EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_RHOP5 (50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplF PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.007e-43 Identity = 87/170 (51.18%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VPS VT ++ GQ +KVKGP G+L V +V V E+ + V+ ET RA ++G R N+V GV+KGFEKKL++ GVGYRA L+G+ L L+LG+SH V TIP+GI + V + T I + G D +GQ AA IR +RPPEPYKGKGV+Y +E I R Sbjct: 2 SRVGKKPVTVPSGVTASVEGQTVKVKGPKGQLQFVVHDDVDVKLENGEVTVKPRYETNRARALYGTARAQVANLVEGVTKGFEKKLEITGVGYRATLQGKNLQLALGYSHDVVYTIPEGIAITVPKPTEINIVGIDSQVVGQVAAEIRSYRPPEPYKGKGVRYANEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PHEZH (50S ribosomal protein L6 OS=Phenylobacterium zucineum (strain HLK1) GN=rplF PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.007e-43 Identity = 87/170 (51.18%), Postives = 119/170 (70.00%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ + VPS VT+T+ GQ + VKGP G+L+ E++V +E + + + K E+ RA M GL RTL +NMVVGV++G+E+ L++VGVGYRAA++GQ L + LGFSH V + P GI + T I +SG DK +G+ AA IR+ RPPEPYKGKGV+Y E +RR Sbjct: 2 SRIGKKAVAVPSGVTVTIDGQTVTVKGPKGQLAWTVAEEIEVRQEGAEILLSKRDESTRAQAMWGLSRTLVNNMVVGVTQGYEQTLELVGVGYRAAMKGQALSMQLGFSHDVDVAPPAGITFATPKQTEIKISGIDKQLVGETAARIRRLRPPEPYKGKGVRYAGENVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PARUW (50S ribosomal protein L6 OS=Protochlamydia amoebophila (strain UWE25) GN=rplF PE=3 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.007e-43 Identity = 84/170 (49.41%), Postives = 118/170 (69.41%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR GK PI +P+ V + + ++ VKGP G L+ V V+ E + + V E + HGL+RTL NMVVG ++GFEKKL+M+GVGYRAA++G +L L LGFSHP ++ IP G+ V V++NT IT+SG+DK +GQFAA++R RPPEPY+GKG++Y E +R+ Sbjct: 2 SRKGKLPISLPNGVEVKVSNTEVAVKGPKGALTQKLIPGVNVNVEGNEVLVSLADEEAKLAHFHGLYRTLIHNMVVGTTEGFEKKLEMIGVGYRAAVQGDLLDLQLGFSHPCKLPIPKGLAVKVDKNTLITISGFDKHLVGQFAATVRSQRPPEPYQGKGIRYAGEFVRK 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_DESAD (50S ribosomal protein L6 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplF PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.007e-43 Identity = 81/170 (47.65%), Postives = 120/170 (70.59%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI++PS V +T+G + VKGP G ++ V D+ + V+++ ++R+ HGL R+L N + GVSKGF K L++VGVGY+ ++G+ +VL++GFSHPV +P GI+ + E NT++T+SG DK +G+ AA +R+ RPPEPYKGKG+KY+DE IRR Sbjct: 2 SRIGKKPIDIPSGVEVTVGADVVSVKGPKGTITTPVHPMVSFTVADNAVEVKRSGDSRQERAQHGLHRSLLANCIEGVSKGFSKTLEVVGVGYKVNVQGKNIVLNVGFSHPVNYELPAGIEASAEGNTKLTISGVDKQLVGEVAAQLRRVRPPEPYKGKGIKYIDEQIRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PROMA (50S ribosomal protein L6 OS=Prochlorococcus marinus GN=rplF PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 87/170 (51.18%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI VP V +TL G + VKGP GEL+ P V +D+ D + V E R++ + HGL RTL NM+ GV+ G+ K+L++VGVG RA ++G+ LV+S G+SHPV + P+GI VE NT + VSG DK +G AA IR RPPEPYKGKG+KY+ E I R Sbjct: 2 SRIGKKPIPVPEKVAVTLDGLLVTVKGPKGELTRTLPEGVTIDQTDGLIIVSADSEKRKSRERHGLSRTLVANMIEGVNNGYSKQLEIVGVGSRAQVKGKTLVVSAGYSHPVEVIPPEGITFKVENNTNVLVSGIDKELVGNEAAKIRAIRPPEPYKGKGIKYLGERILR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_MOOTA (50S ribosomal protein L6 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplF PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 83/170 (48.82%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+++P+ V + + G + VKGP G+L+ +P E+ + RE L+V + + + +HGL R L NMV GV++GFEK L++VGVGYRAA +G LVLS+G+SHPV M +G+++ V ++ V G DK A+G AA IR RPPEPYKGKG+KY E IRR Sbjct: 2 SRIGKKPVKIPAGVEVNIEGNTVTVKGPKGKLTRQFPAEITISREGEELQVSRPSDAKPHRALHGLSRALLQNMVDGVTRGFEKGLELVGVGYRAAKQGNKLVLSVGYSHPVEMVPGEGLEIEVPAPNKVIVKGIDKEAVGALAAKIRDVRPPEPYKGKGIKYEGEYIRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNP2 (50S ribosomal protein L6 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplF PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.130e-43 Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNV-EENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P VT+TL G ++ VKGP G L P +V V +ED+ + V +R A + HGL RTL NM+ GVS+G+ K+L+++GVGYRA ++G L L++G+S PV M +P+G+ + E+NT++ +SG DK +G AA +R RPPEPYKGKG++Y E IRR Sbjct: 2 SRIGKKPIPIPDKVTVTLNGANVAVKGPKGSLERTLPEKVTVTQEDNTIVVSPVDNSRTARERHGLCRTLVANMIEGVSQGYSKQLEIIGVGYRAQVQGNKLTLNVGYSKPVEMQMPEGVTAAMGEKNTQVIISGIDKEVVGNTAAKVRAVRPPEPYKGKGIRYQGEYIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SALTO (50S ribosomal protein L6 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rplF PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.130e-43 Identity = 87/171 (50.88%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIG++ I VP+ V +T+ GQ + VKGP GELS + +DR ED L V + + R+A ++HGL RTL NM+VGV++G+ K L++ G GYR +G+ L +LGFSHPV + P+GI +VE+ T V+G +K +G+ AA+IRK RPPEPYKGKGVKY EVIRR Sbjct: 2 SRIGRKSIPVPTGVDVTIAGQTVTVKGPKGELSHTIAEPITIDRAEDGQLNVARPNDERKAKELHGLSRTLVANMIVGVTEGYRKSLEIAGTGYRVTAKGKDLEFALGFSHPVTVVAPEGITFSVEKPTLFHVAGINKQLVGEVAANIRKIRPPEPYKGKGVKYQGEVIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_RHOPB (50S ribosomal protein L6 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplF PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.130e-43 Identity = 87/170 (51.18%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VPS VT ++ GQ + +KGP G+L + +V+V E+ + V+ VET RA ++G R N++ GV+KGFEKKL + GVGYRAAL+G+ L L+LG+SH V IPDGI + V + T I +SG D +GQ AA IR +RPPEPYKGKGV+Y DE I R Sbjct: 2 SRVGKKPVVVPSGVTASVQGQIVTMKGPKGQLQFIVHDDVEVQFENGSVTVKPRVETNRARALYGTARAQVANLLEGVTKGFEKKLDITGVGYRAALQGKKLQLALGYSHDVVYDIPDGITITVPKPTEIFISGNDSQRVGQVAAEIRSYRPPEPYKGKGVRYSDEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_LISW6 (50S ribosomal protein L6 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplF PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.700e-43 Identity = 80/170 (47.06%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ I +P+ VT+TL G VKGP GEL + E+ ++ E + + V + + + +HG R + +NMVVGVS+G+EKKL+++GVGYRA +G LVL++G+SHPV P G+++ V NT++ V GY+K +G+ AA+IR RPPEPYKGKG++Y E +RR Sbjct: 2 SRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITINIEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDKLVLNVGYSHPVEFVAPKGVEIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGKGIRYEGEHVRR 171 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |