EY711063

Overview
NameEY711063
Unique NameEY711063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711063 vs. ExPASy Swiss-Prot
Match: THIO2_ECO57 (Thioredoxin-2 OS=Escherichia coli O157:H7 GN=trxC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 3 
Query:  279 RCGASSGITEITES--EFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILXQNGQEVPESXREGAITKLKLKEYIDTLL 617
            RCG      E+  +  E  + +LK + PV+++F A WCGPCR  AP  E +AQE   ++  VK++ +A  +L   + +  +PT+++ +NGQ V      GA+ K     +++  L
Sbjct:   27 RCGHDLFDGEVINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVV--DMLNGAVPKAPFDSWLNESL 139
The following BLAST results are available for this feature:
BLAST of EY711063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
THIO2_ECO579.100e-1132.17Thioredoxin-2 OS=Escherichia coli O157:H7 GN=trxC ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-D02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711063 ID=EY711063; Name=EY711063; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGACAATTCAAAAAGAAAAGAAAATGCTCTAAAAATCTTTA
ATCACTTGCAAAATGGATATCGTCTTCTCCAACTCCACTTTATTGTTCAG
ACAACAACCACTGGTTGCTCCTGTTCGTACAGTTACTGGGACCCACAGGC
AACAGAACATCATCACCAGCGCTACAACAACAACAACGTCGTCAAAGAAT
CAGCTATTGTTCGGGTCTCGAACGAACCTCTCACTAAAGTCTTATAATAA
TTCGCTTCCCAAGTTGGCAATACGCGTACGCTGCGGTGCTAGCAGTGGCA
TAACGGAGATTACCGAAAGTGAGTTCCCAAACACGGTCTTGAAATCTGAG
CGTCCGGTTCTTGTCGAGTTCGTGGCCAATTGGTGCGGTCCTTGCCGCTT
GGTTGCTCCCGCCGTCGAATGGCTCGCCCAGGAATACGGAGACAGATTGA
CTGTCGTAAAGATTGATCATGACGCAAACCCACAACTAATAGAGGAATAC
AAAGTTTATGGATTGCCGACCTTGATTCTCTTNCAGAATGGACAGGAAGT
TCCGGAAAGCANGAGGGAAGGTGCAATTACTAAGTTGAAGCTTAAAGAGT
ATATTGATACTCTTTTAGAATCAATCTCAGTGGCTTTAGCCCTCTTTTGA
CATGCTCAGCAAATTATGCTCGTTCTTTCACAGATTTTGACATCATTGGC
AAAGACGAATATGGGTAAATATTTACTTTTTCCNTATGNAAATCTGNNNA
TCATCGTACAGNATCCGTGGATGNNATCAATGNATAAATTTGATCTATGT
ACCAAGATATCATACCTAATTTCTGATATCCAACGGGCACATTGGNTTTT
CAAAAAAAAAAAAAA
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