLGKELQDSLRRRLPQAILGQGYGMTEAGPVLSMSLGFAKEPIPTKSGSCGTVVRNAELKVVHLETRLSLGYNQP---GEICIRGQQIMKEYLNDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKF-KGFQVPPAELESL 479          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG2_CHICK (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Gallus gallus GN=ACSBG2 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 70/238 (29.41%), Postives = 112/238 (47.06%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVS-----GQTPS--KMWDRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIIS-AIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD 697
            R++ +I   + +    S TLR K+ + A     Q  +       + P   ++  +LV+ K+R+ +G  R     +GA+P+S + ++F  +     V E YGM+E+S   + +I +   L+   G     C   L+  P+ +          GEIC  G  +F GY   E +T+E ID DGWLH+GD+G     G + I  R K +   A GE V P  IE+ V   C  +    + GD
Sbjct:  376 RVWEKIEEKMKSVGAKSSTLRRKVASWAKGVGLQTNLKWMNGHSEVPMNFRLARQLVYKKVRKAIGLDRCTKCFTGAAPISRETLEFF-LSLNIPVFELYGMSESSGPHTVSIPQAFRLTS-CGKEMAGCRT-LIHKPDADGI--------GEICFAGRHIFMGYLNMEEKTKEAIDKDGWLHSGDLGKCDKDGFIYITGRIKELIITAGGENVPPVPIEDAVKEACPIISNAMLVGD 602          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG1_MACFA (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Macaca fascicularis GN=ACSBG1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.907e-14
Identity = 73/255 (28.63%), Postives = 111/255 (43.53%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREK--LFTAAYNSKKQAIVSGQT----PSKMWDRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD---SFNSCLVAI-VAVDPD 742
            R++ +I   I      SG +R K  L+  +   ++     G       +++ D LV  K+R+ LG  + +    GA+P++ +   F  +    ++  GYG++ETS         +      G   P C +KLV+               GEIC+ G  +F GY   E +T E ID +GWLHTGD G     G L I  R K +   A GE V P  IE  V  +   +    + G     F S L+ +   +DPD
Sbjct:  377 RVWEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPGSDLKPFTTRLADYLVLAKVRQALGFAKCQKNFYGAAPMTAETQHFF-LGLNIRLYAGYGLSETSGPHFMSSPCNYRLYSSGKLVPGCRVKLVN---------QDTEGIGEICLWGRTIFMGYLNMEDKTCEAIDEEGWLHTGDAGRLDADGFLYITGRLKELIITAGGENVPPVPIEEAVKMELPIISNAMLIGTDQRKFLSMLLTLKCTLDPD 621          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG1_RAT (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Rattus norvegicus GN=Acsbg1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 65/236 (27.54%), Postives = 105/236 (44.49%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT------PSKMWDRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD 697
            R++ +I   I      SG +R K+   A +   +  ++  +       S++ D LV  ++R+ LG  + +    GA+P++ +   F  +    ++  GYG++E++         +      G   P C +KLV+               GEIC+ G  +F GY   E +T E ID +GWLHTGD+G     G L I  R K +   A GE V P  IE  V  +   +    + GD
Sbjct:  374 RVWEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPSNDLKPFTSRLADYLVLARVRQALGFAKCQKNFYGAAPMTAETQRFF-LGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSGRVVPGCRVKLVN---------QDADGIGEICLWGRTIFMGYLNMEDKTHEAIDSEGWLHTGDMGRLDDDGFLYITGRLKELIITAGGENVPPVPIEEAVKMELPIISSAMLIGD 599          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG1_MOUSE (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Mus musculus GN=Acsbg1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 70/254 (27.56%), Postives = 114/254 (44.88%), Query Frame = 2
Query:   14 RLYNRIYSGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT------PSKMWDRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD--SFNSCLVAI-VAVDPD 742
            R++ +I   I      SG +R K+   A +   +  ++  +       S++ D LV  ++R+ LG  + +    GA+P++ +   F  +    ++  GYG++E++         +      G   P C +KLV+               GEIC+ G  +F GY   E +T E ID +GWLHTGD+G     G L I  R K +   A GE V P  IE  V  +   +    + GD   F S L+ +   +DP+
Sbjct:  374 RVWEKIMERIQEVAAQSGFIRRKMLLWAMSVTLEQNLTCPSNDLKPFTSRLADYLVLARVRQALGFAKCQKNFYGAAPMTAETQRFF-LGLNIRLYAGYGLSESTGPHFMSSPYNYRLYSSGRVVPGCRVKLVN---------QDADGIGEICLWGRTIFMGYLNMEDKTCEAIDSEGWLHTGDMGRLDADGFLYITGRLKELIITAGGENVPPVPIEEAVKMELPIISSAMLIGDQRKFLSMLLTLKCTLDPE 617          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 56/172 (32.56%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  206 MGSGASPLSPD-VMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGH--VGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSC 712
            + SGA+PLS   + DFL+      +++GYGMTE++ + +     + LS +  VG   P  + K+VD    ++     P  RGE+ ++GP V +GY  N   T+  I  D WL TGDI  +   G L I+DR K I K  +G  +AP  +E V      ++   +       C
Sbjct:  330 VSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMTESTAVGTRGFNSEKLSRYSSVGLLAPNMQAKVVDWSSGSFLP---PGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKY-KGFQIAPADLEAVLVSHPLIIDAAVTAAPNEEC 497          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: MENE_BACLD (2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=menE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.252e-14
Identity = 63/186 (33.87%), Postives = 91/186 (48.92%), Query Frame = 2
Query:  107 KKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQ--VMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            K Q +        M  RL     R     R   +G G +PLS      L+ C   +  V++ YGMTET   I+ +    ++   G  G P  A  IK+    E N T E QP   GEI V+GP V +GY KNE   ++  + DGW  TGDIG +   G L ++DR+ ++  ++ GE + P ++E V
Sbjct:  230 KDQQVTIASVVQTMLSRLAAKVDRCPGSLRCLLLGGGPAPLS-----LLEECKRKRLPVVQSYGMTETCSQIATLAPEYSIEKLGSAGKPLFASSIKI----EKNGT-ECQPGEHGEITVKGPTVMKGYLKNEAANKDSFN-DGWFKTGDIGYFDDDGFLYVLDRRSDLI-ISGGENIYPAEVEAV 403          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14
Identity = 59/175 (33.71%), Postives = 84/175 (48.00%), Query Frame = 2
Query:  194 RVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKL----VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            R   +G G +P        L+ C   G  V + YGMTETS  I  +     L+  G  G P   C++++    V VP         P   GEI V+GP V  GY+  E  TRE I  +GWLHTGD+G     G L ++DR+ ++  ++ GE + P +IE V      V +  + G
Sbjct:  256 RCMLLGGGPAP-----KPLLETCVDKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVP---------PFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLI-ISGGENIYPAQIEEVLLSHPMVAEAGVVG 414          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.247e-14
Identity = 59/175 (33.71%), Postives = 84/175 (48.00%), Query Frame = 2
Query:  194 RVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKL----VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            R   +G G +P        L+ C   G  V + YGMTETS  I  +     L+  G  G P   C++++    V VP         P   GEI V+GP V  GY+  E  TRE I  +GWLHTGD+G     G L ++DR+ ++  ++ GE + P +IE V      V +  + G
Sbjct:  256 RCMLLGGGPAP-----KPLLETCVDKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVP---------PFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLI-ISGGENIYPAQIEEVLLSHPMVAEAGVVG 414          
The following BLAST results are available for this feature:
BLAST of EY711080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
4CLL4_ORYSJ1.118e-1433.334-coumarate--CoA ligase-like 4 OS=Oryza sativa sub... [more]
4CL3_ARATH1.118e-1434.184-coumarate--CoA ligase 3 OS=Arabidopsis thaliana ... [more]
ACBG2_CHICK1.907e-1429.41Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Gallus... [more]
ACBG1_MACFA1.907e-1428.63Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Macaca... [more]
ACBG1_RAT2.490e-1427.54Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Rattus... [more]
ACBG1_MOUSE2.490e-1427.56Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Mus mu... [more]
4CLL6_ARATH2.490e-1432.564-coumarate--CoA ligase-like 6 OS=Arabidopsis thal... [more]
MENE_BACLD3.252e-1433.872-succinylbenzoate--CoA ligase OS=Bacillus licheni... [more]
MENE_BACHK4.247e-1433.712-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
MENE_BACC04.247e-1433.712-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711080 ID=EY711080; Name=EY711080; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGCTCGGTTGTATAATCGAATATATTCTGGGATCACAAATG
CAGTAAAGGCTTCAGGGACTCTAAGGGAGAAGCTTTTCACAGCTGCATAC
AATTCCAAGAAGCAAGCTATAGTTAGTGGCCAAACTCCATCAAAGATGTG
GGACAGATTAGTATTTAATAAGATAAGGGAAAGGCTTGGAGGACGGGTTC
GTTTTATGGGATCAGGTGCTTCACCTTTGTCTCCAGATGTAATGGACTTC
TTGAAGGTGTGCTTTGGTTGTCAAGTAATGGAAGGATATGGTATGACTGA
GACTTCTTGTATCATTAGCGCTATAGACAAGGGTGATAACTTATCTGGTC
ATGTTGGATCTCCTAACCCTGCTTGTGAAATTAAACTTGTGGATGTTCCT
GAAATGAATTATACCTCTGAGGATCAGCCGCATCCCCGTGGCGAAATCTG
TGTCAGGGGTCCCATTGTTTTCCAAGGCTACTACAAAAATGAAGTTCAAA
CGAGAGAAGTGATTGATGGCGATGGTTGGCTGCATACAGGAGATATTGGT
TTGTGGTTGCCTGGTGGCCGACTTAAGATTATAGATAGAAAAAAAAACAT
TTTTAAGTTGGCGCAAGGAGAGTATGTAGCACCTGAGAAGATTGAGAATG
TTTATGCAAAGTGCAAGTTTGTTTTGCAGTGCTTTATATATGGTGATAGC
TTCAACTCTTGTTTAGTTGCTATTGTTGCAGTGGATCCTGATGTTTTAAA
GATTGGGCTGCATCTCAGGGGATCAAGTTTGAGGATTTAGAGCAGTTATG
CAATGATCTGAGGGCAAGAGCTGCTGTTCTTGCTGAGATGATGCANTTGG
AGAGGAAGCCANNTGAGAGGTTTCGATATGCAAAACTGTGACTCGATGCT
G
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