EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_YERPN (50S ribosomal protein L6 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 78/169 (46.15%), Postives = 106/169 (62.72%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SR+ K P+ +P+ V + L GQ + +KG GEL+ V+V +E++ L G R L ++MV+GV++GF KKLQ+VGVGYRAA++G V+ L+LGFSHPV +P GI T I + G DK IGQ AA +R +R PEPYKGKGV+Y DEV+R Sbjct: 2 SRVAKAPVVIPAGVEVKLNGQVISIKGKNGELTRTVHSAVEVKQEENTLTFAPREGAVDGWAQAGTTRALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVVNLALGFSHPVDHELPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVR 170
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_YERPG (50S ribosomal protein L6 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 78/169 (46.15%), Postives = 106/169 (62.72%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SR+ K P+ +P+ V + L GQ + +KG GEL+ V+V +E++ L G R L ++MV+GV++GF KKLQ+VGVGYRAA++G V+ L+LGFSHPV +P GI T I + G DK IGQ AA +R +R PEPYKGKGV+Y DEV+R Sbjct: 2 SRVAKAPVVIPAGVEVKLNGQVISIKGKNGELTRTVHSAVEVKQEENTLTFAPREGAVDGWAQAGTTRALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVVNLALGFSHPVDHELPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVR 170
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_YERPE (50S ribosomal protein L6 OS=Yersinia pestis GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 78/169 (46.15%), Postives = 106/169 (62.72%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SR+ K P+ +P+ V + L GQ + +KG GEL+ V+V +E++ L G R L ++MV+GV++GF KKLQ+VGVGYRAA++G V+ L+LGFSHPV +P GI T I + G DK IGQ AA +R +R PEPYKGKGV+Y DEV+R Sbjct: 2 SRVAKAPVVIPAGVEVKLNGQVISIKGKNGELTRTVHSAVEVKQEENTLTFAPREGAVDGWAQAGTTRALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVVNLALGFSHPVDHELPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVR 170
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_YERPB (50S ribosomal protein L6 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 78/169 (46.15%), Postives = 106/169 (62.72%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SR+ K P+ +P+ V + L GQ + +KG GEL+ V+V +E++ L G R L ++MV+GV++GF KKLQ+VGVGYRAA++G V+ L+LGFSHPV +P GI T I + G DK IGQ AA +R +R PEPYKGKGV+Y DEV+R Sbjct: 2 SRVAKAPVVIPAGVEVKLNGQVISIKGKNGELTRTVHSAVEVKQEENTLTFAPREGAVDGWAQAGTTRALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVVNLALGFSHPVDHELPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVR 170
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_YERPA (50S ribosomal protein L6 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 78/169 (46.15%), Postives = 106/169 (62.72%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SR+ K P+ +P+ V + L GQ + +KG GEL+ V+V +E++ L G R L ++MV+GV++GF KKLQ+VGVGYRAA++G V+ L+LGFSHPV +P GI T I + G DK IGQ AA +R +R PEPYKGKGV+Y DEV+R Sbjct: 2 SRVAKAPVVIPAGVEVKLNGQVISIKGKNGELTRTVHSAVEVKQEENTLTFAPREGAVDGWAQAGTTRALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVVNLALGFSHPVDHELPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVR 170
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_YERP3 (50S ribosomal protein L6 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 78/169 (46.15%), Postives = 106/169 (62.72%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SR+ K P+ +P+ V + L GQ + +KG GEL+ V+V +E++ L G R L ++MV+GV++GF KKLQ+VGVGYRAA++G V+ L+LGFSHPV +P GI T I + G DK IGQ AA +R +R PEPYKGKGV+Y DEV+R Sbjct: 2 SRVAKAPVVIPAGVEVKLNGQVISIKGKNGELTRTVHSAVEVKQEENTLTFAPREGAVDGWAQAGTTRALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVVNLALGFSHPVDHELPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVR 170
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_THESQ (50S ribosomal protein L6 OS=Thermotoga sp. (strain RQ2) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 77/177 (43.50%), Postives = 115/177 (64.97%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVR-------KTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+ K+PI +P VT+ + +KVKGP GELS + VK++ E + + VR + + R+ G + +L NMVVGV++G++K+L++VG+GYRA L+G +V++LG++HPV IP +K+ V RI VSG DK +GQ AA IR +RPP Y GKG++YV EV+R+ Sbjct: 2 SRLAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNENQIIRKSDWRKIKMFQGTYWSLIRNMVVGVTEGYKKELEIVGIGYRAQLQGNTVVMNLGYAHPVVYEIPSDVKIEVPAPNRIVVSGIDKQRVGQVAAEIRAFRPPNVYTGKGIRYVGEVVRQ 178
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_THEP1 (50S ribosomal protein L6 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 77/177 (43.50%), Postives = 115/177 (64.97%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVR-------KTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+ K+PI +P VT+ + +KVKGP GELS + VK++ E + + VR + + R+ G + +L NMVVGV++G++K+L++VG+GYRA L+G +V++LG++HPV IP +K+ V RI VSG DK +GQ AA IR +RPP Y GKG++YV EV+R+ Sbjct: 2 SRLAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNENQIIRKSDWRKIKMFQGTYWSLIRNMVVGVTEGYKKELEIVGIGYRAQLQGNTVVMNLGYAHPVVYEIPSDVKIEVPAPNRIVVSGIDKQRVGQVAAEIRAFRPPNVYTGKGIRYVGEVVRQ 178
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_THEM4 (50S ribosomal protein L6 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 73/176 (41.48%), Postives = 112/176 (63.64%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVE-------TRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SRI +PI +P+ V + + KVKGP GELS + +K++ ++ + V+ +E ++ G + L +NM++GV++GF K+L+++G+GYRA L+G+ LV++LG++HPV M IP + V V RI VSG DK +GQ AA IR+WR P Y GKG++YV EV+R Sbjct: 2 SRIANKPIVIPNGVEVKVENNVFKVKGPKGELSQEFLPYIKIEVNENEIYVKPNLEFMKRKSDLKKMKMFTGTYWRLFNNMIIGVTQGFRKELEIIGIGYRAQLQGKKLVMNLGYAHPVEMEIPSDVAVEVPSPNRIVVSGIDKQRVGQVAADIRRWREPNVYSGKGIRYVGEVVR 177
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SULNB (50S ribosomal protein L6 OS=Sulfurovum sp. (strain NBC37-1) GN=rplF PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 81/170 (47.65%), Postives = 111/170 (65.29%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+ VPS + ++L G L K E L V ++ + S + + + ++ G +R L +N++VG+ KG+ K L++ GVGYRAA+EG+ L L LGFSH V IP+G+ + V++N ITVSG DK A+GQ AA IR +RPPEPYKGKGVKY DEVI R Sbjct: 2 SRIGKRPVTVPSGIEVSLDGTTLVAKKGNLEKRLETHGRVGINIDGSEVTFTRVGDEKQDAAFWGTYRALFNNIMVGLDKGYSKSLEINGVGYRAAVEGKTLKLQLGFSHDVNFEIPEGLDIKVDKNI-ITVSGTDKQAVGQAAAEIRAYRPPEPYKGKGVKYTDEVIIR 170 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |