EY711078

Overview
NameEY711078
Unique NameEY711078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_ANODA (40S ribosomal protein S3a OS=Anopheles darlingi PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 5.002e-63
Identity = 127/230 (55.22%), Postives = 160/230 (69.57%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEE--EHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDV---------GVKVDRP 804
            DWYD+KAP+ F+ R VGKTL  RTQGT IAS GL  RVFEVSL DL NE+  E ++RK  L AE V G++VL NF GM+ TTDKLRS+V+KW TLIE  VDVKTTD + LR+FCIGFT +     ++TCYAQ SQI+ IR++M  I+  +  + DLK +VEK + + I ++IEKA   +YPL +VFIRKVK+LK P+FDL  L+ +HGD              GV VDRP
Sbjct:   29 DWYDVKAPNMFKNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNEQDAERSFRKFKLIAESVNGRDVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFCIGFTIKDSVSQRKTCYAQHSQIKNIRQRMTTIIKREIINSDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVFIRKVKVLKKPRFDLSSLLELHGDGGGKAAEVSTGAASGVVVDRP 258          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_THEPA (40S ribosomal protein S3a OS=Theileria parva GN=TP03_0697 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.532e-63
Identity = 119/213 (55.87%), Postives = 158/213 (74.18%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVG 786
            +WY++KAP  F VRN G+TL T+T GT +A+ GL  RVFE+SL DL  +E+ AYRKI L+ EDVQG+N LT+F G + T DKL SL+RK ++LIEA+ DVKT D + LRLFC+G+TKR P Q+K TCY +TS++R I +KM  +M  +A++  LK LV+K I E IG+EIEKA  SI+PLQNV +RK+K+LK P+FDL KLM  H    ++ G
Sbjct:   28 EWYNLKAPVTFNVRNFGQTLVTKTVGTKLATDGLKGRVFEMSLADLNADEDQAYRKIKLSCEDVQGRNCLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLRLFCVGYTKRRPGQLKSTCYVRTSKVRLIHKKMVSVMTNEASNSTLKELVKKVIPESIGKEIEKACKSIFPLQNVLVRKIKVLKKPKFDLTKLMESHNYSGDEEG 240          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_CANGA (40S ribosomal protein S1 OS=Candida glabrata GN=RPS1 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.114e-62
Identity = 124/223 (55.61%), Postives = 156/223 (69.96%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGD-YXEDVGVKVDRPADE 813
            +WYDIKAPS F  RNVGKTL  ++ G   AS  L  RV EV L DL   E+H++RK+ L  +DVQGKN+LTNF GM+FT DKLRS+VRKW TLIEA V VKT+D + +R+F I FT++  NQVKRT YAQ+S IR IR+ + +I+  + ++  L     K I EVI +EIE AT  I+PLQNV IRKVK+LK P+FDLG LM +HG+   E+ G KV    DE
Sbjct:   28 EWYDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDDVQGKNLLTNFHGMDFTADKLRSMVRKWQTLIEANVTVKTSDEYIIRVFAIAFTRKQSNQVKRTAYAQSSHIRAIRKVISDILTREVSNSTLAQFTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSAEEKGKKVSGFKDE 250          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.901e-62
Identity = 125/223 (56.05%), Postives = 157/223 (70.40%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGD-YXEDVGVKVDRPADE 813
            +W+DIKAPS F  RNVGKTL  ++ G   A+  L  RV EV L DL   E+H++RKI L  ++VQGKN+LTNF GM+FTTDK+RS+VRKW TLIEA V VKT+D++ LR+F I FT++  NQVKRT YAQ+S IR IR+ + EI+  +     L  L  K I EVI +EIE AT  I+PLQNV IRKVK+LK P+FDLG LM +HG+   E+ G KV    DE
Sbjct:   28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKWQTLIEANVTVKTSDDYVLRVFAIAFTRKQSNQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGSLMALHGEGSGEEKGKKVSGFKDE 250          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_THEAN (40S ribosomal protein S3a OS=Theileria annulata GN=TA17795 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.482e-62
Identity = 118/213 (55.40%), Postives = 158/213 (74.18%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVG 786
            +WY++KAP  F VRN G+TL T+T GT +A+ GL  RVFE+SL DL  +E+ AYRKI L+ EDVQG+N LT+F G + T DKL SL+RK ++LIEA+ DVKT D + LR+FC+G+TKR P Q+K TCY ++S++R I +KM  +M  +A++  LK LV+K I E IG+EIEKA  SI+PLQNV +RK+K+LK P+FDL KLM  H    E+ G
Sbjct:   28 EWYNLKAPVTFNVRNFGQTLVTKTIGTKLATDGLKGRVFEMSLADLNADEDQAYRKIKLSCEDVQGRNCLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLRMFCVGYTKRRPGQLKSTCYVRSSKVRLIHKKMVAVMTNEASNSTLKELVKKVIPESIGKEIEKACKSIFPLQNVLVRKIKVLKKPKFDLTKLMESHNYSGEEEG 240          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_LACTC (40S ribosomal protein S1 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.482e-62
Identity = 123/217 (56.68%), Postives = 153/217 (70.51%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGD-YXEDVGVKV 795
            +WYDIKAPS F  RNVGKTL  ++ G   AS  L  RV EV L DL   E+H++RK+ L  ++VQGKN+LTNF G++ TTDK RS+VRKW TLIEA V VKT D + LR+F I FT+R PNQVK+ CYAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQNV IRKVK+LK P+FDLG LM +HG+   E+ G KV
Sbjct:   28 EWYDIKAPSTFENRNVGKTLVNKSTGLKNASDYLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDLTTDKYRSMVRKWQTLIEANVTVKTADEYVLRVFAIAFTRRQPNQVKKACYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGEASGEEKGKKV 244          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMA (40S ribosomal protein S3a OS=Bombyx mandarina PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.242e-62
Identity = 123/224 (54.91%), Postives = 159/224 (70.98%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLL--NEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGD---YXEDVGVKVDRP 804
            DWYD+KAPS F  R VG TL  RTQGT IAS+GL  RVFEVSL DL    + E ++RK  L AEDVQG+NVL NF GM+ TTDKLR +V+KW TLIEA +DVKTTD + LR+FCIGFT +     ++TCYAQ +Q+R IR+KM EI+     + +L+ +V K I + I ++IEKA   IYPL++V IRKVK+LK P+F++ KLM +HG+      + G K +RP
Sbjct:   29 DWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKREAGDKSERP 252          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_PLAF7 (40S ribosomal protein S3a OS=Plasmodium falciparum (isolate 3D7) GN=MAL3P7.35 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.234e-62
Identity = 119/217 (54.84%), Postives = 158/217 (72.81%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXEDVGVKVD 798
            +WYD+KAP  F VRN GKTL T+T G  +A+  L  R++EV+L DL N+E+ A++KI L+ + +  ++  T+F G++ T DKL SL+RK +TLIE + DVKT DN+ LR+FCI FTK+  NQ K TCYAQTSQI++IR+KM +IM A+A+   LK LV+KFI E IG+EIEK    IYPLQNV IRKVKILK P+ D+ KLM +H D  E+ G  V+
Sbjct:   28 EWYDLKAPKMFLVRNFGKTLVTKTIGKKLATDSLKGRIYEVNLADLNNDEDQAHKKIKLSCDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGHTDVKTLDNYHLRMFCIAFTKKRQNQTKSTCYAQTSQIKKIRKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDPKEESGKNVN 244          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_SPOFR (40S ribosomal protein S3a OS=Spodoptera frugiperda PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.222e-62
Identity = 122/225 (54.22%), Postives = 159/225 (70.67%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLL--NEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGDYXE----DVGVKVDRP 804
            DWYD+KAPS F  R VG TL  RTQGT IAS+GL  RVFEVSL DL    + E ++RK  L AEDVQG+NVL NF GM+ TTDKLR +V+KW TL+EA +DVKTTD + LR+FCIGFT +     ++TCYAQ +Q+R IR+KM EI+     + +L+ +V K I + I ++IEKA   IYPL++V IRKVK+LK P+F++ KLM +HG+       + G K +RP
Sbjct:   29 DWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLVEANIDVKTTDGYLLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEAGDKSERP 253          
BLAST of EY711078 vs. ExPASy Swiss-Prot
Match: RS3A_ASHGO (40S ribosomal protein S1 OS=Ashbya gossypii GN=RPS1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.222e-62
Identity = 122/217 (56.22%), Postives = 155/217 (71.43%), Query Frame = 1
Query:  148 DWYDIKAPSCFRVRNVGKTLGTRTQGTNIASKGLWHRVFEVSLGDLLNEEEHAYRKIILTAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPQFDLGKLMXVHGD-YXEDVGVKV 795
            +WYDIKAPS F  RNVGKTL  ++ G   A+  L  RV EV L DL   E+H++RK+ L  ++VQGKN+LTNF G++FTTDKLRS+VRKW TLIEA V VKT D++ LR+F I FT+R  NQ+K+T YAQ+S IR IR+ + EI+  +  +  L  L  K I EVI +EIE AT  I+PLQNV IRKVK+LK P+FDLG LM +HG+   E+ G KV
Sbjct:   28 EWYDIKAPSTFENRNVGKTLVNKSTGLKNAADFLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIAFTRRQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFDLGALMTLHGESSGEEKGKKV 244          
The following BLAST results are available for this feature:
BLAST of EY711078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
RS3A_ANODA5.002e-6355.2240S ribosomal protein S3a OS=Anopheles darlingi PE... [more]
RS3A_THEPA6.532e-6355.8740S ribosomal protein S3a OS=Theileria parva GN=TP... [more]
RS3A_CANGA1.114e-6255.6140S ribosomal protein S1 OS=Candida glabrata GN=RP... [more]
RS3A_VANPO1.901e-6256.0540S ribosomal protein S1 OS=Vanderwaltozyma polysp... [more]
RS3A_THEAN2.482e-6255.4040S ribosomal protein S3a OS=Theileria annulata GN... [more]
RS3A_LACTC2.482e-6256.6840S ribosomal protein S1 OS=Lachancea thermotolera... [more]
RS3A_BOMMA3.242e-6254.9140S ribosomal protein S3a OS=Bombyx mandarina PE=2... [more]
RS3A_PLAF74.234e-6254.8440S ribosomal protein S3a OS=Plasmodium falciparum... [more]
RS3A_SPOFR7.222e-6254.2240S ribosomal protein S3a OS=Spodoptera frugiperda... [more]
RS3A_ASHGO7.222e-6256.2240S ribosomal protein S1 OS=Ashbya gossypii GN=RPS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E07-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711078 ID=EY711078; Name=EY711078; organism=Citrus sinensis; type=EST; length=907bp
CGGACGCGTGGTCCAACTAAGACTACGTAGCATCGGAGCCGTCTCTTGAG
CAGCAGCTGCACAAACATGGCTGGCGGGAAGAACAAGAGGATTTCAAAGG
GGAAGAAAGGAGGCTAGAAGAAGGCTGCTGATCCGCTTGCCAAGAAGGAC
TGGTATGATATCAAGGCTCCATCTTGTTTCCGCGTCAGAAATGTTGGCAA
GACTCTTGGTACCCGGACTCAGGGGACCAATATTGCATCAAAAGGGCTCT
GGCACAGAGTGTTTGAGGTATCACTAGGTGATCTTCTCAATGAAGAAGAG
CATGCTTACAGGAAGATCATACTGACAGCTGAAGATGTCCAAGGGAAGAA
TGTTTTGACTAACTTCTGGGGCATGAATTTCACTACAGACAAGCTGAGGT
CTTTGGTTAGGAAGTGGCATACCTTGATTGAAGCTTACGTGGATGTCAAG
ACCACTGATAACTTCACATTGAGGTTGTTCTGCATTGGATTCACCAAGAG
ACTTCCAAACCAGGTTAAGAGGACTTGCTACGCACAGACCAGCCAGATTA
GACAGATTCGCCGCAAGATGAGGGAGATCATGGTTGCTCAGGCAGCATCT
TGTGATCTTAAGAGCTTGGTCGAAAAGTTCATTGCTGAAGTGATTGGAAG
AGAGATTGAGAAGGCAACGTCAAGCATATACCCCTTACAAAATGTGTTCA
TTCGCAAAGTGAAGATCCTGAAAGCTCCCCAGTTTGATCTTGGAAAATTG
ATGGANGTTCACGGTGATTACTNCGAAGATGTTGGTGTGAAGGTGGATAG
GCCAGCTGATGAGCCCATGCTGAAGCACAACTNGAGTGATTGGAGCTTTG
ACGTGAATGAGAAAATTTTCTAGTTTTGTTTTCCTACTATCTGATCTGGG
CAGTTTG
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