EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNP6 (50S ribosomal protein L6 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplF PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 85/170 (50.00%), Postives = 119/170 (70.00%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ V++ + G+ + VKGP GELS P V V +ED + V + E+R A Q HGL RTL N+V GV GF+K+L+++GVGYRA ++G L+L++G+S+PV++ P+GI+ VE NT + VSG K +G AA IR RPPEPYKGKG++Y EV+ R Sbjct: 2 SRIGKRPIPIPAKVSVAIDGRLVSVKGPKGELSRELPSGVVVTQEDGNIIVSRADESRLARQRHGLSRTLVANLVEGVDSGFQKRLEIIGVGYRAQVQGTTLILNVGYSNPVQIEPPEGIQFVVENNTNVVVSGISKEVVGNTAARIRAVRPPEPYKGKGIRYAGEVVLR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNE7 (50S ribosomal protein L6 OS=Synechococcus elongatus (strain PCC 7942) GN=rplF PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 85/170 (50.00%), Postives = 119/170 (70.00%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ V++ + G+ + VKGP GELS P V V +ED + V + E+R A Q HGL RTL N+V GV GF+K+L+++GVGYRA ++G L+L++G+S+PV++ P+GI+ VE NT + VSG K +G AA IR RPPEPYKGKG++Y EV+ R Sbjct: 2 SRIGKRPIPIPAKVSVAIDGRLVSVKGPKGELSRELPSGVVVTQEDGNIIVSRADESRLARQRHGLSRTLVANLVEGVDSGFQKRLEIIGVGYRAQVQGTTLILNVGYSNPVQIEPPEGIQFVVENNTNVVVSGISKEVVGNTAARIRAVRPPEPYKGKGIRYAGEVVLR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_RHOPS (50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplF PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 89/170 (52.35%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VPS VT T+ GQ +K+KGP G+L V +V V ED ++V ET RA ++G R N+V GV+KGFEKKL++ GVGYRA+L+G+ L L+LG+SH V IP+GI + V + T I V G D +GQ AA IR +RPPEPYKGKGV+Y DE I R Sbjct: 2 SRVGKKPVTVPSGVTATVEGQTVKMKGPKGQLQFVVHDDVDVKFEDGSVKVAPRFETNRAQALYGTARAQIANLVDGVTKGFEKKLEITGVGYRASLQGKKLQLALGYSHDVIYDIPEGITITVPKPTEINVVGIDSQKVGQVAAEIRDYRPPEPYKGKGVRYSDEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PROMM (50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplF PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 88/170 (51.76%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK PI +P V +TL G + VKGP GELS P V V + ++ + V T + R++ + HGL R+L NMV GVSKG+ +KL+++GVG RA ++G+ LV+S GFSHPV M P+G+ VE NT +TVSG DK +G AA IR RPPEPYKGKG++Y E I R Sbjct: 2 SRIGKNPIPIPDKVAVTLDGLAVSVKGPKGELSRTLPEGVSVSQVENTIVVTPTSQKRKSRERHGLCRSLVANMVEGVSKGYTRKLELIGVGSRAQVKGKKLVVSAGFSHPVEMDPPEGVTFAVENNTNVTVSGADKELVGNEAAKIRAIRPPEPYKGKGIRYEGERILR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_OCEIH (50S ribosomal protein L6 OS=Oceanobacillus iheyensis GN=rplF PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 82/170 (48.24%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+G +P+E+P V + L + VKGP GELS ++K++ ED+ L V + + + +HG R+L +NMV+GVSKGFEK L+++GVGYRA +G V++ G+SHPV + DGI++ V +NT+ITV G DK +G AA+IR RPPEPYKGKG++Y DE +RR Sbjct: 2 SRVGLKPVEIPEGVELKLDNNTVTVKGPKGELSRELHPDMKINIEDNVLTVERPSDHKEHRALHGTTRSLINNMVIGVSKGFEKSLEIIGVGYRAQKQGDKTVINAGYSHPVELEAIDGIEIEVPKNTQITVKGIDKELVGAIAANIRAIRPPEPYKGKGIRYTDEYVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CAUCR (50S ribosomal protein L6 OS=Caulobacter crescentus GN=rplF PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ + +PS V +TL GQ + VKGP G+LS EV+V +E + L + V+T+RA M GL RTL NMV GV+ GFE+ L++VGVGYRAA++G L L LGFSH V + P G+ V + T I ++G DK A+G+ AA IR+ RPPEPYKGKGV+Y E +RR Sbjct: 2 SRIGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIADEVEVKQEGAELLLAPRVDTKRAKGMWGLSRTLVANMVHGVTVGFEESLELVGVGYRAAMKGTALSLQLGFSHDVDVAAPAGVTFAVPKQTEIKIAGIDKQAVGEIAAKIRRIRPPEPYKGKGVRYAGEKVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CAUCN (50S ribosomal protein L6 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rplF PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ + +PS V +TL GQ + VKGP G+LS EV+V +E + L + V+T+RA M GL RTL NMV GV+ GFE+ L++VGVGYRAA++G L L LGFSH V + P G+ V + T I ++G DK A+G+ AA IR+ RPPEPYKGKGV+Y E +RR Sbjct: 2 SRIGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIADEVEVKQEGAELLLAPRVDTKRAKGMWGLSRTLVANMVHGVTVGFEESLELVGVGYRAAMKGTALSLQLGFSHDVDVAAPAGVTFAVPKQTEIKIAGIDKQAVGEIAAKIRRIRPPEPYKGKGVRYAGEKVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_RHOP2 (50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplF PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43 Identity = 89/170 (52.35%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VPS VT ++ GQ +K+KGP G+L V +V V ED ++V ET RA ++G R N+V GV+KGFEKKL++ GVGYRAAL+G+ L L+LG+SH V IP+GI + V + T I V G D +GQ AA IR +RPPEPYKGKGV+Y DE I R Sbjct: 2 SRVGKKPVTVPSGVTASVEGQTVKMKGPKGQLHFVVHDDVDVKFEDGSVKVAPRFETNRAQALYGTARAQIANLVEGVTKGFEKKLEITGVGYRAALQGKKLQLALGYSHDVIYDIPEGITITVPKPTEINVVGIDSQKVGQVAAEIRDYRPPEPYKGKGVRYSDEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_NITOC (50S ribosomal protein L6 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rplF PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43 Identity = 87/171 (50.88%), Postives = 115/171 (67.25%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQ-DLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRI P+ +P V +TL G D+KVKG G L+ ++V ++ LR +R N + G R L +NMV GVS+GFE++LQ+VGVGYRA L+G+ LVLSLG+SHPV T P+G+ + V T I V GYDK +GQ AA+IR++RPPEPYKGKGV+Y DEV+ R Sbjct: 2 SRIADNPVSIPKGVEVTLSGDNDIKVKGAKGSLAFAIHPLIQVVQDGETLRFSAKSTDKRVNALRGTTRALINNMVQGVSQGFERRLQLVGVGYRAQLQGRKLVLSLGYSHPVEFTAPEGLTIEVPSPTEIIVKGYDKQQVGQAAANIRRFRPPEPYKGKGVRYADEVVVR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SALAI (50S ribosomal protein L6 OS=Salinispora arenicola (strain CNS-205) GN=rplF PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.007e-43 Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIG++ I VP+ V +T+ GQ +KVKGP GELS + V+R ED L V + + R+A ++HGL RTL NM+VGV++G+ K L++ G GYR +G+ L +LGFSHPV + P+GI +VE+ T V+G +K +G+ AA+IRK RPPEPYKGKGVKY EVIRR Sbjct: 2 SRIGRKSIPVPAGVDVTIDGQTVKVKGPKGELSHTLAEPITVERAEDGQLNVARPNDERKAKELHGLSRTLVANMIVGVTEGYRKSLEIAGTGYRVTAKGKDLEFALGFSHPVTVVAPEGITFSVEKPTLFHVAGINKQLVGEVAANIRKIRPPEPYKGKGVKYQGEVIRR 172 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |