EY711075

Overview
NameEY711075
Unique NameEY711075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODPA_BACSU (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus subtilis GN=pdhA PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11
Identity = 38/123 (30.89%), Postives = 63/123 (51.22%), Query Frame = 2
Query:  434 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 802
            ++ +K+   F++L++ GE++  +    ++ +   ++   MV  +V+D       RQGR  FY  T G+EA  I +  AL  +DF+LP YR+   L+W G  L     Q F       +G QMP
Sbjct:   17 DAIKKQFETFQILNEKGEVVNEAAMPDLTDDQLKELMRRMVFTRVLDQRSISLNRQGRLGFYAPTAGQEASQIATHFALEKEDFVLPGYRDVPQLIWHGLPLY----QAFLFSRGHFRGNQMP 135          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODPA_BACCE (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus cereus GN=pdhA PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  464 RVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 802
            ++L++ GE++  +   ++S +   ++   MV  +V+D       RQGR  FY  T G+EA  + S  AL A+DFILP YR+   L+W G  L     Q F        G QMP
Sbjct:   27 QILNEKGEVVNEAAMPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLGFYAPTAGQEASQLASHFALEAEDFILPGYRDVPQLVWHGLPLY----QAFLFSRGHFMGNQMP 135          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODBA_BACSU (2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis GN=bfmBAA PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 2
Query:  515 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKAD-DGKGRQMPIHYGSKK 823
            ++ + AV MY  M+  + +D  ++   R G+  F ++  G+EA  +G+A AL  + D++LP YR+ GV+L  G T +      FA  AD +  GRQMP H+G KK
Sbjct:   11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAFALDREMDYVLPYYRDMGVVLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKK 115          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODPA_STAAW (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MW2) GN=pdhA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 2
Query:  440 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 802
            ++ +    ++LD+NG ++       ++ E  V++   MV  +++D       RQGR  FY  T G+EA  + S  AL  +D+ILP YR+   ++W G  L     + F       KG Q P
Sbjct:   18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP 134          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODPA_STAAS (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MSSA476) GN=pdhA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 2
Query:  440 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 802
            ++ +    ++LD+NG ++       ++ E  V++   MV  +++D       RQGR  FY  T G+EA  + S  AL  +D+ILP YR+   ++W G  L     + F       KG Q P
Sbjct:   18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP 134          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODPA_STAAR (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MRSA252) GN=pdhA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 2
Query:  440 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 802
            ++ +    ++LD+NG ++       ++ E  V++   MV  +++D       RQGR  FY  T G+EA  + S  AL  +D+ILP YR+   ++W G  L     + F       KG Q P
Sbjct:   18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP 134          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODPA_STAAN (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain N315) GN=pdhA PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 2
Query:  440 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 802
            ++ +    ++LD+NG ++       ++ E  V++   MV  +++D       RQGR  FY  T G+EA  + S  AL  +D+ILP YR+   ++W G  L     + F       KG Q P
Sbjct:   18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP 134          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODPA_STAAM (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 2
Query:  440 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 802
            ++ +    ++LD+NG ++       ++ E  V++   MV  +++D       RQGR  FY  T G+EA  + S  AL  +D+ILP YR+   ++W G  L     + F       KG Q P
Sbjct:   18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP 134          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODPA_STAAC (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain COL) GN=pdhA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 2
Query:  440 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 802
            ++ +    ++LD+NG ++       ++ E  V++   MV  +++D       RQGR  FY  T G+EA  + S  AL  +D+ILP YR+   ++W G  L     + F       KG Q P
Sbjct:   18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFYAPTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQFP 134          
BLAST of EY711075 vs. ExPASy Swiss-Prot
Match: ODBA_THET2 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1757 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.250e-11
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 2
Query:  422 RFIPESSEKRVPCFRVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKL 826
            RF P + E      R++ + GE +   DF   +  E   ++Y  M+  +++D       R G+ SF     G EA  +  A A+    D++ P YR+ G+ L  G  L++   Q+ A KAD  KGRQMP H GSK L
Sbjct:    7 RFEPFTEEP----IRLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELFGQMLATKADPNKGRQMPEHPGSKAL 137          

HSP 2 Score: 22.3274 bits (46), Expect = 5.250e-11
Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  829 YITISSPIATHFP 867
            + T++SPIA+H P
Sbjct:  139 FFTVASPIASHVP 151          
The following BLAST results are available for this feature:
BLAST of EY711075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ODPA_BACSU1.150e-1130.89Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_BACCE2.563e-1134.51Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODBA_BACSU2.563e-1137.142-oxoisovalerate dehydrogenase subunit alpha OS=Ba... [more]
ODPA_STAAW4.371e-1129.75Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_STAAS4.371e-1129.75Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_STAAR4.371e-1129.75Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_STAAN4.371e-1129.75Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_STAAM4.371e-1129.75Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODPA_STAAC4.371e-1129.75Pyruvate dehydrogenase E1 component subunit alpha ... [more]
ODBA_THET25.250e-1133.582-oxoisovalerate dehydrogenase subunit alpha OS=Th... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-E04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711075 ID=EY711075; Name=EY711075; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGCCCGTCAGTGCAAGGTACTGATTCCATCAAAAGCCTCGC
TGGCTACAAATCCCACCATCATTTTCTTCCTTCTTTCTTACCTTCGTATC
TTTGCCGTTGTTCAATATCGAAAAAATTAAATGGCGATTTGGTTAACAAA
ATCAAGAGCCATGGCCCAATGCTTACGGCAAAGAGTTGGTTTGCTGAGGA
TATTAAGTGGCCAGAGTTGTTCATCCCCATCAACAATAATATTCCCACTT
CAGCAATATAATTCATCATCACTTCCAAGCAAAACCCTTTTCTCGCCGGG
GCGTTCCGAGTCCACCGTTGCTTCCAATCAGCTGGATTCTTTGTCTTCCA
GTGACAGCGATGATGATCATCATCAGGTCTTGGATTTTCCCGGAGGCAAA
GTTGGATATACTTCTGAAATGAGGTTCATTCCTGAGTCTTCAGAGAAAAG
AGTGCCTTGTTTTCGAGTTCTTGATGACAATGGAGAGCTAATCAAGGGCA
GTGATTTTCAACAGGTGAGCAAGGAAGTTGCTGTAAAGATGTATAGCCAT
ATGGTCACACTGCAGGTAATGGACTCTGTATTGTACGAAGCACAAAGGCA
AGGGAGATTTTCTTTCTATCTTACAACAATTGGTGAAGAAGCAATCAACA
TAGGATCAGCAGCTGCACTCAGCGCCGATGATTTTATCTTGCCTCAGTAC
CGAGAGCCTGGAGTACTCTTATGGCGTGGCTACACATTGCAACAATTTGC
AAACCAGGTGTTTGCAAACAAGGCTGATGATGGGAAAGGCAGACAGATGC
CAATTCATTATGGGTCTAAAAAGCTTACTACATCACCATATCGTCACCTA
TCGCTACACACTTCCCTCAGCTGNNTGTGTGGCTATTTCTCTAAATGGA
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