EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_LISIN (50S ribosomal protein L6 OS=Listeria innocua GN=rplF PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.700e-43 Identity = 80/170 (47.06%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ I +P+ VT+TL G VKGP GEL + E+ ++ E + + V + + + +HG R + +NMVVGVS+G+EKKL+++GVGYRA +G LVL++G+SHPV P G+++ V NT++ V GY+K +G+ AA+IR RPPEPYKGKG++Y E +RR Sbjct: 2 SRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITINIEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDKLVLNVGYSHPVEFVAPKGVEIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGKGIRYEGEHVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RK6_GRATL (50S ribosomal protein L6, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl6 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.700e-43 Identity = 83/170 (48.82%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPR--EVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVI 521 SRIGK+PI +P N+ IT+ +++++GP GELS P+ ++K D +++ L + KT + + A ++HGL RTL +NM++GVS+GFEKKLQ+ GVGYR+ L+G L+L++G+SH V + P I + VE NT IT+ G K +G+ AA IR+ RPPEPYKGKG++Y++E I Sbjct: 2 SRIGKKPINLPQNINITIIENNVQIQGPKGELSYKIPKLIQIKQDTKNNKLFLYKTEDNKEAQKLHGLCRTLINNMIIGVSQGFEKKLQIQGVGYRSQLDGDNLLLNVGYSHTVIVKPPKNIILEVENNTSITIKGIQKEQVGEIAAQIRRIRPPEPYKGKGIRYLNETI 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_RHOCS (50S ribosomal protein L6 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplF PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.750e-43 Identity = 88/170 (51.76%), Postives = 119/170 (70.00%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK P+ VP+ VT+T+ GQ+L KG LG+LSL ++ V ED + V+ ET+RA Q RTL N+V GV+ GF K L++ GVGY+AA++G+ LVL+LG+SH +R IP+GI + ++ T ++VSG DK +GQ AA IR +R PEPYKGKGVKY +EVI R Sbjct: 2 SRIGKHPVPVPAGVTVTVAGQNLTAKGKLGQLSLSLIDDIAVSMEDGKVVVQPRTETKRARQNWATARTLVFNLVKGVNDGFTKNLEINGVGYKAAVQGKDLVLNLGYSHEIRYPIPEGITIKCDKPTSVSVSGTDKQQVGQVAAEIRAFRGPEPYKGKGVKYENEVIIR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CARHZ (50S ribosomal protein L6 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplF PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.750e-43 Identity = 83/170 (48.82%), Postives = 118/170 (69.41%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIG++PI VP V + + G + VKGP G L+ + ++K+ + S + V + + + +HGL RTL +NM+VGV+ G++K L++VGVGYRAA +G+ LVL++G+SHPV M P+GI++ V +I V G DK +G FAA+IR R PEPYKGKG+KY DEVIRR Sbjct: 2 SRIGRKPIPVPQGVEVKVEGTTVTVKGPKGSLTREFHPDMKITFDGSQILVERPSDEKEHKALHGLTRTLINNMIVGVTNGYQKSLELVGVGYRAAKQGRKLVLTVGYSHPVEMDPPEGIEIEVPAQNQIIVKGIDKELVGNFAATIRAVREPEPYKGKGIKYTDEVIRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNWW (50S ribosomal protein L6 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rplF PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42 Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ V +++ + VKGP G L P + V +E + L V++ + ++ MHGL R L NMV GVS GFEKKL++VGVGYRA ++G+ LV+S+GFSHPV + P+GI+ V TRITV G DK +G AA IR R PEPYKGKG+KY +EVIRR Sbjct: 2 SRIGKKPISLPAGVEVSIKDNAISVKGPKGVLEWALPEGITVVQEGNELVVKRPSDIKQHRAMHGLSRALIANMVQGVSAGFEKKLELVGVGYRAQMQGKKLVISIGFSHPVEVEPPEGIEFEVPAVTRITVKGIDKQLVGNTAAHIRAIRKPEPYKGKGIKYENEVIRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_NATTJ (50S ribosomal protein L6 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rplF PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42 Identity = 82/170 (48.24%), Postives = 120/170 (70.59%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PIE+P +V I++ ++ VKGP GELS V + + ++ E+ L V++ ++ +HGL R+L NMV GV+ GFE+ L++VGVGYRA ++G+ LVL++G+SHPV + P+G+++ V +N +I V G DK +GQ AA IR R PEPYKGKG+KY +E I R Sbjct: 2 SRIGKKPIEIPDSVDISINNNEVTVKGPKGELSQVVDQSIILEEEEGQLLVKRPTDSNHHKSLHGLSRSLIANMVEGVTNGFERHLEIVGVGYRAQMQGKNLVLNVGYSHPVTIEPPEGVEIEVPKNNQIIVKGTDKEVVGQVAARIRAVRKPEPYKGKGIKYAEEQIIR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_LISMF (50S ribosomal protein L6 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplF PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42 Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ I +P+ VT+TL G VKGP GEL + E+ ++ E + + V + + + +HG R + +NMVVGVS+G+EKKL+++GVGYRA +G LVL++G+SHPV P G+ + V NT++ V GY+K +G+ AA+IR RPPEPYKGKG++Y E +RR Sbjct: 2 SRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITINIEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDKLVLNVGYSHPVEFVAPKGVDIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGKGIRYEGEHVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_LISMC (50S ribosomal protein L6 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplF PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42 Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ I +P+ VT+TL G VKGP GEL + E+ ++ E + + V + + + +HG R + +NMVVGVS+G+EKKL+++GVGYRA +G LVL++G+SHPV P G+ + V NT++ V GY+K +G+ AA+IR RPPEPYKGKG++Y E +RR Sbjct: 2 SRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITINIEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDKLVLNVGYSHPVEFVAPKGVDIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGKGIRYEGEHVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_METS4 (50S ribosomal protein L6 OS=Methylobacterium sp. (strain 4-46) GN=rplF PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42 Identity = 88/170 (51.76%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VP+ VT T+ GQ++K+KG GELS P V+V D + V+ +T+ A M GL R N++ GV+KGFEKKL++ GVGYRAA+ G+VL LSLG+SH V IP GI + I V+G DK +GQ AA IR++R PEPYKGKGVKY DE I R Sbjct: 2 SRVGKKPVTVPAGVTATVDGQNVKIKGAKGELSFRVPDLVEVSHADGAISVQPRSQTKEARAMWGLSRAQVANLIEGVTKGFEKKLEINGVGYRAAVAGKVLKLSLGYSHDVEYEIPAGITITTPRPVEIIVAGIDKQRVGQIAAEIREYRGPEPYKGKGVKYSDEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_HERAR (50S ribosomal protein L6 OS=Herminiimonas arsenicoxydans GN=rplF PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42 Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVI 521 SR+GK PI +PS T+ + + VKGPLG LS V+++ L + ++R AN M G R L +NMV GV+KGFEKKL +VGVG+RAA +G L LSLGFSHPV +P GIKV T I + G D+ ++GQ AA +R +RPPEPYKGKGV+Y DEV+ Sbjct: 2 SRVGKMPIALPSGAEATITAEQITVKGPLGSLSQALNGLVQIENASGTLNFKPANDSREANAMSGTLRALVNNMVNGVTKGFEKKLMLVGVGFRAAAQGDKLNLSLGFSHPVVHAMPAGIKVETPTQTEILIKGIDRQSVGQVAAEVRAYRPPEPYKGKGVRYSDEVV 169 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |