EY711078

Overview
NameEY711078
Unique NameEY711078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.492e-91
Identity = 168/202 (83.17%), Postives = 182/202 (90.10%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLM 753
            DWYDIKAPS F VRNVGKTL +RTQGT IAS+GL HRVFE+SL DL N+E+HAYRKI L AEDVQGKNVLTNFWGM+FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI FTK+  NQ K+T YAQ+SQIRQIRRKMREIM  QAASCDLK LV KFI E+IGREIEKATSSIYPLQNVFIRKVKILKAP+FDLGKLM
Sbjct:   28 DWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKKRQNQNKKTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLM 229          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.803e-87
Identity = 156/220 (70.91%), Postives = 182/220 (82.73%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVGVKVDRPA 807
            DWYDIKAP+ F VRNVGKTL TRTQGT IAS+ L  RVFEVSL DL   E+ A+RK+ L  EDVQG+N LTNFWGM+FTTDKLRSLVRKW TLIEA+VDVKTTD +TLR+FCI FTK+   Q+KRTCYAQ++QIRQIR+KM EI+  +A SCDLK LV KFI E IG++IEK+   IYPLQN FIRKVK+LKAP+FD+ KLM VHGDY E+VG K++RPA
Sbjct:   28 DWYDIKAPTMFTVRNVGKTLVTRTQGTKIASEALKGRVFEVSLADLQKNEDDAFRKMRLRVEDVQGRNCLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDGYTLRVFCISFTKKRQGQIKRTCYAQSAQIRQIRKKMMEIITREATSCDLKELVAKFIPESIGKDIEKSCQGIYPLQNTFIRKVKVLKAPKFDITKLMEVHGDYSEEVGAKIERPA 247          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.551e-83
Identity = 155/223 (69.51%), Postives = 183/223 (82.06%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDY-XEDVGVKVDRPADE 813
            DWYDIKAPS F VRN+GKTL +RTQGT IAS GL  R+FE+SL DL N+E+ ++RK+ L  EDVQGKNVLTNF GM+FTTDK+RSLVRKW +LIE +VDVKTTD +TLR+FCIGFTKR  +Q KRTCYAQ++QIR+IR KM EI+  +  +CDLK LV KFI EVIG+EIEK+ + IYPLQNV+IRKVKILKAP+FDL KLM VHGDY  E VG  V RP +E
Sbjct:   28 DWYDIKAPSMFSVRNIGKTLVSRTQGTKIASDGLKGRIFEISLADLNNDEDQSFRKMKLKCEDVQGKNVLTNFAGMDFTTDKIRSLVRKWFSLIECFVDVKTTDGYTLRVFCIGFTKRRMDQAKRTCYAQSAQIRKIRAKMVEIITRECTTCDLKELVLKFIPEVIGKEIEKSCAGIYPLQNVYIRKVKILKAPKFDLTKLMEVHGDYSGEAVGEAVARPVEE 250          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_LENED (40S ribosomal protein S1 OS=Lentinula edodes GN=RPS1 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.919e-79
Identity = 145/223 (65.02%), Postives = 177/223 (79.37%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVGVKVDRPADEP 816
            DWYDIKAPS F VRNVGKTL  R+QG   A+  L  R+ EVSLGDL  EEE ++RKI L  ++VQGKN LTNF GM+FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR P QV++T YAQ+SQ+R+IR+KM EIM  +A +CDLK LV+KF+ E IGREIEKA+ SIYPLQNV++RK KILKAP+FD+ KLM +HG+  ++ G K+ +   EP
Sbjct:   28 DWYDIKAPSIFDVRNVGKTLVNRSQGLKNANDSLKGRIIEVSLGDLNKEEEQSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETGTKIAKDFKEP 250          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_LACBS (40S ribosomal protein S1 OS=Laccaria bicolor (strain S238N-H82) GN=RPS1 PE=3 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 5.504e-78
Identity = 139/223 (62.33%), Postives = 176/223 (78.92%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVGVKVDRPADEP 816
            DWYDIKAPS F VRNVGKTL  R+QG   A+  L  R+ EVSL DL  +EE ++RKI L  +++QGKN LTNF GM+FT+DKLRSLVRKW TL+EA+VDVKTTD + LRLF IGFTKR P+QV++T YAQ+SQ+R+IR+KM EIM  +A +CDLK LV+KF+ E IGREIEKA  SIYPLQNV++RK KILK+P+FD+ KL+ +HGD  ++ G ++ +   EP
Sbjct:   28 DWYDIKAPSIFEVRNVGKTLANRSQGLKNANDSLKGRIIEVSLADLNKDEEQSFRKIKLRIDEIQGKNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIGFTKRRPSQVRKTTYAQSSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAARSIYPLQNVYVRKAKILKSPKFDMSKLLELHGDSTDETGTRIAKDFKEP 250          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.092e-77
Identity = 140/223 (62.78%), Postives = 175/223 (78.48%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVGVKVDRPADEP 816
            DWYDIKAPS F  RNVGKTL  R+QG   A+  L  R+ EVSL DL  +EE ++RKI L  +++QG+N LTNF GM+FT+DKLRSLVRKW TL+EA+VDVKTTD + LRLF IGFTKR P QVK+T YAQT+Q+R++R+KM EI+  +A SCDLK LV+KF+ E IGREIEKA+ SIYPLQNV+IRK KILKAP+FD+ KL+ +HGD  ++ G +V +   EP
Sbjct:   28 DWYDIKAPSIFETRNVGKTLVNRSQGLKNANDSLRGRIIEVSLADLNKDEEQSFRKIKLRVDEIQGRNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIGFTKRRPTQVKKTTYAQTAQVRELRKKMFEIITREATSCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYIRKAKILKAPKFDVSKLLELHGDSTDESGTRVTKDFKEP 250          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 6.086e-77
Identity = 143/223 (64.13%), Postives = 173/223 (77.58%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVGVKVDRPADEP 816
            DWYDIKAPS F  RNVGKTL  R+ G   A+  L  R+ E+SL DL N+EE A+RKI L  ++VQGKN LTNF GM+F++DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR P QV++T YAQ+SQIRQIR+KM EIM  +A+SCDLK LV+KFI E IGREIEKA   IYPLQNVF+ K KILKAP+FD+ KL+ +HG+  ++ G +V +   EP
Sbjct:   28 DWYDIKAPSIFEKRNVGKTLVNRSSGLKNANDSLKGRIVEISLADLNNDEEQAFRKIKLRIDEVQGKNCLTNFHGMSFSSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRKTTYAQSSQIRQIRQKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAARGIYPLQNVFVHKAKILKAPKFDMSKLLELHGESTDETGTRVVKDFKEP 250          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_PYRTR (40S ribosomal protein S1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=rps1 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.440e-75
Identity = 144/227 (63.44%), Postives = 174/227 (76.65%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGD-YXEDVGVKVDRPADEPMLK 825
            DWY+IKAP  F VR+VGKTL  RT G   A+  L  R+FEVSL DL  +E+HA+RK+ L  ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V VKTTD++ LRLFCI FTKR PNQVK+T YAQ+SQIR IR+KM EIM   A+SC L  L +K I EVIGREIEKAT  IYPLQNV +RKVK+LKAP+FDLG L+ +HG+   +D G KV+R   E +L+
Sbjct:   27 DWYNIKAPGTFAVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDDYLLRLFCIAFTKRRPNQVKKTTYAQSSQIRAIRKKMVEIMARDASSCTLAQLTQKLIPEVIGREIEKATQGIYPLQNVHVRKVKLLKAPKFDLGALLGLHGESSQDDSGQKVEREFKETVLE 253          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_TORRU (40S ribosomal protein S3a OS=Tortula ruralis GN=RPS3A PE=2 SV=3)

HSP 1 Score: 278.485 bits (711), Expect = 3.692e-74
Identity = 148/217 (68.20%), Postives = 171/217 (78.80%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEK-ATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVGVKV 795
            DWYDIKAP   R    G+    RT GT IAS GL  RVFEVSL DL N+E+ A+RKI L AEDVQGKNVLTNFWGM+FTTDKLRSLVRKW +LI+A+VDVKTTDN+ +R+FCI FTK+ PN   R  YAQ+SQI  IRRKMREIMV +A +CDLK LV KFI EVIG+EI++  +  IYPLQ+ FIRKVKILKAP+FDL KLM VHGDY E+VG K+
Sbjct:   28 DWYDIKAPPRSRRARSGRRCH-RTAGTKIASDGLNFRVFEVSLADLQNDEDQAFRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCIAFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 241          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_ASPCL (40S ribosomal protein S1 OS=Aspergillus clavatus GN=rps1 PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.832e-73
Identity = 141/227 (62.11%), Postives = 174/227 (76.65%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGD-YXEDVGVKVDRPADEPMLK 825
            D Y +KAPS F++R+VGKTL  RT G   A+  L  R+FEVSL DL N+E+HA+RK+ L  +++QGKN LTNF G++FTTDKLRSLVRKW +LIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+KM EIM  +AASC L  L  K I EVIGREIEKAT  IYPLQNV IRKVK+LKAP+FDLG L+ +HG+   +D G KV+R   E +L+
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREAASCSLAQLTHKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLE 254          
The following BLAST results are available for this feature:
BLAST of EY711078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
RS3A2_VITVI1.492e-9183.1740S ribosomal protein S3a-2 OS=Vitis vinifera GN=G... [more]
RS3A_CHLRE3.803e-8770.9140S ribosomal protein S3a OS=Chlamydomonas reinhar... [more]
RS3A_OSTLU2.551e-8369.5140S ribosomal protein S3a OS=Ostreococcus lucimari... [more]
RS3A_LENED2.919e-7965.0240S ribosomal protein S1 OS=Lentinula edodes GN=RP... [more]
RS3A_LACBS5.504e-7862.3340S ribosomal protein S1 OS=Laccaria bicolor (stra... [more]
RS3A_COPC72.092e-7762.7840S ribosomal protein S1 OS=Coprinopsis cinerea (s... [more]
RS3A_POSPM6.086e-7764.1340S ribosomal protein S1 OS=Postia placenta (strai... [more]
RS3A_PYRTR7.440e-7563.4440S ribosomal protein S1 OS=Pyrenophora tritici-re... [more]
RS3A_TORRU3.692e-7468.2040S ribosomal protein S3a OS=Tortula ruralis GN=RP... [more]
RS3A_ASPCL1.832e-7362.1140S ribosomal protein S1 OS=Aspergillus clavatus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711078 ID=EY711078; Name=EY711078; organism=Citrus sinensis; type=EST; length=907bp
CGGACGCGTGGTCCAACTAAGACTACGTAGCATCGGAGCCGTCTCTTGAG
CAGCAGCTGCACAAACATGGCTGGCGGGAAGAACAAGAGGATTTCAAAGG
GGAAGAAAGGAGGCTAGAAGAAGGCTGCTGATCCGCTTGCCAAGAAGGAC
TGGTATGATATCAAGGCTCCATCTTGTTTCCGCGTCAGAAATGTTGGCAA
GACTCTTGGTACCCGGACTCAGGGGACCAATATTGCATCAAAAGGGCTCT
GGCACAGAGTGTTTGAGGTATCACTAGGTGATCTTCTCAATGAAGAAGAG
CATGCTTACAGGAAGATCATACTGACAGCTGAAGATGTCCAAGGGAAGAA
TGTTTTGACTAACTTCTGGGGCATGAATTTCACTACAGACAAGCTGAGGT
CTTTGGTTAGGAAGTGGCATACCTTGATTGAAGCTTACGTGGATGTCAAG
ACCACTGATAACTTCACATTGAGGTTGTTCTGCATTGGATTCACCAAGAG
ACTTCCAAACCAGGTTAAGAGGACTTGCTACGCACAGACCAGCCAGATTA
GACAGATTCGCCGCAAGATGAGGGAGATCATGGTTGCTCAGGCAGCATCT
TGTGATCTTAAGAGCTTGGTCGAAAAGTTCATTGCTGAAGTGATTGGAAG
AGAGATTGAGAAGGCAACGTCAAGCATATACCCCTTACAAAATGTGTTCA
TTCGCAAAGTGAAGATCCTGAAAGCTCCCCAGTTTGATCTTGGAAAATTG
ATGGANGTTCACGGTGATTACTNCGAAGATGTTGGTGTGAAGGTGGATAG
GCCAGCTGATGAGCCCATGCTGAAGCACAACTNGAGTGATTGGAGCTTTG
ACGTGAATGAGAAAATTTTCTAGTTTTGTTTTCCTACTATCTGATCTGGG
CAGTTTG
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