EY711077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_GEOKA (50S ribosomal protein L6 OS=Geobacillus kaustophilus GN=rplF PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42 Identity = 79/169 (46.75%), Postives = 119/169 (70.41%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SR+GK+PIE+P+ VT+T+ G + VKGP GEL+ + ++ + E + + V + + + +HG R+L NMV GVSKG+EK L++VGVGYRA+ +G+ LVLS+G+SHPV + +G+++ V T+I V G DK +G+ AA+IR RPPEPYKGKG++Y E++R Sbjct: 2 SRVGKKPIEIPAGVTVTVNGNTVTVKGPKGELTRTFHPDMTITVEGNVITVTRPSDEKHHRALHGTTRSLLANMVEGVSKGYEKALELVGVGYRASKQGKKLVLSVGYSHPVEIEPEEGLEIEVPSQTKIIVKGADKQRVGELAANIRAVRPPEPYKGKGIRYEGELVR 170
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_BACST (50S ribosomal protein L6 OS=Bacillus stearothermophilus GN=rplF PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42 Identity = 79/169 (46.75%), Postives = 119/169 (70.41%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIR 524 SR+GK+PIE+P+ VT+T+ G + VKGP GEL+ + ++ + E + + V + + + +HG R+L NMV GVSKG+EK L++VGVGYRA+ +G+ LVLS+G+SHPV + +G+++ V T+I V G DK +G+ AA+IR RPPEPYKGKG++Y E++R Sbjct: 2 SRVGKKPIEIPAGVTVTVNGNTVTVKGPKGELTRTFHPDMTITVEGNVITVTRPSDEKHHRALHGTTRSLLANMVEGVSKGYEKALELVGVGYRASKQGKKLVLSVGYSHPVEIEPEEGLEIEVPSQTKIIVKGADKQRVGELAANIRAVRPPEPYKGKGIRYEGELVR 170
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_ZYMMO (50S ribosomal protein L6 OS=Zymomonas mobilis GN=rplF PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 83/170 (48.82%), Postives = 110/170 (64.71%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+ +P+ VT + L VKGP GELS+ EV ED L V+ +T+RA G+ RTL N++ GV++G+ K LQ+ GVGYRAA +G+ L L LG+SH + IP+GI + E T + +SG DK +GQ AA IR+WR PEPYKGKG+KY E I R Sbjct: 2 SRIGKKPVAIPTGVTANIADGVLSVKGPKGELSMPLSSEVTYSLEDGQLSVQPVNDTKRARSFWGMQRTLVQNLIDGVTQGYSKTLQITGVGYRAASQGKTLKLQLGYSHDIDFAIPEGITIQTPEPTTVNISGIDKQKVGQVAAEIRRWRRPEPYKGKGIKYAGEFIFR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_MYCS2 (50S ribosomal protein L6 OS=Mycobacterium smegmatis GN=rplF PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 86/171 (50.29%), Postives = 117/171 (68.42%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGKQP+ VPS V +T+ GQ+L VKGP G L+L + V R ED + V + + RR+ +HGL RTL N+V GV++G+ +K+++ GVGYR L+GQ L +LG+SHPV + P+GI VE T+ +VSG DK +GQ +A IR+ R P+PYKGKGV+Y E IRR Sbjct: 2 SRIGKQPVPVPSGVDVTINGQNLSVKGPKGTLTLDVAEPISVSRAEDGAIVVTRPDDERRSRSLHGLSRTLIANLVTGVTEGYTQKMEIFGVGYRVQLKGQNLEFALGYSHPVLIEAPEGITFAVESPTKFSVSGIDKQKVGQISAVIRRLRRPDPYKGKGVRYEGEQIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_LEIXX (50S ribosomal protein L6 OS=Leifsonia xyli subsp. xyli GN=rplF PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 84/170 (49.41%), Postives = 117/170 (68.82%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIG+ PI+VP+ V + + GQ + VKGP GELSL ++V E+ + V + + R + +HGL RTL +N +VGV++G+ K L++VG GYR A +G + +LGFSHPV + P GI VE N ++TV+G DK A+G+ AA+IRK R PEPYKGKGV+Y EV+RR Sbjct: 2 SRIGRLPIDVPAGVDVKIDGQAVTVKGPKGELSLTVASPIEVKLEEGQVLVTRPDDERESRSLHGLTRTLLNNNIVGVTQGYSKGLEIVGTGYRVAQKGAGVEFALGFSHPVTVEPPAGITFTVEGNNKLTVAGIDKQAVGEVAANIRKIRKPEPYKGKGVRYAGEVVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_FRASN (50S ribosomal protein L6 OS=Frankia sp. (strain EAN1pec) GN=rplF PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 86/170 (50.59%), Postives = 111/170 (65.29%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIG+QPI VP+ V I+L G + +KGP G LS ++V RED L V + + RR+ +HGL RTL NMVVGV+ G+ K L++VGVGYR G L +LG+SHPV + PDGI+ V+ TR V G DK +G+ AA IR R P+PYKGKGV+Y EV+RR Sbjct: 2 SRIGRQPISVPTGVEISLDGPKVTIKGPKGSLSHTVAEPIEVVREDGQLIVNRPNDERRSRALHGLTRTLVSNMVVGVTAGYSKTLEIVGVGYRVQARGSDLEFALGYSHPVPVKAPDGIRFEVQTPTRFVVHGIDKQQVGEVAAKIRGLRKPDPYKGKGVRYQGEVVRR 171
