EY711062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_HALSA (Deoxyribodipyrimidine photo-lyase OS=Halobacterium salinarium GN=phr PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.375e-25 Identity = 57/168 (33.93%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLRE-YSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LSPHL FG + +R V+ R + + + E+V F+ + RE Y++ + FN E + W D +AW+ G TGYP+VDAGMR+L A ++H+R+R++V++F K L + WR G +F + L D D +D GWQ+ + T D + + R+ Sbjct: 243 LSPHLKFGTIGIRTVYEAARAAKSDADTDDER---ENVAAFIGQLAWREFYAQVLYFNQNVVSEN-FKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIVAAFLTKDLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRV 406 HSP 2 Score: 30.8018 bits (68), Expect = 3.375e-25 Identity = 10/31 (32.26%), Postives = 21/31 (67.74%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLPTEWI 636 +P +G ++DP+ +Y+ ++PEL +P + I Sbjct: 408 NPMTQGERYDPDADYITEFVPELRDVPADAI 438
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_SYNP6 (Deoxyribodipyrimidine photo-lyase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=phr PE=1 SV=4) HSP 1 Score: 103.605 bits (257), Expect = 1.639e-24 Identity = 52/153 (33.99%), Postives = 85/153 (55.56%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQY 499 LSP L FG + +R+ + R + A + S+ ++ + + RE+ ++ ++ P + P + F W E F AW Q +TGYP+VDA MR+L TGW+H+R ++V+SF K L + WR G ++F L+D DL ++ GWQ+ Sbjct: 243 LSPALKFGAIGIRQAW---RAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADGPYRSLWQQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCWMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQW 392 HSP 2 Score: 30.8018 bits (68), Expect = 1.639e-24 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPEL 612 +P + KFD Y++RWLPEL Sbjct: 407 NPASQAKKFDATATYIKRWLPEL 429
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_THET8 (Deoxyribodipyrimidine photo-lyase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=phr PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.783e-24 Identity = 60/167 (35.93%), Postives = 88/167 (52.69%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LSP+ G +S R +W E + G E ++ + R++S ++ ++ P+ ERPL + F W DE F+AW +G+TG PLVDA MREL ATG+L +R R+ + F VK L LPW+ + F LLD D + GWQ+ G D + R+ Sbjct: 212 LSPYFALGVLSPRLA---------AW--EAERRGGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQAFPWQEDEALFQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRV 367 HSP 2 Score: 29.261 bits (64), Expect = 2.783e-24 Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPE 609 +P +G + DP G +++RW PE Sbjct: 369 NPVLQGERHDPEGRWLKRWAPE 390
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_THET2 (Deoxyribodipyrimidine photo-lyase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=phr PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.714e-24 Identity = 60/167 (35.93%), Postives = 87/167 (52.10%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LSP+ G +S R +W E + G E ++ + R++S ++ ++ P+ ERPL + W DE F+AW +GRTG PLVDA MREL ATG+L +R R+ + F VK L LPW+ + F LLD D + GWQ+ G D + R+ Sbjct: 212 LSPYFALGVLSPRLA---------AW--EAERRGGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQALPWQEDEALFRAWYEGRTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRV 367 HSP 2 Score: 29.261 bits (64), Expect = 4.714e-24 Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPE 609 +P +G + DP G +++RW PE Sbjct: 369 NPVLQGERHDPEGRWLKRWAPE 390
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_SYNY3 (Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803) GN=cry PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.769e-22 Identity = 59/170 (34.71%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL--KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDI 547 SP L G +S R ++ V+ E + ++S + + + R++ R+++ Y ++ G L K F W D+ F+ WR G+TGYPLVDA MREL TG++ +R R V+SF K L + WRWG ++F L+D D+ S+ W Y +G D R F +I Sbjct: 253 SPWLALGCLSPRFIYQEVK------RYEQERVSNDSTHWLIFELLWRDFFRFVA--QKYGNKLFNRGGLLNKNFPWQEDQVRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGNDARDFRYFNI 414 HSP 2 Score: 34.6538 bits (78), Expect = 1.769e-22 Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 556 EGYKFDPNGEYVRRWLPELARLPTEWI 636 + ++DP G Y+R WLPEL LP + I Sbjct: 417 QSQQYDPQGTYLRHWLPELKNLPGDKI 443 HSP 3 Score: 20.4014 bits (41), Expect = 1.769e-22 Identity = 8/23 (34.78%), Postives = 12/23 (52.17%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFP 710 PW + + G++LG YP P Sbjct: 446 PWLLSATEQKQWGVQLGVDYPRP 468
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_BUCBP (Deoxyribodipyrimidine photo-lyase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=phrB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.440e-22 Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLV---------RIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKF-FSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 LS HL G +S R+ L+ ++++ W NE + RE+ +++ + +P + L H + W + Y W+QG TGYP++DAGMR+L GW+ +R+R++ +SF VK L + WR G +YF L+D D S+ WQ+I+ D + RI Sbjct: 242 LSAHLSIGVISPRQCVTLLFKEYPDIIHKLEECKWINE---------------LLWREFYQHLLYFYPNIGQNQSLYHWENRIKWDNNLYYLNLWKQGNTGYPIIDAGMRQLKQLGWISNRLRMITASFLVKNLLIDWRKGEEYFMSQLIDGDFASNNGNWQWIASVGTDSMPYFRI 403 HSP 2 Score: 30.8018 bits (68), Expect = 2.440e-22 Identity = 10/28 (35.71%), Postives = 20/28 (71.43%), Query Frame = 1 Query: 544 HPQFEGYKFDPNGEYVRRWLPELARLPT 627 +P + KFD N +++R+++PEL+ + T Sbjct: 405 NPMLQSKKFDINAKFIRKYIPELSNVST 432
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_RHOBA (Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.090e-21 Identity = 59/165 (35.76%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFS--WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAF 532 SP L G +S R + VR E + ++S + + R+Y R++S H + R G L+ + W D F+ W+ G TGYPLVDA MREL TG++ +R R V+SF K L + WRWG ++F L+D D+ S+ W Y +G D R F Sbjct: 250 SPWLAQGCLSPRMIADHVR------RYEEERVKNKSTYWMIFELLWRDYFRWISRKHGATLFRA--GGLRGVNVDWKSDRELFRRWQDGTTGYPLVDANMRELRTTGYMSNRGRQNVASFLTKNLGIDWRWGARWFESQLVDYDVASNYGNWNYAAGVGNDARGF 406 HSP 2 Score: 27.7202 bits (60), Expect = 1.090e-21 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 568 FDPNGEYVRRWLPELARL 621 +D GEY + WLPEL L Sbjct: 418 YDSQGEYAKHWLPELRDL 435 HSP 3 Score: 26.1794 bits (56), Expect = 1.090e-21 Identity = 10/24 (41.67%), Postives = 11/24 (45.83%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PWK Q G LG YP P+ Sbjct: 443 PWKMSPERQQEVGATLGKEYPHPI 466
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_AEDAE (Cryptochrome-1 OS=Aedes aegypti GN=cry PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.443e-20 Identity = 50/163 (30.67%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 511 +S L FG +SVR + V ++V N+ G + + + REY MS ++P+ E P+ ++ ++ D W++GRTG+P++DA MR+L A GWLH +R + ++F + L + W G+++F LLDAD A W ++S + Sbjct: 265 MSAALRFGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHIT---GQLIWREYFYTMSVHNPHYAEMEANPICLNIPWYEPKDDS--LDRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATFLTRGALWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSS 422 HSP 2 Score: 37.7354 bits (86), Expect = 2.443e-20 Identity = 15/24 (62.50%), Postives = 19/24 (79.17%), Query Frame = 1 Query: 565 KFDPNGEYVRRWLPELARLPTEWI 636 + DP GEYVRR+LPEL LPT ++ Sbjct: 442 RLDPKGEYVRRYLPELKNLPTLYV 465 HSP 3 Score: 25.0238 bits (53), Expect = 2.443e-20 Identity = 12/44 (27.27%), Postives = 18/44 (40.91%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPLKRIGAPKCGVDQTLSKCGHK 773 PWK P + G +G YP P+ + A T++ K Sbjct: 468 PWKAPLDVQKECGCIVGRDYPAPMIDLAAASRANANTMNSIRQK 511
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_SOLLC (Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.766e-20 Identity = 57/170 (33.53%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKF---------FSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526 SP L G +S R ++ V+ E + ++S L + R+Y R++S L +L F +W D+ F AWR+G+TGYPL+DA M+EL ATG++ +R R +V SF V+ + + WR G ++F LLD D S+ W Y +G D R Sbjct: 341 SPWLASGSLSPRFIYEEVK------RYEKERLSNDSTYWVLFELIWRDYFRFLSIK---------LANLLFQAGGPQKVNINWSQDQTMFDAWRRGQTGYPLIDANMKELAATGYMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPR 495 HSP 2 Score: 33.8834 bits (76), Expect = 2.766e-20 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 1 Query: 556 EGYKFDPNGEYVRRWLPELARLPTE 630 + +DP GE+V WLPEL LP E Sbjct: 505 QAQNYDPEGEFVAYWLPELRALPRE 529
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_ORYSJ (Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-19 Identity = 57/163 (34.97%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFS--WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526 SP L G +S R + V+ E + ++S L + R+Y R++S Y + LG + W D+ F++WR GRTGYPL+DA M+EL ATG++ +R R +V SF V+ + + WR G ++F LLD D S+ W Y +G D R Sbjct: 351 SPWLASGSLSPRYICEEVK------RYEKQRIANDSTYWVLFELIWRDYFRFISAK--YGNSIFHLGGPRNVESKWSQDQALFESWRDGRTGYPLIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPR 505 HSP 2 Score: 31.5722 bits (70), Expect = 1.029e-19 Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1 Query: 568 FDPNGEYVRRWLPELARLPTE 630 +DP+GEYV WLPEL + E Sbjct: 519 YDPDGEYVAYWLPELRSIAKE 539 The following BLAST results are available for this feature:
BLAST of EY711062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711062 ID=EY711062; Name=EY711062; organism=Citrus sinensis; type=EST; length=891bpback to top |