EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNSC (50S ribosomal protein L6 OS=Synechococcus sp. (strain CC9605) GN=rplF PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 88/172 (51.16%), Postives = 113/172 (65.70%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPR--EVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK P+ VP VT++L G +KVKGP GEL P V V ++++ + V T R + + HGL RTL NM+ GVS G+ K L++VGVG RA ++G+ LV+S G+SHPV M P+GI VE NTR+ VSG DK +G AA +R RPPEPYKGKG+KY E I R Sbjct: 2 SRIGKNPVPVPEKVTVSLDGLTVKVKGPKGELERTLPEGVSVSVSQDNNTIVVSPTSTKRISRERHGLSRTLVANMIEGVSNGYSKALEIVGVGSRAQVKGKTLVVSAGYSHPVEMEAPEGITFKVENNTRVIVSGIDKELVGNEAAKVRAIRPPEPYKGKGIKYEGERILR 173
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_SYNS9 (50S ribosomal protein L6 OS=Synechococcus sp. (strain CC9902) GN=rplF PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 88/170 (51.76%), Postives = 109/170 (64.12%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK P+ VP VT++L G +KVKGP GEL P V V +E + + V T R + + HGL RTL NM+ GV G+ K L++VGVG RA ++G LV+S G+SHPV M P GI VE NTR+ VSG DK +G AA +R RPPEPYKGKG+KY E I R Sbjct: 2 SRIGKNPVPVPDKVTVSLDGLTVKVKGPKGELERTLPEGVSVSQEANTIVVAPTSTKRISRERHGLSRTLVANMIEGVHNGYSKALEIVGVGSRAQVKGTTLVVSAGYSHPVEMPAPAGITFKVENNTRVIVSGIDKELVGNEAAKVRAIRPPEPYKGKGIKYEGEHILR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_PELPD (50S ribosomal protein L6 OS=Pelobacter propionicus (strain DSM 2379) GN=rplF PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 87/170 (51.18%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK PI++ +V + L V+GPLG+LS V ++ DS + V + E+ A HGL RTL NMV GV+KGF+K L++ GVGYRA ++G LVLSLG+SHPV TIP G+ + V++ T++ V G+DK +G+ AA IR +RPPEPYKGKGVKY DE I R Sbjct: 2 SRIGKLPIDISKDVKLAFSDSILSVQGPLGKLSRRIMPCVNLEITDSCIIVMRNDESGTARSAHGLTRTLVSNMVNGVTKGFQKSLEINGVGYRAEVKGSELVLSLGYSHPVVFTIPAGVTIEVDKLTKVVVKGFDKELVGETAAKIRSFRPPEPYKGKGVKYADETILR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_METEP (50S ribosomal protein L6 OS=Methylobacterium extorquens (strain PA1) GN=rplF PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 87/170 (51.18%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VPS VT T+ GQ +KVKG GEL V P +V V+ +D + V+ ++++A + G R N+V GVSKGFEKKL++ GVGYRAA+ G+ L LSLG+SH + IP GI + + T I VSG D+ +GQ AA IR++R PEPYKGKGVKY E I R Sbjct: 2 SRVGKKPVPVPSGVTATVTGQTVKVKGSKGELQFVVPSQVVVEFKDGAVSVQPKDQSKQARSLWGTSRAQVANLVEGVSKGFEKKLEITGVGYRAAMAGKALKLSLGYSHDIEYEIPAGITIVTPKPTEIVVSGIDRQRVGQVAAEIREYRGPEPYKGKGVKYAGEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_METC4 (50S ribosomal protein L6 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rplF PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 87/170 (51.18%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK+P+ VPS VT T+ GQ +KVKG GEL V P +V V+ +D + V+ ++++A + G R N+V GVSKGFEKKL++ GVGYRAA+ G+ L LSLG+SH + IP GI + + T I VSG D+ +GQ AA IR++R PEPYKGKGVKY E I R Sbjct: 2 SRVGKKPVPVPSGVTATVTGQTVKVKGSKGELQFVVPSQVVVEFKDGAVSVQPKDQSKQARSLWGTSRAQVANLVEGVSKGFEKKLEITGVGYRAAMAGKALKLSLGYSHDIEYEIPAGITIVTPKPTEIVVSGIDRQRVGQVAAEIREYRGPEPYKGKGVKYAGEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_KINRD (50S ribosomal protein L6 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=rplF PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 89/171 (52.05%), Postives = 115/171 (67.25%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIG+ PI VP+ V +T+ G + VKGP GELS + V+R ED L+V + + R + +HGL RTL NMV GV+KG+EKKL++VG GYR +G L +LGFSHPV + P GI VE NTR +V+G DK +G+ AA+IRK R P+PYKGKGV+Y E IRR Sbjct: 2 SRIGRLPITVPAGVDVTIDGAAVTVKGPKGELSHTVAAPISVERTEDGTLQVTRPDDERVSRSLHGLTRTLISNMVEGVTKGYEKKLEIVGTGYRVTPKGSDLEFALGFSHPVVVKAPAGITFAVENNTRFSVAGIDKQQVGEIAANIRKLRKPDPYKGKGVRYAGEQIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_DESRM (50S ribosomal protein L6 OS=Desulfotomaculum reducens (strain MI-1) GN=rplF PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 82/170 (48.24%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI VP V + + G + VKGP G+L + +++ + E+ L V + + + +HGL RTL +NMV GV+ GF++ L++VGVGYRAA +G LVL++G+SHPV + P GI++ V T+I + G DK A+GQ AA+IR R PEPYKGKG+KY +E+IRR Sbjct: 2 SRIGKKPIPVPQGVDVKINGNVISVKGPKGQLEQEFHQDMNIKLEEGNLVVERPSDAKDHRALHGLTRTLLNNMVEGVTNGFQRNLELVGVGYRAAKQGNKLVLTIGYSHPVEIEPPAGIEIEVPAATKIAIKGSDKQAVGQLAANIRAVREPEPYKGKGIKYENEIIRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CLOBL (50S ribosomal protein L6 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplF PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 84/171 (49.12%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDL-KVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK P+ +P+ VT+T+ ++ VKGP GEL+ ++ + ED+ + V + + + +HGL R L +NMV GV++G+ K L++VGVGYRA L+G+ LVLSLGFSHPV M G++ VE T++ V G DK +G AA IRKWR PEPYKGKG+KY +EVIRR Sbjct: 2 SRVGKLPVAIPNGVTVTVTPDNVVTVKGPKGELAKAMSNKINIAVEDNSVVVTRDNDHKDVRALHGLTRALINNMVTGVNEGYVKTLELVGVGYRAQLQGKKLVLSLGFSHPVEMEAVSGVEFEVEGGTKVKVKGIDKELVGAVAADIRKWRKPEPYKGKGIKYENEVIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RK6_EMIHU (50S ribosomal protein L6, chloroplastic OS=Emiliania huxleyi GN=rpl6 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 87/172 (50.58%), Postives = 116/172 (67.44%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREV--KVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGKQ I +P V I L GQ + V GP G+L+ + P + +D + + + K E + + ++GL RTL NMV GVS G+ KKL + GVGYRA L+G+ L+L++G+SHPV+M P + V+VE T ITVSG +K A+G+FAA IR RPPEPYKGKG+ Y EVIRR Sbjct: 2 SRIGKQYISIPDKVNIRLEGQKVFVDGPKGKLTRILPSFICCTIDEPEKKVFLEKAEENKLSQALYGLSRTLLSNMVTGVSSGWHKKLTIAGVGYRAQLDGKDLILNMGYSHPVKMVTPPALSVSVESPTSITVSGLEKEAVGEFAAKIRSVRPPEPYKGKGIAYEGEVIRR 173
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_THERP (50S ribosomal protein L6 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rplF PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42 Identity = 88/171 (51.46%), Postives = 121/171 (70.76%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDL-KVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+PI +P+ V + L ++ +V GP G+L L ++ V RE+ ++V++ + R Q+HGL+RTL NMV GV++GF K L++ GVGYRAALEG+ LVL++G+SHPVR+ P GI VE TRI V G DK +G+ AA IR+ RPPEPY+GKG++Y EVIRR Sbjct: 2 SRIGKRPIPIPAGVQVELTPDNVVRVTGPKGQLELRLHPKMIVQRENGVVQVQRPSDERFFKQLHGLYRTLIANMVQGVTEGFRKDLEIHGVGYRAALEGKTLVLTVGYSHPVRIDPPPGISFIVESPTRIGVVGIDKQLVGEVAAQIRRVRPPEPYQGKGIRYAGEVIRR 172 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |