EY711063

Overview
NameEY711063
Unique NameEY711063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M-type 2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 45/144 (31.25%), Postives = 73/144 (50.69%), Query Frame = 3
Query:  213 GSRTNLSLKS------YNNSLPKLAIRVRCGASSGITEI---TESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPESXREGAITKLKLKEYIDTLL 617
            G R  LSL        +   + +L   V C A    T+I    +S + + VLK+  PV+V+F A WCGPC+++ P V  LAQ Y  ++   K++ D +P    +Y V  +PT+++   G++  +    GA+ K  L   +D  L
Sbjct:   44 GLRIRLSLSPASLTSIHQPRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEK--KDTIIGAVPKTTLTSSLDKFL 185          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: THIO_CHLTR (Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.075e-11
Identity = 31/68 (45.59%), Postives = 49/68 (72.06%), Query Frame = 3
Query:  357 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPES 560
            VL++F A WCGPC+++ P +E LA E    +T++K+D D++P+  E+Y V  +PTLIL ++G+EV  S
Sbjct:   19 VLIDFFAEWCGPCKMLTPVLEALAAEL-PHVTILKVDIDSSPRPAEQYSVSSIPTLILFKDGKEVERS 85          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.075e-11
Identity = 41/110 (37.27%), Postives = 57/110 (51.82%), Query Frame = 3
Query:  252 SLPKLAIRVRCGASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQ--EYG-DRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPESXREG 572
            SL   ++     A S + ++  S F + VLKS +P LVEF A WCG C+ +AP  E LA   EY  D++ + K+D DA   L + + V G PTL       E P   + G
Sbjct:    6 SLVVASLAAAVAAKSAVLDLIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKGG 115          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: THIO_MYCGA (Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.128e-11
Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 3
Query:  309 ITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPESXREGAITKLKLKEYI 605
            IT     + +L + + V+V+F ANWCGPC+++ P  E +AQ+  D  T VK+D D   ++  EY++  +PT+I  Q+G+   +  R G I K +LKE +
Sbjct:    4 ITNKAELDQLLSTNKKVVVDFYANWCGPCKILGPIFEEVAQDKKD-WTFVKVDVDQANEISSEYEIRSIPTVIFFQDGKMADK--RIGFIPKNELKELL 99          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: TIGA_ASPNG (Protein disulfide-isomerase tigA OS=Aspergillus niger GN=tigA PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 3
Query:  291 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEY---GDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPESXREG 572
            ++ + ++    F + VLKS +P LVEF A WCG C+ +AP  E L Q +    D++TV K+D D +  L  ++ V G PTL       + PE  + G
Sbjct:   18 TAAVVDLVPKNFDDVVLKSGKPALVEFFAPWCGHCKNLAPVYEELGQAFAHASDKVTVGKVDADEHRDLGRKFGVQGFPTLKWFDGKSDEPEDYKGG 114          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: THIO_CHLMU (Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 3
Query:  357 VLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPES 560
            VLV+F A WCGPC+++ P +E LA E    +T++K+D DA+P+  E++ V  +PTLIL ++G+EV  S
Sbjct:   19 VLVDFFAEWCGPCKMLTPVLEALAAEL-PYVTILKLDIDASPRPAEQFGVSSIPTLILFKDGKEVERS 85          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEBR (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis briggsae GN=png-1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.335e-11
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 3
Query:  300 ITEITESEFPNTVLK---SERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVP--ESXREGAITKLKLKEYIDT 611
            + E++     N +L+   S R ++V+F ANWCGPCR+++PA E L+ E+G+  T +K++ D    ++  Y +  +PT +  +N Q+V       E AI     K Y  T
Sbjct:    3 VREVSRLPELNEILEKSDSNRLIIVDFFANWCGPCRMISPAFERLSMEFGN-ATFLKVNTDLARDIVMRYSISAMPTFLFFKNKQQVDSVRGANESAIISTIRKHYSST 110          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: THIO2_SHIFL (Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 3
Query:  279 RCGASSGITEITES--EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPESXREGAITKLKLKEYIDTLL 617
            RCG      E+  +  E  + +LK + PV+++F A WCGPCR  AP  E +AQE   ++  VK++ +A  +L   + +  +PT+++ +NGQ V      GA+ K     +++  L
Sbjct:   27 RCGHDLFDGEVINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVV--DMLNGAVPKAPFDSWLNESL 139          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: THIO2_ECOLI (Thioredoxin-2 OS=Escherichia coli (strain K12) GN=trxC PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 3
Query:  279 RCGASSGITEITES--EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPESXREGAITKLKLKEYIDTLL 617
            RCG      E+  +  E  + +LK + PV+++F A WCGPCR  AP  E +AQE   ++  VK++ +A  +L   + +  +PT+++ +NGQ V      GA+ K     +++  L
Sbjct:   27 RCGHDLFDGEVINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVV--DMLNGAVPKAPFDSWLNESL 139          
BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: THIO2_ECOL6 (Thioredoxin-2 OS=Escherichia coli O6 GN=trxC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 3
Query:  279 RCGASSGITEITES--EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPESXREGAITKLKLKEYIDTLL 617
            RCG      E+  +  E  + +LK + PV+++F A WCGPCR  AP  E +AQE   ++  VK++ +A  +L   + +  +PT+++ +NGQ V      GA+ K     +++  L
Sbjct:   27 RCGHDLFDGEVINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVV--DMLNGAVPKAPFDSWLNESL 139          
The following BLAST results are available for this feature:
BLAST of EY711063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
TRXM2_ARATH8.231e-1231.25Thioredoxin M-type 2, chloroplastic OS=Arabidopsis... [more]
THIO_CHLTR1.075e-1145.59Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 ... [more]
ERP38_NEUCR1.075e-1137.27Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]
THIO_MYCGA3.128e-1137.37Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE... [more]
TIGA_ASPNG4.085e-1136.08Protein disulfide-isomerase tigA OS=Aspergillus ni... [more]
THIO_CHLMU4.085e-1147.06Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV... [more]
NGLY1_CAEBR5.335e-1133.03Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
THIO2_SHIFL9.100e-1132.17Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV... [more]
THIO2_ECOLI9.100e-1132.17Thioredoxin-2 OS=Escherichia coli (strain K12) GN=... [more]
THIO2_ECOL69.100e-1132.17Thioredoxin-2 OS=Escherichia coli O6 GN=trxC PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-D02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711063 ID=EY711063; Name=EY711063; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGACAATTCAAAAAGAAAAGAAAATGCTCTAAAAATCTTTA
ATCACTTGCAAAATGGATATCGTCTTCTCCAACTCCACTTTATTGTTCAG
ACAACAACCACTGGTTGCTCCTGTTCGTACAGTTACTGGGACCCACAGGC
AACAGAACATCATCACCAGCGCTACAACAACAACAACGTCGTCAAAGAAT
CAGCTATTGTTCGGGTCTCGAACGAACCTCTCACTAAAGTCTTATAATAA
TTCGCTTCCCAAGTTGGCAATACGCGTACGCTGCGGTGCTAGCAGTGGCA
TAACGGAGATTACCGAAAGTGAGTTCCCAAACACGGTCTTGAAATCTGAG
CGTCCGGTTCTTGTCGAGTTCGTGGCCAATTGGTGCGGTCCTTGCCGCTT
GGTTGCTCCCGCCGTCGAATGGCTCGCCCAGGAATACGGAGACAGATTGA
CTGTCGTAAAGATTGATCATGACGCAAACCCACAACTAATAGAGGAATAC
AAAGTTTATGGATTGCCGACCTTGATTCTCTTNCAGAATGGACAGGAAGT
TCCGGAAAGCANGAGGGAAGGTGCAATTACTAAGTTGAAGCTTAAAGAGT
ATATTGATACTCTTTTAGAATCAATCTCAGTGGCTTTAGCCCTCTTTTGA
CATGCTCAGCAAATTATGCTCGTTCTTTCACAGATTTTGACATCATTGGC
AAAGACGAATATGGGTAAATATTTACTTTTTCCNTATGNAAATCTGNNNA
TCATCGTACAGNATCCGTGGATGNNATCAATGNATAAATTTGATCTATGT
ACCAAGATATCATACCTAATTTCTGATATCCAACGGGCACATTGGNTTTT
CAAAAAAAAAAAAAA
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