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CLOPS (50S ribosomal protein L6 OS=Clostridium perfringens (strain SM101 / Type A) GN=rplF PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 82/171 (47.95%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDL-KVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK PI +P+ VT+T+ +++ VKGP GEL +++ + ED+ + V + + + +HGL R L +NMVVGVS+GF K L++ GVGYRA L+G+ LV++LG+SHPV + DG+ ++ T++ V G DK +G AA+IR WR PEPYKGKG+KY DEVIRR Sbjct: 2 SRVGKMPIAIPAGVTVTVTPENVVTVKGPKGELVKAMHKDINIAVEDAQVVVTRPSDVKEHRALHGLTRALLNNMVVGVSQGFSKTLELNGVGYRAQLQGKKLVMNLGYSHPVEVEAVDGVDFKLDGTTKVIVEGIDKEKVGAVAANIRSWRKPEPYKGKGIKYSDEVIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CLOPE (50S ribosomal protein L6 OS=Clostridium perfringens GN=rplF PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 82/171 (47.95%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDL-KVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK PI +P+ VT+T+ +++ VKGP GEL +++ + ED+ + V + + + +HGL R L +NMVVGVS+GF K L++ GVGYRA L+G+ LV++LG+SHPV + DG+ ++ T++ V G DK +G AA+IR WR PEPYKGKG+KY DEVIRR Sbjct: 2 SRVGKMPIAIPAGVTVTVTPENVVTVKGPKGELVKAMHKDINIAVEDAQVVVTRPSDVKEHRALHGLTRALLNNMVVGVSQGFSKTLELNGVGYRAQLQGKKLVMNLGYSHPVEVEAVDGVDFKLDGTTKVIVEGIDKEKVGAVAANIRSWRKPEPYKGKGIKYSDEVIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_CLOP1 (50S ribosomal protein L6 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rplF PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 82/171 (47.95%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDL-KVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SR+GK PI +P+ VT+T+ +++ VKGP GEL +++ + ED+ + V + + + +HGL R L +NMVVGVS+GF K L++ GVGYRA L+G+ LV++LG+SHPV + DG+ ++ T++ V G DK +G AA+IR WR PEPYKGKG+KY DEVIRR Sbjct: 2 SRVGKMPIAIPAGVTVTVTPENVVTVKGPKGELVKAMHKDINIAVEDAQVVVTRPSDVKEHRALHGLTRALLNNMVVGVSQGFSKTLELNGVGYRAQLQGKKLVMNLGYSHPVEVEAVDGVDFKLDGTTKVIVEGIDKEKVGAVAANIRSWRKPEPYKGKGIKYSDEVIRR 172
BLAST of EY711077 vs. ExPASy Swiss-Prot
Match: RL6_BRUME (50S ribosomal protein L6 OS=Brucella melitensis GN=rplF PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 91/170 (53.53%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 18 SRIGKQPIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDREDSFLRVRKTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRR 527 SRIGK+P+ VP+ VT ++ GQ +K KG GELS V EV V ED +RV ++R A G+ RT+ N+ VGV GFEKKL++ GVGYRAA++G+ L LSLGFSH V +P GI V V + T I V+G DK +GQ AA IR++R PEPYKGKGVKY E I R Sbjct: 2 SRIGKKPVPVPAGVTASVEGQTVKAKGAKGELSFVVHDEVLVKMEDGAVRVDPRDQSREARSKWGMSRTMISNIFVGVKDGFEKKLEISGVGYRAAMQGKNLQLSLGFSHEVVYDVPAGITVAVPKPTEIVVTGIDKQQVGQVAAEIREYRGPEPYKGKGVKYAGEKIVR 171 The following BLAST results are available for this feature:
BLAST of EY711077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711077 ID=EY711077; Name=EY711077; organism=Citrus sinensis; type=EST; length=723bpback to top |