EY720140

Overview
NameEY720140
Unique NameEY720140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.506e-17
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 3
Query:  207 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 434
            M I VKTLTGK I L+++ +D +  +K ++++KEGIPP QQRLI+AGKQ+ D +    Y+++  S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76          

HSP 2 Score: 85.8853 bits (211), Expect = 3.229e-16
Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  435 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 662
            M I VKTLTGK I L+++ +D +  +K ++++KEGIPP  QRLI+AGKQ+ D +    Y+++  S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76          
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.603e-15
Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 3
Query:  207 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 434
            M + VKTLTGK I++E++ SD + ++K  +++KEGIPP QQRLIF GKQ++D  T+ D ++ +   LHLVL LRGG
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76          

HSP 2 Score: 81.2629 bits (199), Expect = 7.954e-15
Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = 3
Query:  435 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 662
            M + VKTLTGK I++E++ SD + ++K  +++KEGIPP  QRLIF GKQ++D  T+ D ++ +   LHLVL LRGG
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76          
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4)

HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15
Identity = 50/149 (33.56%), Postives = 78/149 (52.35%), Query Frame = 3
Query:  219 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 662
            VK L G    + V +S T+  +K +I  K G+P  QQRL      L+DG TL+   +   ST+ LV++     + I V+   G +   EV  + T+D +K K+  +E +  D   L F G+ +ED   L +Y ++ + T+   LRLRGG
Sbjct:    7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155          
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.357e-14
Identity = 49/156 (31.41%), Postives = 81/156 (51.92%), Query Frame = 3
Query:  213 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 662
            + V++     +T +    D++  +K  ++ K  +P   Q L+   K L+  R+L+ Y I KE T+HL L++       + +F+       K   L+V  S ++  VKA I+ K GI P+ Q +   GK+LEDG+ +ADY I+K + L L     GG
Sbjct:   10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165          
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: UCRP_HUMAN (Interferon-induced 17 kDa protein OS=Homo sapiens GN=ISG15 PE=1 SV=5)

HSP 1 Score: 78.5666 bits (192), Expect = 5.155e-14
Identity = 52/151 (34.44%), Postives = 81/151 (53.64%), Query Frame = 3
Query:  219 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF--AGKQLEDGRTLADYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 662
            VK L G    + + SS ++  +KA+I  K G+   QQRL    +G  L+D   LA   +   ST+ LV+ +    + I V+   G++ T EV  + T+ ++K ++   EG+  D   L F GK LED   L +Y ++  ST+ + LRLRGG
Sbjct:    7 VKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG 157          
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.695e-12
Identity = 44/146 (30.14%), Postives = 71/146 (48.63%), Query Frame = 3
Query:  243 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL------RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 662
            +T +   SD +  +   I+ +  +    Q L+   K L+  R L+ Y I KE+T+HL L++         + +      G+   L V  S ++  VK  I++   +PP  Q +   GK+LEDG+ +ADYNI+  S L L     GG
Sbjct:   16 MTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCIGG 161          
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: UBD_MOUSE (Ubiquitin D OS=Mus musculus GN=Ubd PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11
Identity = 44/148 (29.73%), Postives = 72/148 (48.65%), Query Frame = 3
Query:  237 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFV--KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 662
            + +T E   +D +  +   I+ +  +    Q L+   K L+  R L+ Y I KE+T+HL L++       + +F+      G+   L V  S ++  VK  I+    + P  Q +   GK+LEDG+ +ADYNI+  S L L     GG
Sbjct:   15 RLMTFETTENDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRKLSSYGIDKETTIHLTLKVVKPSDEELPLFLVESKNEGQRHLLRVRRSSSVAQVKEMIESVTSVIPKKQVVNCNGKKLEDGKIMADYNIKSGSLLFLTTHCTGG 162          
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = 3
Query:  207 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIF-AGKQLE--------DGRTLADYNIQKESTLHL-VLRLRG 659
            M++F++TLTG    L V   +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L DYNI +  TL LVL +RGG    + T    T     + ++ +D+ + ++ +K         L++  G QL         DG      +  K+   HL VLR +G
Sbjct:   28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGP---INTRRVPTDDPLRKMAEYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHVLRRKG 185          
BLAST of EY720140 vs. ExPASy Swiss-Prot
Match: UCRP_BOVIN (Ubiquitin cross-reactive protein OS=Bos taurus GN=ISG15 PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11
Identity = 46/150 (30.67%), Postives = 77/150 (51.33%), Query Frame = 3
Query:  219 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDXQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 662
            VK L G+ I + +  S T+  +K  I  K  +P  QQRL     +  L++G  L    ++  ST+ LV++    + I V+   G++   EV+   T+  +K ++  KE +  D   L F G+ ++D   L +Y + K  T+ + LRLRGG
Sbjct:    7 VKMLGGQEILVPLRDSMTVSELKQFIAQKINVPAFQQRLAHLDSREVLQEGVPLVLQGLRAGSTVLLVVQ--NCISILVRNDKGRSSPYEVQLKQTVAELKQQVCQKERVQADQFWLSFEGRPMDDEHPLEEYGLMKGCTVFMNLRLRGG 154          
The following BLAST results are available for this feature:
BLAST of EY720140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
UBL1_SCHPO6.506e-1752.63Ubiquitin-like protein 1 OS=Schizosaccharomyces po... [more]
RUB1_YEAST1.603e-1552.63NEDD8-like protein RUB1 OS=Saccharomyces cerevisia... [more]
UCRP_MOUSE7.954e-1533.56Ubiquitin cross-reactive protein OS=Mus musculus G... [more]
UBD_HUMAN1.357e-1431.41Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2[more]
UCRP_HUMAN5.155e-1434.44Interferon-induced 17 kDa protein OS=Homo sapiens ... [more]
UBD_RAT3.695e-1230.14Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1[more]
UBD_MOUSE3.128e-1129.73Ubiquitin D OS=Mus musculus GN=Ubd PE=2 SV=1[more]
ANUB1_HUMAN4.085e-1132.92AN1-type zinc finger and ubiquitin domain-containi... [more]
UCRP_BOVIN5.335e-1130.67Ubiquitin cross-reactive protein OS=Bos taurus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720140 ID=EY720140; Name=EY720140; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGGATTATATTAAACCAATAAAAAAAAAAAAGAAACAAAAA
AGATATTTAGTTTAGATACCGAGGCTCCCAATCTCAGCCTTCCAACGTAA
GTAATTAGTAACTACATTCTTAATCATTATCCTTGTTCTGGTCTTGATTA
GTGTTGTTGATTTAGTTAATTAAAATTAACTTATTTGCTTTGATTACGAT
TAACAGATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCT
CGAGGTGGAGAGCTCCGACACGATCGACAACGTCAAGGCTAAGATCCAGG
ACAAGGAAGGGATTCCACCGGACCAGCAGCGGCTGATCTTCGCCGGAAAG
CAGCTCGAGGACGGGCGCACCTTGGCGGATTACAACATCCAGAAGGAGTC
GACTCTCCACCTCGTCCTCCGTCTCCGCGGCGGCATGCAGATCTTCGTCA
AGACTCTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGACACG
ATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCCCCGGA
CCANCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCC
TGGCCGATTATAACATCCAGAAGGAATCCACGCTCCACCTTGTGTTGCGC
CTGAGGGGAGGAATGCAGATCTTCGTCAAGACGTTGACCGGGAAGACGAT
CACCCGGGAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGGCCAGA
TCCAGGACAAGAGGGGATTCTTCGGACCAGCAGAGTTCATCCTTCGCGGC
ATCAGCTCGAGGATGGCGGGATCTCGCGATTAAACATTAAAAGGAGTCAC
TCTCCACTGGTCT
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