EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CAUSK (50S ribosomal protein L6 OS=Caulobacter sp. (strain K31) GN=rplF PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42 Identity = 86/170 (50.59%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ + +PS V ITL GQ + VKGP G+LS E+ + +E S L + +++RA M GL RTL NMV GV+ GFE+ L++VGVGYRAA++G L + LGFSH V + P G+ V + T I ++G DK A+G+ AA IR+ RPPEPYKGKGV+Y E +RR Sbjct: 2 SRIGKKAVAIPSGVNITLDGQTVTVKGPKGQLSWTIAEEITISQEGSDLLLVARDDSKRAKSMWGLSRTLVANMVQGVTTGFEETLELVGVGYRAAMKGDALSIQLGFSHDVNVEAPAGVTFAVPKQTEIKIAGADKQAVGEIAAKIRRIRPPEPYKGKGVRYAGEKVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNPX (50S ribosomal protein L6 OS=Synechococcus sp. (strain WH8102) GN=rplF PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42 Identity = 85/170 (50.00%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK P+ VP VT++L G +KVKGP GEL P V V ++++ + V + R + + HGL RTL NM+ GV+ G+ K L++VGVG RA ++G+ LV+S G+SHPV M P+GI VE NT++ VSG DK +G AA +R RPPEPYKGKG+KY E I R Sbjct: 2 SRIGKNPVPVPDKVTVSLDGLTVKVKGPKGELERTLPDGVSVSQDNNCIVVAPSTSKRFSRERHGLCRTLVANMIEGVNNGYSKSLEIVGVGSRAQVKGKTLVVSAGYSHPVEMEPPEGITFKVENNTKVIVSGIDKELVGNEAAKVRAIRPPEPYKGKGIKYEGERIMR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PROMT (50S ribosomal protein L6 OS=Prochlorococcus marinus (strain NATL2A) GN=rplF PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42 Identity = 85/170 (50.00%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR GK+PI +P V + G + VKGP GEL P V + ++++F+ V+ E R++ +MHGL R+L NMV GVS GF KKL++VGVG RA ++G+ LV+S G+SHPV + P+GI VE NT + V+G DK +G AA IR RPPEPYKGKG+KY E+I R Sbjct: 2 SRTGKKPISLPEKVDVKFEGLSITVKGPKGELKRTLPNGVSLSKDENFIFVKPINEKRQSREMHGLCRSLVANMVEGVSNGFTKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEVVPPEGITFKVENNTNVIVTGPDKELVGNEAAKIRAIRPPEPYKGKGIKYQGELIIR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PROM1 (50S ribosomal protein L6 OS=Prochlorococcus marinus (strain NATL1A) GN=rplF PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42 Identity = 85/170 (50.00%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR GK+PI +P V + G + VKGP GEL P V + ++++F+ V+ E R++ +MHGL R+L NMV GVS GF KKL++VGVG RA ++G+ LV+S G+SHPV + P+GI VE NT + V+G DK +G AA IR RPPEPYKGKG+KY E+I R Sbjct: 2 SRTGKKPISLPEKVDVKFEGLSITVKGPKGELQRTLPNGVSLSKDENFIFVKPINEKRQSREMHGLCRSLVANMVEGVSNGFTKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEVVPPEGITFKVENNTNVIVTGPDKELVGNEAAKIRAIRPPEPYKGKGIKYQGELIIR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_LISMO (50S ribosomal protein L6 OS=Listeria monocytogenes GN=rplF PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42 Identity = 80/170 (47.06%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ I +P+ VT+TL G VKGP GEL + E+ + E + + V + + + +HG R + +NMVVGVS+G+EKKL+++GVGYRA +G LVL++G+SHPV P G+ + V NT++ V GY+K +G+ AA+IR RPPEPYKGKG++Y E +RR Sbjct: 2 SRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITIKIEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDKLVLNVGYSHPVEFVAPKGVDIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGKGIRYEGEHVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_LISMH (50S ribosomal protein L6 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=rplF PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42 Identity = 80/170 (47.06%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+ I +P+ VT+TL G VKGP GEL + E+ + E + + V + + + +HG R + +NMVVGVS+G+EKKL+++GVGYRA +G LVL++G+SHPV P G+ + V NT++ V GY+K +G+ AA+IR RPPEPYKGKG++Y E +RR Sbjct: 2 SRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITIKIEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDKLVLNVGYSHPVEFVAPKGVDIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGKGIRYEGEHVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_IDILO (50S ribosomal protein L6 OS=Idiomarina loihiensis GN=rplF PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.949e-42 Identity = 84/170 (49.41%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+ K PIE+P+ V +TL GQ++ +KG G LS V V++ +++S LR + G R L NMVVGV+KGFE+KLQ++GVGYRA +G+ L L+LGFSHPV IP+GI ++ T + V G DK +GQ AA+IR +R PEPYKGKGV+Y DE +RR Sbjct: 2 SRVAKAPIEIPAGVEVTLNGQEVTIKGAQGSLSRVVNDAVELVKDESELRTNAREGVANSTAQAGTARALLQNMVVGVTKGFERKLQLIGVGYRAQAQGKKLNLTLGFSHPVEFEIPEGITIDTPTQTEVVVKGADKQLVGQVAANIRAYRKPEPYKGKGVRYADEQVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_RHOE4 (50S ribosomal protein L6 OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=rplF PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42 Identity = 85/171 (49.71%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK P+ VP+ V +T+ GQD+ VKGP G L+L + +++ ED L V + + RR+ +HGL RTL N++ GV++G+ KK+++ GVGYR AL+G+ L +LGFSHPV + P+GI VE TR +VSG DK +GQ +A+IR+ R P+PYKGKGV+Y E IRR Sbjct: 2 SRIGKIPVTVPAGVDVTISGQDVTVKGPKGTLALTISEPIAIEKAEDGSLSVTRPDDERRSRALHGLSRTLVANIITGVTEGYTKKMEIHGVGYRVALKGKDLEFALGFSHPVPIEAPEGITFVVESPTRFSVSGIDKQKVGQISANIRRLRRPDPYKGKGVRYEGEQIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_METNO (50S ribosomal protein L6 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplF PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42 Identity = 87/170 (51.18%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VP+ VT T+ GQ +KVKG GEL P +V V E+ + V+ +T+ A + GL R N+V GV+KGFEKKL++ GVGYRAA+ G+VL LSLG+SH + IP GI + I V+G DK +GQ AA IR++R PEPYKGKGVKY DE I R Sbjct: 2 SRVGKKPVPVPAGVTATVDGQTVKVKGSKGELQFRVPDQVAVTHENGAISVQPRSQTKEARALWGLSRAQVANLVEGVTKGFEKKLEINGVGYRAAVAGKVLKLSLGYSHDIEYEIPAGITITTPRPVEIIVAGIDKQRVGQIAAEIREYRSPEPYKGKGVKYADEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_BARHE (50S ribosomal protein L6 OS=Bartonella henselae GN=rplF PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42 Identity = 88/170 (51.76%), Postives = 118/170 (69.41%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI VPS VT T+ GQ +K KGP GELS + EV V E+SF+ V +++ A G+ R++ +N+ GV GFEK+L++ GVGYRAAL+G+ + LSLGFSH V +P G+ V++ + T I VSG DK +GQ AA IR++R PEPYKGKG+K+ DE I R Sbjct: 2 SRIGKKPISVPSGVTATVEGQLVKAKGPKGELSYLVNDEVLVKLEESFISVSPRDQSKDARSKWGMSRSMIENIFCGVKDGFEKRLEINGVGYRAALQGKDIQLSLGFSHDVIYKVPSGVTVSIPKPTEIVVSGIDKQQVGQVAAEIREYRRPEPYKGKGIKHADERIFR 171 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |