EY711080

Overview
NameEY711080
Unique NameEY711080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCFA_HAEIN (Long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=fadD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 50/130 (38.46%), Postives = 75/130 (57.69%), Query Frame = 2
Query:  266 GCQVMEGYGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            GC ++EGYGMTE S +I+A        +G +G P P  +IK++     +  S+ +    GE+ V+G  V +GY++    T EV+  DGW+ TGDI +      L+I+DRKK+I  L  G  V P +IE+V
Sbjct:  352 GCNIIEGYGMTECSPLIAACPINVVKHNGTIGVPVPNTDIKIIK----DDGSDAKIGEAGELWVKGDQVMRGYWQRPEATSEVLK-DGWMATGDIVIMDESYSLRIVDRKKDII-LVSGFNVYPNEIEDV 475          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 62/187 (33.16%), Postives = 86/187 (45.99%), Query Frame = 2
Query:  179 ERLGG-------RVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKL----VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            ERLG        R   +G G +P        L+ C   G  V + YGMTETS  I  +     L+  G  G P   C +++    V VP             GEI V+GP V  GY+  E  TRE I  +GWLHTGD+G     G L ++DR+ ++  ++ GE + P +IE V      V +  + G
Sbjct:  243 ERLGAETYPSSLRCMLLGGGPAP-----KPILETCVEKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCRLRIEKDGVVVPAFT---------EGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLI-ISGGENIYPAQIEEVLLSHPAVAEAGVVG 413          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 50/156 (32.05%), Postives = 83/156 (53.21%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPR-GEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            +R +G G +PL  D+ +  K  F    +++GYG+TE+S   ++    + +   G VG  +   E K+VD      T E  P  + GE+ +RGP++ +GY  NE  + E +D +GWL TGD+  +     L I+DR K + K  +   V P ++E +
Sbjct:  323 LRSLGCGGAPLGKDIAERFKQKFPDVDIVQGYGLTESSGPAASTFGPEEMVKYGSVGRISENMEAKIVDPS----TGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKY-KAYQVPPVELEQI 473          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG2_XENLA (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Xenopus laevis GN=acsbg2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 75/242 (30.99%), Postives = 110/242 (45.45%), Query Frame = 2
Query:   26 RIYSGITNAVKASG----TLREKLFTAAY------NSKKQAIVSGQTPSKMW----DRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSC--IISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD 697
            R++  +   +KA G    T++ K+ T A       N KK   ++G TP  M     ++LVF K+R+ LG  R     +GA+P++ D ++F  +     V E YGM+E+S    IS  D     S   G     C+ K+          +      GEI   G  VF GY   E +T E +D +GWLH+GDIG     G L I  R K +   A GE + P   E+ V  +   +    + GD
Sbjct:  382 RVWEKMQEKMKAVGAKSSTIKRKMATWAKGVGLETNLKK---MNGSTPHPMKYHVANKLVFKKVRKALGLDRCTKCYTGAAPITKDTLEFF-LSLNIPVYELYGMSESSGPHTISLPDAFRITS--CGKVISGCKTKI---------HQPDSDGSGEILFWGRHVFMGYLNMEDKTHESLDEEGWLHSGDIGKHDENGFLYITGRIKELIITAGGENIPPVPTEDAVKEQVPIISNAMLIGD 608          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: MENE_BACCZ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK / E33L) GN=menE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 58/175 (33.14%), Postives = 83/175 (47.43%), Query Frame = 2
Query:  194 RVRFMGSGASPLSPDVMDFLKVCFGCQ--VMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKL----VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            R   +G G +P        L+ C   +  V + YGMTETS  I  +     L   G  G P   C++++    V VP         P   GEI V+GP V  GY+  E  TRE I  +GWLHTGD+G     G L ++DR+ ++  ++ GE + P +IE V      V +  + G
Sbjct:  256 RCMLLGGGPAP-----KPLLEACVEKRIPVYQTYGMTETSSQICTLSADYMLMKVGSAGKPLFQCQLRIEKDGVVVP---------PFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRSDLI-ISGGENIYPAQIEEVLLSHPMVAEAGVVG 414          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCFA_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 50/162 (30.86%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  212 SGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISA-IDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            SG++ L  +V    +   G +++EGYG++E S +  A    G N  G +G P P+ +  +         +   P+  GEI V+GP V +GY+    +T  V+  DGWL TGD+G     G   I DRKK+I  +A G  + P ++E    + + + +  + G
Sbjct:  330 SGSAALPVEVKQKFEKVTGGKLVEGYGLSEASPVTHANFIWGKNKPGSIGCPWPSTDAAIYSEETGELAA---PYEHGEIIVKGPQVMKGYWNKPEETAAVLR-DGWLFTGDMGYMDEEGFFYIADRKKDII-IAGGYNIYPREVEEALYEHEAIQEIVVAG 486          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: ACBG2_HUMAN (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo sapiens GN=ACSBG2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 65/226 (28.76%), Postives = 103/226 (45.58%), Query Frame = 2
Query:   47 NAVKASGTLREKLFTAAYN-----SKKQAIVSGQTPS--KMWDRLVFNKIRERLG-GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIEN-VYAKCKFVLQCFIYGD 697
            N+ K+ G L++K F  A N     + K+ +    TP   +M   LVF+K++  LG        SG +PL+ +  +F  +     + E YG++E+S   +  ++ +      G     C+         N   +      GEIC+ G  +F GY ++E +T E ID +GWLH+GD+G     G L +    K I   A GE V P  +E  V  K   +    + GD
Sbjct:  334 NSAKSMG-LKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFISGTAPLNQETAEFF-LSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCK---------NMLFQQNKDGIGEICLWGRHIFMGYLESETETTEAIDDEGWLHSGDLGQLDGLGFLYVTGHIKEILITAGGENVPPIPVETLVKKKIPIISNAMLVGD 548          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 52/168 (30.95%), Postives = 84/168 (50.00%), Query Frame = 2
Query:  197 VRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCI--ISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYG 694
            +R   SG + +   ++   +  FG  ++EGYG++E S +   +  D+G    G +G+     E K+VD        E   H  GE+ V+GP V +GYYK  ++T   +  DGWL+TGD+      G   I+DRKK++  +  G  V P ++E V      V +  + G
Sbjct:  285 IRLCISGGASMPVALLTAFEEKFGVTILEGYGLSEASPVTCFNPFDRGRK-PGSIGTSILHVENKVVDP----LGRELPAHQVGELIVKGPNVMKGYYKMPMETEHALK-DGWLYTGDLARRDEDGYFYIVDRKKDMI-IVGGYNVYPREVEEVLYSHPDVKEAVVIG 445          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  212 SGASPLSPDVMD-FLKVCFGCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIE 646
            +G +PLS +V + F++     ++++GYG+TE++ I +++   +     G  G   P  E K+VD         +Q    GE+ +R P V +GY+KN+  T   ID +GWL TGD+      G + ++DR K + K   G  VAP ++E
Sbjct:  335 AGGAPLSREVTEKFVENYPKVKILQGYGLTESTAIAASMFNKEETKRYGASGLLAPNVEGKIVDPDTGRVLGVNQT---GELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIK-CNGYQVAPAELE 478          
BLAST of EY711080 vs. ExPASy Swiss-Prot
Match: 4CLL6_ORYSJ (4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12
Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  215 GASPLSPDVMD-FLKVCFGCQVMEGYGMTETSCIISAIDKGDNLS--GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENV 652
            G +PL  +V   F  V    Q+++ YG+TE++  ++ +   +  +  G VG   P  + K+VD           P  RGE+ +RGP+V +GY  +   T   I  DGWL TGD+  +   G L ++DR K + K  +G  V P ++E++
Sbjct:  366 GGAPLGREVSQRFATVFPSVQIVQSYGLTESTGPVATMAGPEESAAYGSVGRLAPRVQAKIVDTATGEVLG---PGRRGELWIRGPVVMKGYVGDPEATAATITPDGWLKTGDLCYFNEDGYLYVVDRLKELIKY-KGYQVPPAELEHI 510          
The following BLAST results are available for this feature:
BLAST of EY711080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
LCFA_HAEIN2.108e-1338.46Long-chain-fatty-acid--CoA ligase OS=Haemophilus i... [more]
MENE_BACC73.596e-1333.162-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
4CLL9_ARATH3.596e-1332.054-coumarate--CoA ligase-like 9 OS=Arabidopsis thal... [more]
ACBG2_XENLA4.696e-1330.99Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Xenopu... [more]
MENE_BACCZ6.133e-1333.142-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
LCFA_BACSU6.133e-1330.86Long-chain-fatty-acid--CoA ligase OS=Bacillus subt... [more]
ACBG2_HUMAN6.133e-1328.76Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Homo s... [more]
LCFB_BACSU8.010e-1330.95Long-chain-fatty-acid--CoA ligase OS=Bacillus subt... [more]
4CLL2_ARATH8.010e-1332.434-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]
4CLL6_ORYSJ1.046e-1231.544-coumarate--CoA ligase-like 6 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711080 ID=EY711080; Name=EY711080; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGCTCGGTTGTATAATCGAATATATTCTGGGATCACAAATG
CAGTAAAGGCTTCAGGGACTCTAAGGGAGAAGCTTTTCACAGCTGCATAC
AATTCCAAGAAGCAAGCTATAGTTAGTGGCCAAACTCCATCAAAGATGTG
GGACAGATTAGTATTTAATAAGATAAGGGAAAGGCTTGGAGGACGGGTTC
GTTTTATGGGATCAGGTGCTTCACCTTTGTCTCCAGATGTAATGGACTTC
TTGAAGGTGTGCTTTGGTTGTCAAGTAATGGAAGGATATGGTATGACTGA
GACTTCTTGTATCATTAGCGCTATAGACAAGGGTGATAACTTATCTGGTC
ATGTTGGATCTCCTAACCCTGCTTGTGAAATTAAACTTGTGGATGTTCCT
GAAATGAATTATACCTCTGAGGATCAGCCGCATCCCCGTGGCGAAATCTG
TGTCAGGGGTCCCATTGTTTTCCAAGGCTACTACAAAAATGAAGTTCAAA
CGAGAGAAGTGATTGATGGCGATGGTTGGCTGCATACAGGAGATATTGGT
TTGTGGTTGCCTGGTGGCCGACTTAAGATTATAGATAGAAAAAAAAACAT
TTTTAAGTTGGCGCAAGGAGAGTATGTAGCACCTGAGAAGATTGAGAATG
TTTATGCAAAGTGCAAGTTTGTTTTGCAGTGCTTTATATATGGTGATAGC
TTCAACTCTTGTTTAGTTGCTATTGTTGCAGTGGATCCTGATGTTTTAAA
GATTGGGCTGCATCTCAGGGGATCAAGTTTGAGGATTTAGAGCAGTTATG
CAATGATCTGAGGGCAAGAGCTGCTGTTCTTGCTGAGATGATGCANTTGG
AGAGGAAGCCANNTGAGAGGTTTCGATATGCAAAACTGTGACTCGATGCT
G
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